| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yjgR [H]
Identifier: 146339692
GI number: 146339692
Start: 2887506
End: 2889110
Strand: Direct
Name: yjgR [H]
Synonym: BRADO2688
Alternate gene names: 146339692
Gene position: 2887506-2889110 (Clockwise)
Preceding gene: 146339680
Following gene: 146339693
Centisome position: 38.72
GC content: 65.55
Gene sequence:
>1605_bases ATGGCACCATCCGGAAAATCCTTGGCTGATACCGACGACAAGATTCTCGTAGGTGCCGGTGAGCAGCCGGCGTGGTTGAC GCTGGCGCTTGCCAATCGCCATGGGCTCGTGACGGGCGCGACCGGTACCGGCAAGACCGTATCGCTGCAGGTGATGGCCG AAGGTTTTGCGCGCGCCGGTGTTCCGGTCTTCGCCTCCGACATCAAGGGTGATCTCTCGGGCATCTCGCAGATCGGCGAA GCGAAGGATTTCATCGTCAAGCGCGCGAGCGAGCTCGGCCTCACCTATCAGCCCGATCAGTTCTCGACGGTATTTTGGGA TGTGTTCGGCGAGCAGGGCCATCCGGTACGCGCGACCGTCACCGAGATGGGACCGCTGCTGCTGGCAAGGATGCTCGATC TCAACGACGTTCAAGAGGGTGTGCTCAACGTCGCGTTCCGCGTCGCCGACGAGAACGGTCTCGCGCTGATCGACATGAAG GATCTGCGCGCGCTGCTCGATGCGATCATTCCGGACACCAAGAAGGGTGCCGATGCCGAGGCGGATCCGCTCGCGCCGAT CCGCAAGGCCGCACAGTCGTTCGGCAACGTCACGCGCGCGACCGTCGGCACGATTCAGCGTCAGCTGCTGGTGCTCGAGA ACCAGGGTGGTACGAAGTTCTTCGGCGAGCCCGCGCTGTCGCTGCAGGACTTCATGAAGACCGACCGCGACGGCCGCGGC ATGATCAACATCCTCGTCGCCGACAAGCTGCTGCAGAACCCGCGGCTCTACGCGACGTTCCTGCTGTGGATGCTGTCGGA GCTGTTCGAGGAGCTCCCGGAGGTCGGCGACGTCGCCAAGCCCAAGCTCGTCTTCTTCTTCGACGAGGCGCATCTGTTGT TCAACGATGCGCCGAAGGCGCTGATGGACAAGATCGAGCAGGTCGTTCGCCTGATCCGCTCCAAGGGCGTCGGCGTGTAT TTCGTCACGCAGAACCCGCTCGACGTTCCCGATCGCGTGCTCGGGCAGCTGGGCAACCGCGTGCAGCACGCGCTGCGCGC CTTCACGCCGCGCGATCAGAAGGCGGTGGCGGCGGCCGCCGATACGTTCCGTCCCAATCCCAAGCTCGATACGGCCAAGG TGATCACGGAACTCGGCAAGGGCGAGGCCTTGGTGTCGTTCCTGGAAGGCAACGGTACGCCGGCGATGGTCGAGCGCGTG CTGATCCGGCCGCCATCCGCACGGATCGGGCCGGTCACGCCTGAGGAGCGCAAGGCGATCATCGCCGCCAGCCCGGTCAA GGGCAAGTACGACACCGAGATCGATGCGGAGTCCGCCTACGAGATCCTGCAGAAGCGGATCGCCGGGACGGCGACGGCTG AGCCAGGCTCCGGCAGCGTGCTGGGCAAGATCGGCGACATCGCAGCGACGATCTTCGGCACCAACGTCAAGCGCGGCCAA CTGTCGACCACGCAGGTGATCGCGCGCAACGTCGCTCGCCAGGTCACCGACAAGGTCGTCGGCGGCATCGCGGCCGATCT CGGCAAGCAGGTCGGCGGCTCGCTCGGCGGCTCGATCGGCCGCAGCCTCGTGCGCGGCGCGCTCGGCGGATTGCTGCGGC GCTGA
Upstream 100 bases:
>100_bases ACGCTGGTTCCGATGTGCGAAACTAAAGTATGTTACCGGTGTCGAACGCGCTCCGCGCCACGTGCGATGCGAAACAAACA TTCTCGAAAGACGGATCAAC
Downstream 100 bases:
>100_bases GCCATGCCGTCTTCGCCAGCGTGATGCTCGCGGCATCACGCTGGTCCGGACCGCGCAACGGGGCTACAAGCAAGCCAACG CTCGTCACTTGCGAAGGGAT
Product: putative ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MAPSGKSLADTDDKILVGAGEQPAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAGVPVFASDIKGDLSGISQIGE AKDFIVKRASELGLTYQPDQFSTVFWDVFGEQGHPVRATVTEMGPLLLARMLDLNDVQEGVLNVAFRVADENGLALIDMK DLRALLDAIIPDTKKGADAEADPLAPIRKAAQSFGNVTRATVGTIQRQLLVLENQGGTKFFGEPALSLQDFMKTDRDGRG MINILVADKLLQNPRLYATFLLWMLSELFEELPEVGDVAKPKLVFFFDEAHLLFNDAPKALMDKIEQVVRLIRSKGVGVY FVTQNPLDVPDRVLGQLGNRVQHALRAFTPRDQKAVAAAADTFRPNPKLDTAKVITELGKGEALVSFLEGNGTPAMVERV LIRPPSARIGPVTPEERKAIIAASPVKGKYDTEIDAESAYEILQKRIAGTATAEPGSGSVLGKIGDIAATIFGTNVKRGQ LSTTQVIARNVARQVTDKVVGGIAADLGKQVGGSLGGSIGRSLVRGALGGLLRR
Sequences:
>Translated_534_residues MAPSGKSLADTDDKILVGAGEQPAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAGVPVFASDIKGDLSGISQIGE AKDFIVKRASELGLTYQPDQFSTVFWDVFGEQGHPVRATVTEMGPLLLARMLDLNDVQEGVLNVAFRVADENGLALIDMK DLRALLDAIIPDTKKGADAEADPLAPIRKAAQSFGNVTRATVGTIQRQLLVLENQGGTKFFGEPALSLQDFMKTDRDGRG MINILVADKLLQNPRLYATFLLWMLSELFEELPEVGDVAKPKLVFFFDEAHLLFNDAPKALMDKIEQVVRLIRSKGVGVY FVTQNPLDVPDRVLGQLGNRVQHALRAFTPRDQKAVAAAADTFRPNPKLDTAKVITELGKGEALVSFLEGNGTPAMVERV LIRPPSARIGPVTPEERKAIIAASPVKGKYDTEIDAESAYEILQKRIAGTATAEPGSGSVLGKIGDIAATIFGTNVKRGQ LSTTQVIARNVARQVTDKVVGGIAADLGKQVGGSLGGSIGRSLVRGALGGLLRR >Mature_533_residues APSGKSLADTDDKILVGAGEQPAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAGVPVFASDIKGDLSGISQIGEA KDFIVKRASELGLTYQPDQFSTVFWDVFGEQGHPVRATVTEMGPLLLARMLDLNDVQEGVLNVAFRVADENGLALIDMKD LRALLDAIIPDTKKGADAEADPLAPIRKAAQSFGNVTRATVGTIQRQLLVLENQGGTKFFGEPALSLQDFMKTDRDGRGM INILVADKLLQNPRLYATFLLWMLSELFEELPEVGDVAKPKLVFFFDEAHLLFNDAPKALMDKIEQVVRLIRSKGVGVYF VTQNPLDVPDRVLGQLGNRVQHALRAFTPRDQKAVAAAADTFRPNPKLDTAKVITELGKGEALVSFLEGNGTPAMVERVL IRPPSARIGPVTPEERKAIIAASPVKGKYDTEIDAESAYEILQKRIAGTATAEPGSGSVLGKIGDIAATIFGTNVKRGQL STTQVIARNVARQVTDKVVGGIAADLGKQVGGSLGGSIGRSLVRGALGGLLRR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=499, Percent_Identity=55.310621242485, Blast_Score=525, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 56991; Mature: 56860
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSGKSLADTDDKILVGAGEQPAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAG CCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEHHHHHHHCC VPVFASDIKGDLSGISQIGEAKDFIVKRASELGLTYQPDQFSTVFWDVFGEQGHPVRATV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCEEEEH TEMGPLLLARMLDLNDVQEGVLNVAFRVADENGLALIDMKDLRALLDAIIPDTKKGADAE HHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCC ADPLAPIRKAAQSFGNVTRATVGTIQRQLLVLENQGGTKFFGEPALSLQDFMKTDRDGRG CCCCHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCEECCCCCHHHHHHHHCCCCCCC MINILVADKLLQNPRLYATFLLWMLSELFEELPEVGDVAKPKLVFFFDEAHLLFNDAPKA EEEHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHEECCCCHH LMDKIEQVVRLIRSKGVGVYFVTQNPLDVPDRVLGQLGNRVQHALRAFTPRDQKAVAAAA HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DTFRPNPKLDTAKVITELGKGEALVSFLEGNGTPAMVERVLIRPPSARIGPVTPEERKAI HHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHCCEE IAASPVKGKYDTEIDAESAYEILQKRIAGTATAEPGSGSVLGKIGDIAATIFGTNVKRGQ EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC LSTTQVIARNVARQVTDKVVGGIAADLGKQVGGSLGGSIGRSLVRGALGGLLRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure APSGKSLADTDDKILVGAGEQPAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAG CCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEHHHHHHHCC VPVFASDIKGDLSGISQIGEAKDFIVKRASELGLTYQPDQFSTVFWDVFGEQGHPVRATV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCEEEEH TEMGPLLLARMLDLNDVQEGVLNVAFRVADENGLALIDMKDLRALLDAIIPDTKKGADAE HHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCC ADPLAPIRKAAQSFGNVTRATVGTIQRQLLVLENQGGTKFFGEPALSLQDFMKTDRDGRG CCCCHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCEECCCCCHHHHHHHHCCCCCCC MINILVADKLLQNPRLYATFLLWMLSELFEELPEVGDVAKPKLVFFFDEAHLLFNDAPKA EEEHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHEECCCCHH LMDKIEQVVRLIRSKGVGVYFVTQNPLDVPDRVLGQLGNRVQHALRAFTPRDQKAVAAAA HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DTFRPNPKLDTAKVITELGKGEALVSFLEGNGTPAMVERVLIRPPSARIGPVTPEERKAI HHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHCCEE IAASPVKGKYDTEIDAESAYEILQKRIAGTATAEPGSGSVLGKIGDIAATIFGTNVKRGQ EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC LSTTQVIARNVARQVTDKVVGGIAADLGKQVGGSLGGSIGRSLVRGALGGLLRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]