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The map label for this gene is secY [H]

Identifier: 146340077

GI number: 146340077

Start: 3282706

End: 3284037

Strand: Direct

Name: secY [H]

Synonym: BRADO3086

Alternate gene names: 146340077

Gene position: 3282706-3284037 (Clockwise)

Preceding gene: 146340076

Following gene: 146340078

Centisome position: 44.02

GC content: 62.31

Gene sequence:

>1332_bases
ATGGCCTCAGCAGCGGAACAACTGGCGGCAAACCTCAATTTCGGCGCGCTTGCAAAAGCCGATGAGCTGAAGAAGCGCAT
CTGGTTCACCCTCGGCGCGCTGCTGGTCTACCGCCTCGGCACCTATATTCCGCTGCCCGGCATCGACCCGAATATCTGGG
ATTCAGTGTTCCGCACCCAGGCCGGCGGCATTCTCGGCATGTTCAACATGTTCGCCGGCGGCGGCATCCACCGCATGGCG
ATCTTCGCGCTGAACATCATGCCGTACATCTCGGCATCGATCATCATCCAGCTCCTGACCACGGTGTCGCCGCAGCTCGA
AGCCCTCAAGAAAGAGGGGGAGGCGGGCCGCAAGATGCTGAACCAGTACACCCGCTATCTGACGGTGATCCTGGCCGCCG
TGCAGTCCTACGGCATTGCCGTGGGGCTCGAGGGCGCCGGTAACGTCGTCGCCGATCCCGGCCTGTTCTTCCGCCTGTCG
ACCGCGATCACCCTGACCGGCGGAACCATGTTCCTGATGTGGCTCGGCGAGCAGATCACCTCGCGCGGCATCGGCAACGG
CATCTCGCTGATCATCCTGTCCGGCATCGTCGCCGAGCTGCCGTCGGCGCTGGCCAACATGCTCGAGCTGGGCCGCCAGG
GTGCGCTGTCCACTGGCCTGATCCTGATCGTCATCGTGATGGCGGTCGCCGTGATCGCCTTCATCGTGTTCATGGAGCGC
GCCCAGCGCCGGCTGCTGATCCAGTATCCGAAGCGCCAGGTCGGCAACAAGATGTTCGAGGGCCAGTCCTCGCATCTGCC
GCTGAAGCTGAACACCTCGGGCGTCATCCCGCCGATCTTCGCCTCGTCGCTGCTGCTGCTGCCGACCACTGTTGCCAATT
TCAACGCCGGCAAGGGGCCGGAGTGGTTCCAGTGGATCACCACCCAGCTCGGTCACGGCCGGCCGCTGTTCCTGGTGCTG
TATCTGGCGCTGATCCTGTTCTTCGCCTTCTTCTATACCGCGATCGTGTTCAACCCGACCGAGACCGCCGACAACCTCAA
GAAGCATGGCGGCTTCATCCCGGGCATTCGCCCCGGCGAGCGTACCGCGGAATATATCGACTACGTCCTGTCCCGAATCA
CGGTGCTCGGCGCCATCTATCTGGCGATCGTGTGTCTGATCCCGGAAATTCTGATTTCCTACGCTTCCGTCCCGTTCTAC
TTTGGTGGCACTTCGCTTCTGATCGTTGTCAGCGTTACGATGGATACCGTGGCGCAGGTTCAGGGTTATCTGCTCGCCCA
TCAGTATGAGGGGCTGATCAGGAAGTCGAAGCTGCGGGGTCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
TCGCGCTCGCGTACCAGATAATATCCGACGTCCGCCCCAAGCCCCGCGAGCCCTCGCGGGGCTGATCTGGTCAAGAAGGG
CGGCGGGAGAAAGCTAAGAC

Downstream 100 bases:

>100_bases
CAGCGGCGGATCGCGGCCCGGGAACCAAAAAGCCAAGAACAAGGTGTGCGGGAGGATCGCTCACCGTGTGCCGGGGGGCG
AAATTTAGATGAGACTCATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MASAAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQAGGILGMFNMFAGGGIHRMA
IFALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKMLNQYTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLS
TAITLTGGTMFLMWLGEQITSRGIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMER
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEWFQWITTQLGHGRPLFLVL
YLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY
FGGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIRKSKLRGRRR

Sequences:

>Translated_443_residues
MASAAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQAGGILGMFNMFAGGGIHRMA
IFALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKMLNQYTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLS
TAITLTGGTMFLMWLGEQITSRGIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMER
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEWFQWITTQLGHGRPLFLVL
YLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFY
FGGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIRKSKLRGRRR
>Mature_442_residues
ASAAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQAGGILGMFNMFAGGGIHRMAI
FALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKMLNQYTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLST
AITLTGGTMFLMWLGEQITSRGIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMERA
QRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGPEWFQWITTQLGHGRPLFLVLY
LALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGERTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFYF
GGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIRKSKLRGRRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=426, Percent_Identity=55.6338028169014, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48296; Mature: 48165

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQ
CCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKML
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCEEEEEEEEEECCCHHHHHHHHHHHH
SRGIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMER
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
EWFQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH
RTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHEEHHHHHHHHHH
QGYLLAHQYEGLIRKSKLRGRRR
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASAAEQLAANLNFGALAKADELKKRIWFTLGALLVYRLGTYIPLPGIDPNIWDSVFRTQ
CCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLLTTVSPQLEALKKEGEAGRKML
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVILAAVQSYGIAVGLEGAGNVVADPGLFFRLSTAITLTGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCEEEEEEEEEECCCHHHHHHHHHHHH
SRGIGNGISLIILSGIVAELPSALANMLELGRQGALSTGLILIVIVMAVAVIAFIVFMER
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNKMFEGQSSHLPLKLNTSGVIPPIFASSLLLLPTTVANFNAGKGP
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
EWFQWITTQLGHGRPLFLVLYLALILFFAFFYTAIVFNPTETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH
RTAEYIDYVLSRITVLGAIYLAIVCLIPEILISYASVPFYFGGTSLLIVVSVTMDTVAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHEEHHHHHHHHHH
QGYLLAHQYEGLIRKSKLRGRRR
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA