| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is adk [H]
Identifier: 146340078
GI number: 146340078
Start: 3284126
End: 3285007
Strand: Direct
Name: adk [H]
Synonym: BRADO3087
Alternate gene names: 146340078
Gene position: 3284126-3285007 (Clockwise)
Preceding gene: 146340077
Following gene: 146340079
Centisome position: 44.04
GC content: 66.1
Gene sequence:
>882_bases ATGAGACTCATTCTCTTGGGACCGCCCGGTTCGGGCAAGGGCACGCAGGCGCAGCGTCTGGTGCAGCAATATGGTATCGT CCAGCTCTCGACCGGCGACATGCTGCGCGCCGCGGTCGCGGCGCAGACGCCGATCGGGCTGAAGGCCAAGGACATCATGG CCGCCGGCGGCCTGGTGCCGGACGAGGTCGTGGTCGGCATCATCGCCGACCGGATCGAGCAGCCTGACGCGGCCAATGGC TTCATCCTGGACGGCTTCCCGCGCACGGTGCCGCAGGCCGAGGCGCTGGATGCGCTGCTCAAGCAGAAGCAGATGAATCT CGACGCGGTCATCGAGCTCCGGGTCAACGAGGGTGTGCTGCTGGAGCGCGTCGAGCGCCGCGCTGCCGAAACCCGCGCCC GCGGTGAGGCGGTGCGCGCCGATGACACTCCCGAGGTGTTGACCAAGCGGCTGCACAGCTATCGCGACCAGACCGAGCCG CTGATCCACTATTATTCCGACCACCGGATGCTGGCGACTGTCGACGGCATGATGCCGATCGAAGAGGTCACCGAGGAGAT CGGCCGGATCCTGGCTGCGGTGGGCAAGAGCGCGGGCAGCCGGGCGGCCAAGAAGGCGAGCCCCGCCAAGCGCAGCGCCA AGACGGCGGCCCCACCTAAGGCGGCCAAAAAGGCGGCCAAGAGGGCGTCCAAGACCGCCGCGCCCGCCAAGAAAGCGGCC AAGAAGGCTGCCAAGCCGGCTAAAACCGCCAAGAAGGCGGCCAAGACCGTGAAAAAGACCGTGAAAAAGGCCGCGAAGAA GTCCTCCAAGGCCGCTGCCAAGGCGACCAAGGGAACCCGGAAAACCTCTTCAAAATCTGCAAAAAAGCGCAGCAAGGGGT GA
Upstream 100 bases:
>100_bases CGCCGCCGCTGACAGCGGCGGATCGCGGCCCGGGAACCAAAAAGCCAAGAACAAGGTGTGCGGGAGGATCGCTCACCGTG TGCCGGGGGGCGAAATTTAG
Downstream 100 bases:
>100_bases CCGAATCTTCTAGGAGCGGTTGACGACCGCCGTGTGAATCCATTAATAAGCCCGCATCCAAGTCGGATAGTTTTCCAAAG ATGCCGGGCCCCACGAATCG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRLILLGPPGSGKGTQAQRLVQQYGIVQLSTGDMLRAAVAAQTPIGLKAKDIMAAGGLVPDEVVVGIIADRIEQPDAANG FILDGFPRTVPQAEALDALLKQKQMNLDAVIELRVNEGVLLERVERRAAETRARGEAVRADDTPEVLTKRLHSYRDQTEP LIHYYSDHRMLATVDGMMPIEEVTEEIGRILAAVGKSAGSRAAKKASPAKRSAKTAAPPKAAKKAAKRASKTAAPAKKAA KKAAKPAKTAKKAAKTVKKTVKKAAKKSSKAAAKATKGTRKTSSKSAKKRSKG
Sequences:
>Translated_293_residues MRLILLGPPGSGKGTQAQRLVQQYGIVQLSTGDMLRAAVAAQTPIGLKAKDIMAAGGLVPDEVVVGIIADRIEQPDAANG FILDGFPRTVPQAEALDALLKQKQMNLDAVIELRVNEGVLLERVERRAAETRARGEAVRADDTPEVLTKRLHSYRDQTEP LIHYYSDHRMLATVDGMMPIEEVTEEIGRILAAVGKSAGSRAAKKASPAKRSAKTAAPPKAAKKAAKRASKTAAPAKKAA KKAAKPAKTAKKAAKTVKKTVKKAAKKSSKAAAKATKGTRKTSSKSAKKRSKG >Mature_293_residues MRLILLGPPGSGKGTQAQRLVQQYGIVQLSTGDMLRAAVAAQTPIGLKAKDIMAAGGLVPDEVVVGIIADRIEQPDAANG FILDGFPRTVPQAEALDALLKQKQMNLDAVIELRVNEGVLLERVERRAAETRARGEAVRADDTPEVLTKRLHSYRDQTEP LIHYYSDHRMLATVDGMMPIEEVTEEIGRILAAVGKSAGSRAAKKASPAKRSAKTAAPPKAAKKAAKRASKTAAPAKKAA KKAAKPAKTAKKAAKTVKKTVKKAAKKSSKAAAKATKGTRKTSSKSAKKRSKG
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=196, Percent_Identity=41.8367346938776, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI4502013, Length=196, Percent_Identity=41.8367346938776, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI19923437, Length=197, Percent_Identity=34.5177664974619, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI4502011, Length=195, Percent_Identity=33.8461538461538, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI310110345, Length=197, Percent_Identity=34.010152284264, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI53832003, Length=197, Percent_Identity=34.010152284264, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI8051579, Length=197, Percent_Identity=34.010152284264, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI53832001, Length=197, Percent_Identity=34.010152284264, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI28144899, Length=164, Percent_Identity=32.3170731707317, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI7706497, Length=198, Percent_Identity=29.2929292929293, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI28144897, Length=164, Percent_Identity=32.3170731707317, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI22749187, Length=127, Percent_Identity=34.6456692913386, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI1786680, Length=218, Percent_Identity=44.4954128440367, Blast_Score=166, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17552384, Length=213, Percent_Identity=39.4366197183099, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17567503, Length=185, Percent_Identity=32.4324324324324, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17550688, Length=192, Percent_Identity=31.7708333333333, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17533833, Length=195, Percent_Identity=28.2051282051282, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537943, Length=200, Percent_Identity=28.5, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25147457, Length=193, Percent_Identity=24.3523316062176, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320432, Length=209, Percent_Identity=41.1483253588517, Blast_Score=159, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6321018, Length=197, Percent_Identity=38.0710659898477, Blast_Score=123, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6322828, Length=188, Percent_Identity=29.7872340425532, Blast_Score=96, Evalue=9e-21, Organism=Drosophila melanogaster, GI22026816, Length=183, Percent_Identity=44.8087431693989, Blast_Score=161, Evalue=6e-40, Organism=Drosophila melanogaster, GI17737899, Length=197, Percent_Identity=36.0406091370558, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24645822, Length=197, Percent_Identity=36.0406091370558, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24663208, Length=205, Percent_Identity=27.8048780487805, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI17647141, Length=205, Percent_Identity=27.8048780487805, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI221459597, Length=194, Percent_Identity=27.319587628866, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI21356893, Length=194, Percent_Identity=27.319587628866, Blast_Score=88, Evalue=6e-18,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 31052; Mature: 31052
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILLGPPGSGKGTQAQRLVQQYGIVQLSTGDMLRAAVAAQTPIGLKAKDIMAAGGLVP CEEEEECCCCCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHCCCCH DEVVVGIIADRIEQPDAANGFILDGFPRTVPQAEALDALLKQKQMNLDAVIELRVNEGVL HHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHH LERVERRAAETRARGEAVRADDTPEVLTKRLHSYRDQTEPLIHYYSDHRMLATVDGMMPI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHCCCCCH EEVTEEIGRILAAVGKSAGSRAAKKASPAKRSAKTAAPPKAAKKAAKRASKTAAPAKKAA HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH KKAAKPAKTAKKAAKTVKKTVKKAAKKSSKAAAKATKGTRKTSSKSAKKRSKG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRLILLGPPGSGKGTQAQRLVQQYGIVQLSTGDMLRAAVAAQTPIGLKAKDIMAAGGLVP CEEEEECCCCCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHCCCCH DEVVVGIIADRIEQPDAANGFILDGFPRTVPQAEALDALLKQKQMNLDAVIELRVNEGVL HHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHH LERVERRAAETRARGEAVRADDTPEVLTKRLHSYRDQTEPLIHYYSDHRMLATVDGMMPI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHCCCCCH EEVTEEIGRILAAVGKSAGSRAAKKASPAKRSAKTAAPPKAAKKAAKRASKTAAPAKKAA HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH KKAAKPAKTAKKAAKTVKKTVKKAAKKSSKAAAKATKGTRKTSSKSAKKRSKG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA