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The map label for this gene is frc [H]

Identifier: 146340025

GI number: 146340025

Start: 3232048

End: 3233274

Strand: Direct

Name: frc [H]

Synonym: BRADO3032

Alternate gene names: 146340025

Gene position: 3232048-3233274 (Clockwise)

Preceding gene: 146340024

Following gene: 146340028

Centisome position: 43.34

GC content: 65.36

Gene sequence:

>1227_bases
ATGTCGGCCCTGCCGCTGTCTGGCATCAAGATTCTCGACCTCACGCGCGTATTGGCCGGTCCGCTCTCGGCTCAGATGCT
GGCCGATCTCGGCGCCGAGGTGATCAAGATCGAGCGCCCGGGCACCGGCGACGACGCGCGCGCCTTCGGCCCGCCTTACC
TCAAGGATCCCGAAGGCAAGGCCAACAACAACAACTCGTTCTATCTCTGCGCAAACCGCAACAAGAAGTCGGTGACCGTC
AACATCGCCTCGCCTGAAGGGCAGGAGATCATCCGCGCGCTCGCCAAGGACTGCGACGTGTTCATGGAGAACTACAAGGT
CGGCGATCTCAAGCGCTATGGCCTCGACTACGAGGCCATCAGGGCGATCAATCCCGACGTGATCTACTGCTCCGTGACCG
GCTTCGGCCAGACCGGCCCTTATTCGCCGCGCGCCGGCTATGACGCGATCTTCCAGGCGATGGGCGGCCTCATGAGCGTC
ACCGGCCACATGGACGGCGAGCCGGGGGCGGGGCCGATGAAGGTCGGCCCCTCGATCGTCGACTACATGACCGGAATGAA
CACCTCGATCGGCATTCTCTCGGCGCTGTACCATCGCGACGTCAATGGCGGCGGCGGCCAGCACATCGACGTCTGCCTGT
TCGACACCGTGATCGCCTCGCTGTCGCATTACGCGCAGATCTTCCTGGTCAACGGCAAGTCGCCGCCGCGCCGCGGCACC
TGGGGCAATGGCGGCATGCCGGCCGGCGTGTTCCGCTGCACCGACGGCGAGCTGATGCTGGTGGTCGGCAACGACGCGCA
GTTCGCGCGCACCTGCGCGGTGCTGGGGGCGCCGGAGCTCGCGACCGATCCCAAATTCGTCAAGAACAACGACCGCGTCG
TCAACGGCAAGGAGATCATGGCGATCTTCGCCGGCCTGTTCCTGAAGAACTCGGTCGCGCATTGGCTGGACGAGCTGGAG
AAGGCCGGTGTGCCTTGCGGCCCCGTCAACGATTTCGCCCACGTCTTCGCCGACCCGCATGTCCGCTCGCGCGGCATGGA
GGTGAAGGTCGATCACCCGTTCGAGCCGCAGCTGTCGCTGATCCGCAACGCGCTGACGTTTTCGGGCACGCCGATCACCG
AGTACCGCGCGCCGCCGCTGCTCGGCCAGCATACAAGGGACGTGCTGGCGGGGATCGGGTATGACGACGACAAGATCGCG
GCGCTGAAGCAGCAGGGCGTGGTGTAG

Upstream 100 bases:

>100_bases
GAGAGCGCAGTGCTCGACGCGGCGAAATGGTGTATCCGCGGGGGACAGGCGGCGGCTCCAGGGCTGTCCGCCACAAGGAA
TAAGCTCCCGGAGGAACTCC

Downstream 100 bases:

>100_bases
GGCGCGACAATCGCGGCATTCTCCGGTGTCGTCCCGGCGAACGCCGGGACCCATAACCACCGGCCGCGGTGCTGATCCTC
GATCTCTCCCCGCGTGCCTC

Product: putative L-carnitine dehydrogenase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSALPLSGIKILDLTRVLAGPLSAQMLADLGAEVIKIERPGTGDDARAFGPPYLKDPEGKANNNNSFYLCANRNKKSVTV
NIASPEGQEIIRALAKDCDVFMENYKVGDLKRYGLDYEAIRAINPDVIYCSVTGFGQTGPYSPRAGYDAIFQAMGGLMSV
TGHMDGEPGAGPMKVGPSIVDYMTGMNTSIGILSALYHRDVNGGGGQHIDVCLFDTVIASLSHYAQIFLVNGKSPPRRGT
WGNGGMPAGVFRCTDGELMLVVGNDAQFARTCAVLGAPELATDPKFVKNNDRVVNGKEIMAIFAGLFLKNSVAHWLDELE
KAGVPCGPVNDFAHVFADPHVRSRGMEVKVDHPFEPQLSLIRNALTFSGTPITEYRAPPLLGQHTRDVLAGIGYDDDKIA
ALKQQGVV

Sequences:

>Translated_408_residues
MSALPLSGIKILDLTRVLAGPLSAQMLADLGAEVIKIERPGTGDDARAFGPPYLKDPEGKANNNNSFYLCANRNKKSVTV
NIASPEGQEIIRALAKDCDVFMENYKVGDLKRYGLDYEAIRAINPDVIYCSVTGFGQTGPYSPRAGYDAIFQAMGGLMSV
TGHMDGEPGAGPMKVGPSIVDYMTGMNTSIGILSALYHRDVNGGGGQHIDVCLFDTVIASLSHYAQIFLVNGKSPPRRGT
WGNGGMPAGVFRCTDGELMLVVGNDAQFARTCAVLGAPELATDPKFVKNNDRVVNGKEIMAIFAGLFLKNSVAHWLDELE
KAGVPCGPVNDFAHVFADPHVRSRGMEVKVDHPFEPQLSLIRNALTFSGTPITEYRAPPLLGQHTRDVLAGIGYDDDKIA
ALKQQGVV
>Mature_407_residues
SALPLSGIKILDLTRVLAGPLSAQMLADLGAEVIKIERPGTGDDARAFGPPYLKDPEGKANNNNSFYLCANRNKKSVTVN
IASPEGQEIIRALAKDCDVFMENYKVGDLKRYGLDYEAIRAINPDVIYCSVTGFGQTGPYSPRAGYDAIFQAMGGLMSVT
GHMDGEPGAGPMKVGPSIVDYMTGMNTSIGILSALYHRDVNGGGGQHIDVCLFDTVIASLSHYAQIFLVNGKSPPRRGTW
GNGGMPAGVFRCTDGELMLVVGNDAQFARTCAVLGAPELATDPKFVKNNDRVVNGKEIMAIFAGLFLKNSVAHWLDELEK
AGVPCGPVNDFAHVFADPHVRSRGMEVKVDHPFEPQLSLIRNALTFSGTPITEYRAPPLLGQHTRDVLAGIGYDDDKIAA
LKQQGVV

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=405, Percent_Identity=43.7037037037037, Blast_Score=330, Evalue=2e-90,
Organism=Homo sapiens, GI300863124, Length=431, Percent_Identity=41.0672853828306, Blast_Score=315, Evalue=3e-86,
Organism=Homo sapiens, GI300863126, Length=405, Percent_Identity=40.7407407407407, Blast_Score=292, Evalue=5e-79,
Organism=Homo sapiens, GI13376042, Length=431, Percent_Identity=36.6589327146172, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI42794625, Length=407, Percent_Identity=25.7985257985258, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI266456254, Length=407, Percent_Identity=25.7985257985258, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI266458393, Length=267, Percent_Identity=28.8389513108614, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI266458397, Length=267, Percent_Identity=28.8389513108614, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI266458395, Length=153, Percent_Identity=30.0653594771242, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI42822893, Length=153, Percent_Identity=30.0653594771242, Blast_Score=90, Evalue=5e-18,
Organism=Escherichia coli, GI87082093, Length=346, Percent_Identity=35.2601156069364, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1788717, Length=433, Percent_Identity=33.256351039261, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1786222, Length=416, Percent_Identity=23.5576923076923, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=340, Percent_Identity=25, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI115535051, Length=338, Percent_Identity=25.4437869822485, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24648431, Length=405, Percent_Identity=41.2345679012346, Blast_Score=307, Evalue=9e-84,
Organism=Drosophila melanogaster, GI24585488, Length=354, Percent_Identity=24.8587570621469, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43758; Mature: 43626

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALPLSGIKILDLTRVLAGPLSAQMLADLGAEVIKIERPGTGDDARAFGPPYLKDPEGK
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
ANNNNSFYLCANRNKKSVTVNIASPEGQEIIRALAKDCDVFMENYKVGDLKRYGLDYEAI
CCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHH
RAINPDVIYCSVTGFGQTGPYSPRAGYDAIFQAMGGLMSVTGHMDGEPGAGPMKVGPSIV
HHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHH
DYMTGMNTSIGILSALYHRDVNGGGGQHIDVCLFDTVIASLSHYAQIFLVNGKSPPRRGT
HHHHCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCEEEEEEECCCCCCCCC
WGNGGMPAGVFRCTDGELMLVVGNDAQFARTCAVLGAPELATDPKFVKNNDRVVNGKEIM
CCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCCEEECHHHHH
AIFAGLFLKNSVAHWLDELEKAGVPCGPVNDFAHVFADPHVRSRGMEVKVDHPFEPQLSL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCEEEECCCCCHHHHH
IRNALTFSGTPITEYRAPPLLGQHTRDVLAGIGYDDDKIAALKQQGVV
HHHHHHCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SALPLSGIKILDLTRVLAGPLSAQMLADLGAEVIKIERPGTGDDARAFGPPYLKDPEGK
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
ANNNNSFYLCANRNKKSVTVNIASPEGQEIIRALAKDCDVFMENYKVGDLKRYGLDYEAI
CCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHH
RAINPDVIYCSVTGFGQTGPYSPRAGYDAIFQAMGGLMSVTGHMDGEPGAGPMKVGPSIV
HHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHH
DYMTGMNTSIGILSALYHRDVNGGGGQHIDVCLFDTVIASLSHYAQIFLVNGKSPPRRGT
HHHHCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCEEEEEEECCCCCCCCC
WGNGGMPAGVFRCTDGELMLVVGNDAQFARTCAVLGAPELATDPKFVKNNDRVVNGKEIM
CCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCCEEECHHHHH
AIFAGLFLKNSVAHWLDELEKAGVPCGPVNDFAHVFADPHVRSRGMEVKVDHPFEPQLSL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCEEEECCCCCHHHHH
IRNALTFSGTPITEYRAPPLLGQHTRDVLAGIGYDDDKIAALKQQGVV
HHHHHHCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA