| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340228
Identifier: 146340228
GI number: 146340228
Start: 3452029
End: 3453156
Strand: Direct
Name: 146340228
Synonym: BRADO3247
Alternate gene names: NA
Gene position: 3452029-3453156 (Clockwise)
Preceding gene: 146340220
Following gene: 146340229
Centisome position: 46.3
GC content: 64.01
Gene sequence:
>1128_bases GTGAAGCTCTTCGTCTGTCAGGCCTGCAAGAACATCCTGTATTTCGAGAACCGCAGCTGCGGACGCTGCGGCCATCAGCT CGCGTTCATGCCGGAGAGCCAGACGCTGTCGGCGATCGAGCCGGCCGACGACGGCTTTCGCACGCTGGCCGACGGCAAGA CCGGACGGTTCTTCTGCGCGAATGCCGAGCATGACGCCTGCAACTGGCTGCTCGAGATCGGCGAGACCGCAGGATTCTGC CGCGCCTGCCGGCACAATGGCACCATCCCCAATCTGTCCGACCCGGCGCAACTTGCCGGTTGGCGCGAACTGGAGGTGGC CAAGCACCGGCTGCTGTATTCGCTGATCCGCTGGAAGCTGCCGCTGAAAACGCGGATCGAGGATCCGCAGCACGGGCTGA TCTTCAACTTCCTGGCCGATGATCCCACCGGCCAGCAGAAGGTTATGACCGGTCACGACAACGGCCTGATCACGATCGCG CTCGCCGAAGCCGACGACATCGAGCGCGAGCGCCGCCGGCTGGAGATGGACGAGCCGTACCGCACCTTGCTCGGGCATTT CCGCCACGAGGTCGGGCATTATTTCTGGGACGTGCTGGTGCGCGATGCCGGCAGGCTCGACGCCTGCCGCGCCGTGTTCG GCGACGACAGCCAGGATTATGGTGAGGCGCTGAAGCGCCACTACGATCAGGGCGCCCCGGCGAATTGGCAGGACAATTTC GTCTCGGCCTATGCGACAACCCATCCCTGGGAAGACTTCGCCGAGACCTGGGCGCACTATCTGCACATCGTCGACACGCT GGAAATGGCCTCCGAGTTCGGCATCGAGATCGATCCGCCGGCTGACCAGATCGGCGGGCTGACCGCGCGGGTCACCTTCG ATCCGTATGTGGTCAAAGACATCGATAGGATCGTCAATGCCTGGCTGCCGTTCACCTTCGCCATGAATAGCGTGGCCCGG GCGATGGGCGCGCGCGATCTCTATCCCTTTATCCTGACGCCTCCCGTCATCGAAAAGCTCGGCTTCATCCATGAGCTGGT GCGCCATGGCGCGCTGCAGACCACGACGGCGCCTCTGGCGCCGGAAAAGCCGCAGGCCGAACAGAAGGAGGAGGCCGGGG CGGTATGA
Upstream 100 bases:
>100_bases GTGAACGTCGAGGCAGATAAAAAGTTCCGCAGCGGCGGAACGGACTGTTACTGTCGTGCGTCGTCAGGCGCTGAACAACC GCAACACGTAGGTCCATACC
Downstream 100 bases:
>100_bases ACCCGGCCTTGACTCCTGAGAACATAAAGTGAACAAAGGCGGTCGCAGATATCGACCAGGGCGATCCTCCGATGCCGACC CAAGCCCGCTCAACTCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKLFVCQACKNILYFENRSCGRCGHQLAFMPESQTLSAIEPADDGFRTLADGKTGRFFCANAEHDACNWLLEIGETAGFC RACRHNGTIPNLSDPAQLAGWRELEVAKHRLLYSLIRWKLPLKTRIEDPQHGLIFNFLADDPTGQQKVMTGHDNGLITIA LAEADDIERERRRLEMDEPYRTLLGHFRHEVGHYFWDVLVRDAGRLDACRAVFGDDSQDYGEALKRHYDQGAPANWQDNF VSAYATTHPWEDFAETWAHYLHIVDTLEMASEFGIEIDPPADQIGGLTARVTFDPYVVKDIDRIVNAWLPFTFAMNSVAR AMGARDLYPFILTPPVIEKLGFIHELVRHGALQTTTAPLAPEKPQAEQKEEAGAV
Sequences:
>Translated_375_residues MKLFVCQACKNILYFENRSCGRCGHQLAFMPESQTLSAIEPADDGFRTLADGKTGRFFCANAEHDACNWLLEIGETAGFC RACRHNGTIPNLSDPAQLAGWRELEVAKHRLLYSLIRWKLPLKTRIEDPQHGLIFNFLADDPTGQQKVMTGHDNGLITIA LAEADDIERERRRLEMDEPYRTLLGHFRHEVGHYFWDVLVRDAGRLDACRAVFGDDSQDYGEALKRHYDQGAPANWQDNF VSAYATTHPWEDFAETWAHYLHIVDTLEMASEFGIEIDPPADQIGGLTARVTFDPYVVKDIDRIVNAWLPFTFAMNSVAR AMGARDLYPFILTPPVIEKLGFIHELVRHGALQTTTAPLAPEKPQAEQKEEAGAV >Mature_375_residues MKLFVCQACKNILYFENRSCGRCGHQLAFMPESQTLSAIEPADDGFRTLADGKTGRFFCANAEHDACNWLLEIGETAGFC RACRHNGTIPNLSDPAQLAGWRELEVAKHRLLYSLIRWKLPLKTRIEDPQHGLIFNFLADDPTGQQKVMTGHDNGLITIA LAEADDIERERRRLEMDEPYRTLLGHFRHEVGHYFWDVLVRDAGRLDACRAVFGDDSQDYGEALKRHYDQGAPANWQDNF VSAYATTHPWEDFAETWAHYLHIVDTLEMASEFGIEIDPPADQIGGLTARVTFDPYVVKDIDRIVNAWLPFTFAMNSVAR AMGARDLYPFILTPPVIEKLGFIHELVRHGALQTTTAPLAPEKPQAEQKEEAGAV
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 42344; Mature: 42344
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFVCQACKNILYFENRSCGRCGHQLAFMPESQTLSAIEPADDGFRTLADGKTGRFFCA CCEEHHHHHHHHHEECCCCHHCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEE NAEHDACNWLLEIGETAGFCRACRHNGTIPNLSDPAQLAGWRELEVAKHRLLYSLIRWKL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC PLKTRIEDPQHGLIFNFLADDPTGQQKVMTGHDNGLITIALAEADDIERERRRLEMDEPY CHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHH RTLLGHFRHEVGHYFWDVLVRDAGRLDACRAVFGDDSQDYGEALKRHYDQGAPANWQDNF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHH VSAYATTHPWEDFAETWAHYLHIVDTLEMASEFGIEIDPPADQIGGLTARVTFDPYVVKD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCHHHHH IDRIVNAWLPFTFAMNSVARAMGARDLYPFILTPPVIEKLGFIHELVRHGALQTTTAPLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC PEKPQAEQKEEAGAV CCCCCHHHHHHCCCC >Mature Secondary Structure MKLFVCQACKNILYFENRSCGRCGHQLAFMPESQTLSAIEPADDGFRTLADGKTGRFFCA CCEEHHHHHHHHHEECCCCHHCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEE NAEHDACNWLLEIGETAGFCRACRHNGTIPNLSDPAQLAGWRELEVAKHRLLYSLIRWKL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC PLKTRIEDPQHGLIFNFLADDPTGQQKVMTGHDNGLITIALAEADDIERERRRLEMDEPY CHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHH RTLLGHFRHEVGHYFWDVLVRDAGRLDACRAVFGDDSQDYGEALKRHYDQGAPANWQDNF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHH VSAYATTHPWEDFAETWAHYLHIVDTLEMASEFGIEIDPPADQIGGLTARVTFDPYVVKD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCHHHHH IDRIVNAWLPFTFAMNSVARAMGARDLYPFILTPPVIEKLGFIHELVRHGALQTTTAPLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC PEKPQAEQKEEAGAV CCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]