Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146340097

Identifier: 146340097

GI number: 146340097

Start: 3302888

End: 3304210

Strand: Direct

Name: 146340097

Synonym: BRADO3106

Alternate gene names: NA

Gene position: 3302888-3304210 (Clockwise)

Preceding gene: 146340096

Following gene: 146340098

Centisome position: 44.29

GC content: 64.85

Gene sequence:

>1323_bases
ATGACGAAATTCCTCACGGATCGACGGTCTCTGCTCAAGGGCGGCGCGACCTTGATGGCGGCGGCGGCGACGATGTCGGC
CGACGAACTGCTCGGCTACGCCAAGGCCTGGGCGCAGACCTCGCCCTGGAAGCCGGAGCCCGGCGCCAAGGTCAACATGA
TGCGCTGGAAGCGCTTCGTCGAGGCCGAGGACGTGGCCTTCATGAAGATCGTCGACGCCTTCCAGAAGGCCAATAACGTC
ACCATCAATATCTCCAACGAATCCTATGACGACGTCCAGCCCAAGGCCTCGGTCGCGGCCAATACCGGGCAGGGGCTCGA
CATGGTGTGGGGCCTCTACACGCTGCCCTTCCTGTTCTCCAACAAATGCGTGGATATGACCGACGTCGCCGACTACCTCG
GCAAGAAGTGCGGCGGCTGGACCGACTCCGGCAAGGCCTACGGCATGCTCGACGGCAAGTGGATCGGCATTCCCGTGGCG
GCCACCGGCGGCCTGATCAACTACCGCGTGGCCGCGGCCGAGAAGGCCGGCTTCAAGGAGTTTCCGAAGGACCTGGCCGG
CATGTCCGAGTTCTTCAAGGCGATGAACAAGAACGGCACGCCCGGCGGCATGGCGCTCGGCCACGCCTCGGGCGACGCCA
ATGGCTGGGTGCACTGGGCGCTGTGGGCGCATGGCGGCAACCTGATCGACAAGGACAACAAGGTCGTCATCAACTCGCCG
GAGACCGCCAAGGCGCTCGAATACGTCAAGGGCCTGTACGACAATTTCGTGCCGGGCACCGCGTCGTGGAACGACTCCTC
GAACAACAAGGCGTTCCTGGCCGGCCAGCTCTACACCACCGTCAACGGCATCTCGATCTACGTCACCGCCAAGAAGGAGG
CGCCGCAGATCGCCGAGGACATGAACCACGCGCATCTGCCGCCCGGCCTGGACGGCAAGACCCGCGAGATGCATCTCGGC
TTCCCGATCCTGGTGTTCAACTTCTCCAAGTACCCGCAGACCTGCAAGGCGTTCACCGCCTTCATGCTGGAGCCGGAGCA
GTTCAACCCATGGATCGAGGCGGCGCAGGGCTATCTCTCGCACTTCCTCAAAGGCTACGACGCCAACCCGATCTGGACGG
CCGATCCGAAGAACACGCCGTATCGCGACGTCGCCGCCACCGCGACCACGCCGGCCGGCGTCGGCAAGCTCGGCGAGGCG
GCGGCTGCCGCGATCGCCGACTTCGTCCTGGTCGACATGTTCGCGAACTACTGCACCGGCCGCGAGGACGTGAAGACGGC
GATGGCGAGCGCCGAGCGGTCCGCCAAGCGCATCTTCCGCTGA

Upstream 100 bases:

>100_bases
GATCCGGCCGCGCGGCGCGGACTGACCAAGCAGACCAATTAAAAAGGCCGGAAAACCGGCAAAAAACAAACAAGCAAGAG
TCAACGGGAGAAAACTTCAG

Downstream 100 bases:

>100_bases
GCCGCGGCTACGTAGGGTGGGCAAAGGCGCGCCGGGATAGAGGAGAAATCCCGGATCTCTCCCGCGCCGTGCCCACCGAG
TTTGTCGCACCACCGAATGG

Product: putative ABC transporter periplasmic-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MTKFLTDRRSLLKGGATLMAAAATMSADELLGYAKAWAQTSPWKPEPGAKVNMMRWKRFVEAEDVAFMKIVDAFQKANNV
TINISNESYDDVQPKASVAANTGQGLDMVWGLYTLPFLFSNKCVDMTDVADYLGKKCGGWTDSGKAYGMLDGKWIGIPVA
ATGGLINYRVAAAEKAGFKEFPKDLAGMSEFFKAMNKNGTPGGMALGHASGDANGWVHWALWAHGGNLIDKDNKVVINSP
ETAKALEYVKGLYDNFVPGTASWNDSSNNKAFLAGQLYTTVNGISIYVTAKKEAPQIAEDMNHAHLPPGLDGKTREMHLG
FPILVFNFSKYPQTCKAFTAFMLEPEQFNPWIEAAQGYLSHFLKGYDANPIWTADPKNTPYRDVAATATTPAGVGKLGEA
AAAAIADFVLVDMFANYCTGREDVKTAMASAERSAKRIFR

Sequences:

>Translated_440_residues
MTKFLTDRRSLLKGGATLMAAAATMSADELLGYAKAWAQTSPWKPEPGAKVNMMRWKRFVEAEDVAFMKIVDAFQKANNV
TINISNESYDDVQPKASVAANTGQGLDMVWGLYTLPFLFSNKCVDMTDVADYLGKKCGGWTDSGKAYGMLDGKWIGIPVA
ATGGLINYRVAAAEKAGFKEFPKDLAGMSEFFKAMNKNGTPGGMALGHASGDANGWVHWALWAHGGNLIDKDNKVVINSP
ETAKALEYVKGLYDNFVPGTASWNDSSNNKAFLAGQLYTTVNGISIYVTAKKEAPQIAEDMNHAHLPPGLDGKTREMHLG
FPILVFNFSKYPQTCKAFTAFMLEPEQFNPWIEAAQGYLSHFLKGYDANPIWTADPKNTPYRDVAATATTPAGVGKLGEA
AAAAIADFVLVDMFANYCTGREDVKTAMASAERSAKRIFR
>Mature_439_residues
TKFLTDRRSLLKGGATLMAAAATMSADELLGYAKAWAQTSPWKPEPGAKVNMMRWKRFVEAEDVAFMKIVDAFQKANNVT
INISNESYDDVQPKASVAANTGQGLDMVWGLYTLPFLFSNKCVDMTDVADYLGKKCGGWTDSGKAYGMLDGKWIGIPVAA
TGGLINYRVAAAEKAGFKEFPKDLAGMSEFFKAMNKNGTPGGMALGHASGDANGWVHWALWAHGGNLIDKDNKVVINSPE
TAKALEYVKGLYDNFVPGTASWNDSSNNKAFLAGQLYTTVNGISIYVTAKKEAPQIAEDMNHAHLPPGLDGKTREMHLGF
PILVFNFSKYPQTCKAFTAFMLEPEQFNPWIEAAQGYLSHFLKGYDANPIWTADPKNTPYRDVAATATTPAGVGKLGEAA
AAAIADFVLVDMFANYCTGREDVKTAMASAERSAKRIFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47808; Mature: 47677

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFLTDRRSLLKGGATLMAAAATMSADELLGYAKAWAQTSPWKPEPGAKVNMMRWKRFV
CCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHH
EAEDVAFMKIVDAFQKANNVTINISNESYDDVQPKASVAANTGQGLDMVWGLYTLPFLFS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHC
NKCVDMTDVADYLGKKCGGWTDSGKAYGMLDGKWIGIPVAATGGLINYRVAAAEKAGFKE
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEECCCCEEEEEEHHHHHCCHHH
FPKDLAGMSEFFKAMNKNGTPGGMALGHASGDANGWVHWALWAHGGNLIDKDNKVVINSP
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCEECCCCEEEEECC
ETAKALEYVKGLYDNFVPGTASWNDSSNNKAFLAGQLYTTVNGISIYVTAKKEAPQIAED
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCHHHHH
MNHAHLPPGLDGKTREMHLGFPILVFNFSKYPQTCKAFTAFMLEPEQFNPWIEAAQGYLS
CCCCCCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHCCHHHHHHHHHHH
HFLKGYDANPIWTADPKNTPYRDVAATATTPAGVGKLGEAAAAAIADFVLVDMFANYCTG
HHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
REDVKTAMASAERSAKRIFR
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKFLTDRRSLLKGGATLMAAAATMSADELLGYAKAWAQTSPWKPEPGAKVNMMRWKRFV
CCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHH
EAEDVAFMKIVDAFQKANNVTINISNESYDDVQPKASVAANTGQGLDMVWGLYTLPFLFS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHC
NKCVDMTDVADYLGKKCGGWTDSGKAYGMLDGKWIGIPVAATGGLINYRVAAAEKAGFKE
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEECCCCEEEEEEHHHHHCCHHH
FPKDLAGMSEFFKAMNKNGTPGGMALGHASGDANGWVHWALWAHGGNLIDKDNKVVINSP
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCEECCCCEEEEECC
ETAKALEYVKGLYDNFVPGTASWNDSSNNKAFLAGQLYTTVNGISIYVTAKKEAPQIAED
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCHHHHH
MNHAHLPPGLDGKTREMHLGFPILVFNFSKYPQTCKAFTAFMLEPEQFNPWIEAAQGYLS
CCCCCCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHCCHHHHHHHHHHH
HFLKGYDANPIWTADPKNTPYRDVAATATTPAGVGKLGEAAAAAIADFVLVDMFANYCTG
HHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
REDVKTAMASAERSAKRIFR
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA