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The map label for this gene is yciF [H]

Identifier: 146340220

GI number: 146340220

Start: 3441795

End: 3442289

Strand: Direct

Name: yciF [H]

Synonym: BRADO3239

Alternate gene names: 146340220

Gene position: 3441795-3442289 (Clockwise)

Preceding gene: 146340218

Following gene: 146340228

Centisome position: 46.16

GC content: 61.62

Gene sequence:

>495_bases
ATGGCTGCAGACAAAGACCTCAACGAACTCTTCCTCGATACGCTGAAGGACATCTACTACGCCGAGAAGCAGATCCTGAA
GAATCTGCCGAAGATGGCCAAGGCGGCGCAGTCGCAGAAGCTGTCAGCGGCGTTTGAGAAGCACCAGGAGGAGACCGAGG
GCCAGATCGAGCGCCTGGAGCAGATCTTCGAGCTGCTCGGCAAGCCCGCGCGCGGCAAGCGTTGCGATGCGATCGAGGGC
ATCCTCGACGAGGGCAAGGAGATCATGACGGAGTACAAGGGCACGTCGGCGCTCGATGCCGGCCTGCTGGCTGCGGCGCA
GGCCGTCGAGCACTACGAGATCTCGCGCTACGGCACCTTGAAGTCCTGGGCCAACAAGCTCGAACTCAAGCAGGCCGTCA
AGCTGCTCGACCAGACCCTGAACGAGGAGAAGAAGACCGACGATCTCCTGACCAAGGTCGCCGAGAGCGAGGTCAACTAC
GAGGCGGCTGCCTGA

Upstream 100 bases:

>100_bases
GGCCGGCTCGCGACAGGAATTTCGCGCGGCGGTAGTCCCTTGCAGGAACCTGGGTGTGGCTTTCCGGTTGTCGGCTCGCA
ACAACCCCAGGGAGCACACC

Downstream 100 bases:

>100_bases
TCACCGCGCACGCTCTACCCTTGAATGGCCGCCGCTAGTGCTGCAATCAGCGCTGGCGGCGTTGCCACGAGTCCGATCTT
GAGAAATTGCCAGGCCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MAADKDLNELFLDTLKDIYYAEKQILKNLPKMAKAAQSQKLSAAFEKHQEETEGQIERLEQIFELLGKPARGKRCDAIEG
ILDEGKEIMTEYKGTSALDAGLLAAAQAVEHYEISRYGTLKSWANKLELKQAVKLLDQTLNEEKKTDDLLTKVAESEVNY
EAAA

Sequences:

>Translated_164_residues
MAADKDLNELFLDTLKDIYYAEKQILKNLPKMAKAAQSQKLSAAFEKHQEETEGQIERLEQIFELLGKPARGKRCDAIEG
ILDEGKEIMTEYKGTSALDAGLLAAAQAVEHYEISRYGTLKSWANKLELKQAVKLLDQTLNEEKKTDDLLTKVAESEVNY
EAAA
>Mature_163_residues
AADKDLNELFLDTLKDIYYAEKQILKNLPKMAKAAQSQKLSAAFEKHQEETEGQIERLEQIFELLGKPARGKRCDAIEGI
LDEGKEIMTEYKGTSALDAGLLAAAQAVEHYEISRYGTLKSWANKLELKQAVKLLDQTLNEEKKTDDLLTKVAESEVNYE
AAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=159, Percent_Identity=44.6540880503145, Blast_Score=130, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18379; Mature: 18248

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADKDLNELFLDTLKDIYYAEKQILKNLPKMAKAAQSQKLSAAFEKHQEETEGQIERLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIFELLGKPARGKRCDAIEGILDEGKEIMTEYKGTSALDAGLLAAAQAVEHYEISRYGTL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KSWANKLELKQAVKLLDQTLNEEKKTDDLLTKVAESEVNYEAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AADKDLNELFLDTLKDIYYAEKQILKNLPKMAKAAQSQKLSAAFEKHQEETEGQIERLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIFELLGKPARGKRCDAIEGILDEGKEIMTEYKGTSALDAGLLAAAQAVEHYEISRYGTL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KSWANKLELKQAVKLLDQTLNEEKKTDDLLTKVAESEVNYEAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]