| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340241
Identifier: 146340241
GI number: 146340241
Start: 3464390
End: 3465427
Strand: Reverse
Name: 146340241
Synonym: BRADO3261
Alternate gene names: NA
Gene position: 3465427-3464390 (Counterclockwise)
Preceding gene: 146340242
Following gene: 146340240
Centisome position: 46.47
GC content: 65.8
Gene sequence:
>1038_bases ATGGCCGACATGCCCCGCCCGAGACCACCGCATCTGCAGCGCGGCGTCAGCCGCCACGGCAAGGTCTATTGGTTTGACCA GATGCGCCGCGGTGCACCGAAGACCCGGATCAGGGGGGAATACGGCTCGGCCGAGTTTATGGCCGCCTACGACGCGGCGG TGACCGGTGGCGCCGCCAAGCCGACGCCGGAGATCAAGGCGCCCAAGGGCACTCTGGAATGGGCCTGGATGCTCTACCGG CAGTCCGGAGCGTGGCAGAGCGGCCTCAGCCAGGCAACGCGGCGGCAGCGCGAGAACATCATGAAGCATGTTCTAAAAAC AGCCGCCAGCACTCCGCTGTCCGACATCGACGCAGCTGCAATCGCCGACGGCATCGACCGCCGCGCCAAGACGCCTTCTC AGGCCAAGAACTTCTTGCAGACCATGAACCAGTTTTTCGCCTGGTTGAAGCGGGCGAAGATCGTCAGCGAAAACCCCTGC GACGGCGCCGAGCTGCCGAAACGGCCGAAGACCGGCGGCTTTAAGAAATGGTCGCTGGACGACGTCGAGCTATACGAGAA GCGCTGGCCGATTGGCACCCGAGAGCGGGTGATGCTCGATGACTACATGTACACGGGTCTGCGCCGCGGTGACGCGGCCG TGGTCGGCAAGCAGCACGTCAGGAACGGGGTGATCTCGCTGCAGACAGAGAAGGCCGGCCAGTGGGTTCACATCCCGCTG CTGGACGTCCTCAAGCGGACGCTCGAGGCCGGACCGGTCGGCGACCTCGCCTGGAACGCGACGAAGTCCGGCCGGCCCTT CGCCAAGGAGTCGCTCGGTAACGCATTCAAGGATGCTTGCGTCGCAGCCGGCGTGCGCGACAAGTCGGCCCATGGCCTGC GCAAGGCAGCAGCAACGCGCGCGGCCGACAACGGCGCCACCGCGCACGAGCTGATGGCCATCTTTAGGTGGGTGGACATC AAGGAAGCCGAACTCTACACCCGCGCCGCGGACCGCAAGCGGCTGGCCGCCCAGGCGATGGGGAAGCTCGAAAAGTGA
Upstream 100 bases:
>100_bases GAGATCAAGCCAGACGGCACGATCCGGGTGCTCCTGTGTCACCCGAATCCACCGTTGCCGAGCCGGAAGGGGTTGAGGAC GAGCGTCCCGTGGTGCTCTG
Downstream 100 bases:
>100_bases ACAGGCTATGCACCCACCCTTGTGCGAGGTGGGTGCAGCAGCGCGAAAAGCGCAGCAATATCAAAGCTAGATTTTGGGCT TGGTGCGCTCGGAGGGACTC
Product: putative phage integrase/recombinase
Products: NA
Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Phage-Related Integrase/Recombinase; Phage Integrase/Recombinase; Integrase; Integrase/Recombinase Protein; Phage-Related Integrase; Phage Related Integrase; Tyrosine Recombinase; Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family Protein
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MADMPRPRPPHLQRGVSRHGKVYWFDQMRRGAPKTRIRGEYGSAEFMAAYDAAVTGGAAKPTPEIKAPKGTLEWAWMLYR QSGAWQSGLSQATRRQRENIMKHVLKTAASTPLSDIDAAAIADGIDRRAKTPSQAKNFLQTMNQFFAWLKRAKIVSENPC DGAELPKRPKTGGFKKWSLDDVELYEKRWPIGTRERVMLDDYMYTGLRRGDAAVVGKQHVRNGVISLQTEKAGQWVHIPL LDVLKRTLEAGPVGDLAWNATKSGRPFAKESLGNAFKDACVAAGVRDKSAHGLRKAAATRAADNGATAHELMAIFRWVDI KEAELYTRAADRKRLAAQAMGKLEK
Sequences:
>Translated_345_residues MADMPRPRPPHLQRGVSRHGKVYWFDQMRRGAPKTRIRGEYGSAEFMAAYDAAVTGGAAKPTPEIKAPKGTLEWAWMLYR QSGAWQSGLSQATRRQRENIMKHVLKTAASTPLSDIDAAAIADGIDRRAKTPSQAKNFLQTMNQFFAWLKRAKIVSENPC DGAELPKRPKTGGFKKWSLDDVELYEKRWPIGTRERVMLDDYMYTGLRRGDAAVVGKQHVRNGVISLQTEKAGQWVHIPL LDVLKRTLEAGPVGDLAWNATKSGRPFAKESLGNAFKDACVAAGVRDKSAHGLRKAAATRAADNGATAHELMAIFRWVDI KEAELYTRAADRKRLAAQAMGKLEK >Mature_344_residues ADMPRPRPPHLQRGVSRHGKVYWFDQMRRGAPKTRIRGEYGSAEFMAAYDAAVTGGAAKPTPEIKAPKGTLEWAWMLYRQ SGAWQSGLSQATRRQRENIMKHVLKTAASTPLSDIDAAAIADGIDRRAKTPSQAKNFLQTMNQFFAWLKRAKIVSENPCD GAELPKRPKTGGFKKWSLDDVELYEKRWPIGTRERVMLDDYMYTGLRRGDAAVVGKQHVRNGVISLQTEKAGQWVHIPLL DVLKRTLEAGPVGDLAWNATKSGRPFAKESLGNAFKDACVAAGVRDKSAHGLRKAAATRAADNGATAHELMAIFRWVDIK EAELYTRAADRKRLAAQAMGKLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38339; Mature: 38208
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMPRPRPPHLQRGVSRHGKVYWFDQMRRGAPKTRIRGEYGSAEFMAAYDAAVTGGAAK CCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PTPEIKAPKGTLEWAWMLYRQSGAWQSGLSQATRRQRENIMKHVLKTAASTPLSDIDAAA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IADGIDRRAKTPSQAKNFLQTMNQFFAWLKRAKIVSENPCDGAELPKRPKTGGFKKWSLD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DVELYEKRWPIGTRERVMLDDYMYTGLRRGDAAVVGKQHVRNGVISLQTEKAGQWVHIPL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECH LDVLKRTLEAGPVGDLAWNATKSGRPFAKESLGNAFKDACVAAGVRDKSAHGLRKAAATR HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AADNGATAHELMAIFRWVDIKEAELYTRAADRKRLAAQAMGKLEK CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADMPRPRPPHLQRGVSRHGKVYWFDQMRRGAPKTRIRGEYGSAEFMAAYDAAVTGGAAK CCCCCCCCCHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PTPEIKAPKGTLEWAWMLYRQSGAWQSGLSQATRRQRENIMKHVLKTAASTPLSDIDAAA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IADGIDRRAKTPSQAKNFLQTMNQFFAWLKRAKIVSENPCDGAELPKRPKTGGFKKWSLD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DVELYEKRWPIGTRERVMLDDYMYTGLRRGDAAVVGKQHVRNGVISLQTEKAGQWVHIPL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECH LDVLKRTLEAGPVGDLAWNATKSGRPFAKESLGNAFKDACVAAGVRDKSAHGLRKAAATR HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AADNGATAHELMAIFRWVDIKEAELYTRAADRKRLAAQAMGKLEK CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA