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The map label for this gene is ycjO [C]

Identifier: 146340098

GI number: 146340098

Start: 3304618

End: 3305505

Strand: Direct

Name: ycjO [C]

Synonym: BRADO3107

Alternate gene names: 146340098

Gene position: 3304618-3305505 (Clockwise)

Preceding gene: 146340097

Following gene: 146340099

Centisome position: 44.32

GC content: 62.39

Gene sequence:

>888_bases
TTGAAGGCGAACCGCAACTTCGTCGCGTTGTGGTTCATGCTGCCCGCGGCGGCGTTCCTGATCCTGTTCCTGGCCTATCC
GCTCGGCCTCGGCGTCTGGATGAGCTTCACCGACGAGAAGATCGGCCGCAGCGGCGTCTTCGTCGGGATCGAGAACTACG
AATGGCTGTGGGACGATTCGATCTTCTGGCTGTCGGTGTTCAACACGCTGCTCTACACGATCGTGGCGTCCGCCATCAAA
TTCGCCATTGGCCTCTATCTCGCGCTGCTGCTGAACCGGCACATGCCGTTCAAGGCGATGATCCGCGCCATCGTGCTGAT
CCCCTTCATCGTGCCCACGGTGCTGTCGGCGATCGCATTCTGGTGGATCTATGACGCGCAGTTCTCGATCATCTCCTGGT
CGTTGATCAAGCTCGGCCTGATCACTCAGAACATCAACTTCCTCGGCGACACCTCCTGGGCGCGCGCCTCGGTCATCATC
GCCAACATCTGGCGCGGCGTGCCGTTCGTCGCGATCACCTTGCTCGCCGGCCTGCAGACCGTGTCGCCCTCGCTGTACGA
GGCGGCGACGCTCGACGGCGCCACCAGCTGGCAGCGCTTCCGCTACATCACTTATCCGCTGCTGACCCCGATCATCGCGG
TCGTGATGACGTTCTCGGTGCTGTTCACCTTCACCGATTTCCAACTGATCTGGGCGCTGACCCGCGGCGGTCCGGTCAAT
GCCACGCACCTGATGGCGACGCTCAGCTATCAGCGCGGCATCATCTCGGGCCGGCTCGGCGAGGGCGCCGCGATCGCCAC
CGCCATGATTCCATTCCTGATGGCGGCGATCGCGATCTCCTGGTTCGGCATGCAACGGCGCAAATGGCAGCAAGGATCCG
ACCAATGA

Upstream 100 bases:

>100_bases
CTACGGATCCGTCGCGAAGGGAGCTGCTCGAAGAATGAGTACCATCCAGACCTCGATGCCTCCGGGCGCCGCCATGGGCG
AGCCGTCGGCATGGGCGCGC

Downstream 100 bases:

>100_bases
CCGACACCGCCGCGCTGCAATCCAAGACCCCATCGAACGCCACCGCGACCGCGGCCAAGCTCGCCGCCGGCGACGACTCG
GAGGGCATGAGCTATCTCGA

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKANRNFVALWFMLPAAAFLILFLAYPLGLGVWMSFTDEKIGRSGVFVGIENYEWLWDDSIFWLSVFNTLLYTIVASAIK
FAIGLYLALLLNRHMPFKAMIRAIVLIPFIVPTVLSAIAFWWIYDAQFSIISWSLIKLGLITQNINFLGDTSWARASVII
ANIWRGVPFVAITLLAGLQTVSPSLYEAATLDGATSWQRFRYITYPLLTPIIAVVMTFSVLFTFTDFQLIWALTRGGPVN
ATHLMATLSYQRGIISGRLGEGAAIATAMIPFLMAAIAISWFGMQRRKWQQGSDQ

Sequences:

>Translated_295_residues
MKANRNFVALWFMLPAAAFLILFLAYPLGLGVWMSFTDEKIGRSGVFVGIENYEWLWDDSIFWLSVFNTLLYTIVASAIK
FAIGLYLALLLNRHMPFKAMIRAIVLIPFIVPTVLSAIAFWWIYDAQFSIISWSLIKLGLITQNINFLGDTSWARASVII
ANIWRGVPFVAITLLAGLQTVSPSLYEAATLDGATSWQRFRYITYPLLTPIIAVVMTFSVLFTFTDFQLIWALTRGGPVN
ATHLMATLSYQRGIISGRLGEGAAIATAMIPFLMAAIAISWFGMQRRKWQQGSDQ
>Mature_295_residues
MKANRNFVALWFMLPAAAFLILFLAYPLGLGVWMSFTDEKIGRSGVFVGIENYEWLWDDSIFWLSVFNTLLYTIVASAIK
FAIGLYLALLLNRHMPFKAMIRAIVLIPFIVPTVLSAIAFWWIYDAQFSIISWSLIKLGLITQNINFLGDTSWARASVII
ANIWRGVPFVAITLLAGLQTVSPSLYEAATLDGATSWQRFRYITYPLLTPIIAVVMTFSVLFTFTDFQLIWALTRGGPVN
ATHLMATLSYQRGIISGRLGEGAAIATAMIPFLMAAIAISWFGMQRRKWQQGSDQ

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=28.4615384615385, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790465, Length=270, Percent_Identity=30, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789861, Length=276, Percent_Identity=25.3623188405797, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33117; Mature: 33117

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANRNFVALWFMLPAAAFLILFLAYPLGLGVWMSFTDEKIGRSGVFVGIENYEWLWDDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCC
IFWLSVFNTLLYTIVASAIKFAIGLYLALLLNRHMPFKAMIRAIVLIPFIVPTVLSAIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WWIYDAQFSIISWSLIKLGLITQNINFLGDTSWARASVIIANIWRGVPFVAITLLAGLQT
HHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VSPSLYEAATLDGATSWQRFRYITYPLLTPIIAVVMTFSVLFTFTDFQLIWALTRGGPVN
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ATHLMATLSYQRGIISGRLGEGAAIATAMIPFLMAAIAISWFGMQRRKWQQGSDQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKANRNFVALWFMLPAAAFLILFLAYPLGLGVWMSFTDEKIGRSGVFVGIENYEWLWDDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCC
IFWLSVFNTLLYTIVASAIKFAIGLYLALLLNRHMPFKAMIRAIVLIPFIVPTVLSAIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WWIYDAQFSIISWSLIKLGLITQNINFLGDTSWARASVIIANIWRGVPFVAITLLAGLQT
HHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VSPSLYEAATLDGATSWQRFRYITYPLLTPIIAVVMTFSVLFTFTDFQLIWALTRGGPVN
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ATHLMATLSYQRGIISGRLGEGAAIATAMIPFLMAAIAISWFGMQRRKWQQGSDQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]