| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146339631
Identifier: 146339631
GI number: 146339631
Start: 2814737
End: 2817094
Strand: Direct
Name: 146339631
Synonym: BRADO2624
Alternate gene names: NA
Gene position: 2814737-2817094 (Clockwise)
Preceding gene: 146339630
Following gene: 146339633
Centisome position: 37.75
GC content: 65.01
Gene sequence:
>2358_bases ATGCTGGATGTCAGGCACGACAACGAAGTCCATGTCGAGAAAGTCGAGCAGCGACCGGCCGACAGCATTGCCTTCGGGCT GGAGCGCCTCGGGCTGCTCGCCGTCAAGGTGCCGGTGCTGTCCTGCATCGTCCTGCTGCTTCTGATTGTCGCGGCCGTGT TCGGCATCAAGCGCATCCAGATCGACGATTCGCTGAGCCAGCTGTTCCGCTCCGACAGCAAGGAATTTCATCAGTACGAG GAGGTCACCAAGAAGTTCCCGGCCGAGGAATTCGACGTTCTCGTCGTCGTCGAGGGCAAGACGCTGCTTGCCCGCCAGAA CCTGGAGAAGCTGCGCGACTTCGTCACCGATCTGCAACTGGTCGAGGGCACGCGCGGCCTGGTGTCGCTGTTCTCGGCCC GCCAGGCGCCGGCGCCCGGCAAGCTGCCGGCGGCGCTGTTTCCCTCCGACCTTCCGGAGGGCGAGGCCTATGACAAGTTC ATCGACACTGTGAAGTCCAACGAGATCATCCGCGGCAAGCTGCTGTCGGAGGACGGCACGCTGGCGCTGGTCGTGCTGTC GCTCGAGCCGAAGGTGGTCGCCTCCAACGATCTGGGCAAGGTCGTCGGCGATATCCGCAAGCTGATGACGGACGACCTCG CCGATACCGGCCTGAACGTGCAGCTGTCCGGCGTCCCGGTGATGCAGCTTGAGATCCGCAACGCGGTCGAGCGCGACGGC CTGACCTACAATGTGCTCGGCATTCTCGCCGGCTGCATCATCGCCATCATCTTCTTCCGCAAGATCTCCTTCATGATCGT GGCGGCGTTCCCGCCGCTGATCGCCATCATGCTCGCGCTCGGCGCGCTCGGCTGGGCGAATTTCAACCTCAACATGTTCC TGAATGTGATGACGCCGCTCATCATGGTCATCAGCTTCTCCGACTCGATGCAGCTGACCTTCGCCGCGCGCGATCGCCTG ATCGCGGGCCAGGACAAGGTGACGGCGTTCAAGAATGCGGTGCTGGTTGTCGGTCCCGCCTGCGTGCTGACGCACGCCAC CGCCGGCATTTCCTTCATTGCCCTGCAATTCTCCGACAGCGACCTGATCCGCAAGTTCGGCGAGGCGGGGCTCGCCGCCA CCGTCATCGCGCTGCTCGCGGTGTTGTCGCTCGTGCCGGTGTTCGGCGTGCTGCTGGTGCGCAACGAGAAGACGTTCGCG GTCAAGTTCCAGGGCGCCGATGCCGGCGTGCAGGCGCTGCGCAATTTCTGCTACTGGATCGCGGTGCGGATGGTCGGCCG CCCCGGCCTTTTCAGCCTGATCGCGGTCGTGTTCGTCGGCTCGCTGGCGGTGGTCTATGCGAGCCTGGAGCCGCGCTACC GCCTGGCCGACCAGGTGCCCGACAAGCGCCAGGCGGTCGCTGCGAGCAACCGTCTCGACGCCAAGCTGACCGGCGCCAAC CCGGTCAACGTGCTCATCCAGTTTCCGAAGGGCGCATCGCTGTATGCGCCGGAGACGCTGCAGACGATCGCCGACGTCCA CGCCACGGTCGAGAAGACCGCGGGCGTCGGCAACGTCTGGTCGGTCGAGACGCTCAGGCGGTGGCTGGCCGAGAAGGCGC AATCGTCGGATACCGCGACCTTGCAGGAATACGTCAACCTGATCCCCGAGCATCTGGTACGCCGCTTTATCGACAAGGAG CAGGACGCCGTGGTCGTCGCCGGCCGCGTGCCCGACCTCGACTCCAGCCAGCTGCTGCCGGTGGTCGACAAGCTCGACCA CGAGCTTGACGCCGTCAGGAAGAAGCATCCCGGCTACGAGGTTGCCGTGACCGGCCTCGCGGCCATCGCCGCGCGCAATT CCGCCAGCATGATCGAAAAGCTCAATCACGGGCTGACGATCGAGTTCGCGCTGGTGGCGATGTTCATCGGGTTGGCTTTC CGCTCCTGGGTGGTGATGCTGGCCTGCATCCTGCCCGGCATCTTCCCGGTCGTGATGTCCGGCACCGTGCTGTGGGCGAT GGGGGAGGGGCTGCAATTCGCCAGCGTCGTCGCGCTGACGGTCTCGTTCGGGCTGGGCCTGTCCGCCACTATCCACTTCC TCAACCGCTTGCGCATGGAGAGTGCACCCGGCGTGAGTGCTGCCATTGCGGTCGAACGCGCCACCGTGCTGGTCGGCCCG GCGCTGATCCTCACCACGGTGGTGCTGGCCTGCGGCCTCGTCGTCACCGTGTTCTCCGACCTGCCGTCGCTGCGGCTGTT CGGCTGGCTCAGCGCCTTCTCGATGGTGGCTGCGCTGTTCGCCGACCTCTTCATCCTGCGGCCGACCGCGATGTTCCTGA TCAACCTGTCGCAGAAGTTGAAGCGCAAGCAGGTATGA
Upstream 100 bases:
>100_bases CCACAATGCGGTCATGTCAGCTTCGCTGAGTGGCCTTATTTCTGCCCTATGCGCTCAGGCCTCCCCGAATGGGGCCGCGC CGTAACCACTGGACCCCCCT
Downstream 100 bases:
>100_bases GCGCACGCGGTCGAAGCCAAAGCGCGCGCCACCGTCATCTTCTGCGAAGGCGCGAGGTATCCATGCCACACGAAGCTGTC ATCGCCCGGCTTGACCGGGC
Product: putative membrane transporter
Products: NA
Alternate protein names: RND Efflux Transporter; Membrane Transporter; Patched Family Protein; Exporter Of RND Superfamily Protein-Like Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Exporter Of RND Superfamily; RND Superfamily Exporter; Exporter Of RND Superfamily Protein; Integral Membrane Protein; Histidine Kinase
Number of amino acids: Translated: 785; Mature: 785
Protein sequence:
>785_residues MLDVRHDNEVHVEKVEQRPADSIAFGLERLGLLAVKVPVLSCIVLLLLIVAAVFGIKRIQIDDSLSQLFRSDSKEFHQYE EVTKKFPAEEFDVLVVVEGKTLLARQNLEKLRDFVTDLQLVEGTRGLVSLFSARQAPAPGKLPAALFPSDLPEGEAYDKF IDTVKSNEIIRGKLLSEDGTLALVVLSLEPKVVASNDLGKVVGDIRKLMTDDLADTGLNVQLSGVPVMQLEIRNAVERDG LTYNVLGILAGCIIAIIFFRKISFMIVAAFPPLIAIMLALGALGWANFNLNMFLNVMTPLIMVISFSDSMQLTFAARDRL IAGQDKVTAFKNAVLVVGPACVLTHATAGISFIALQFSDSDLIRKFGEAGLAATVIALLAVLSLVPVFGVLLVRNEKTFA VKFQGADAGVQALRNFCYWIAVRMVGRPGLFSLIAVVFVGSLAVVYASLEPRYRLADQVPDKRQAVAASNRLDAKLTGAN PVNVLIQFPKGASLYAPETLQTIADVHATVEKTAGVGNVWSVETLRRWLAEKAQSSDTATLQEYVNLIPEHLVRRFIDKE QDAVVVAGRVPDLDSSQLLPVVDKLDHELDAVRKKHPGYEVAVTGLAAIAARNSASMIEKLNHGLTIEFALVAMFIGLAF RSWVVMLACILPGIFPVVMSGTVLWAMGEGLQFASVVALTVSFGLGLSATIHFLNRLRMESAPGVSAAIAVERATVLVGP ALILTTVVLACGLVVTVFSDLPSLRLFGWLSAFSMVAALFADLFILRPTAMFLINLSQKLKRKQV
Sequences:
>Translated_785_residues MLDVRHDNEVHVEKVEQRPADSIAFGLERLGLLAVKVPVLSCIVLLLLIVAAVFGIKRIQIDDSLSQLFRSDSKEFHQYE EVTKKFPAEEFDVLVVVEGKTLLARQNLEKLRDFVTDLQLVEGTRGLVSLFSARQAPAPGKLPAALFPSDLPEGEAYDKF IDTVKSNEIIRGKLLSEDGTLALVVLSLEPKVVASNDLGKVVGDIRKLMTDDLADTGLNVQLSGVPVMQLEIRNAVERDG LTYNVLGILAGCIIAIIFFRKISFMIVAAFPPLIAIMLALGALGWANFNLNMFLNVMTPLIMVISFSDSMQLTFAARDRL IAGQDKVTAFKNAVLVVGPACVLTHATAGISFIALQFSDSDLIRKFGEAGLAATVIALLAVLSLVPVFGVLLVRNEKTFA VKFQGADAGVQALRNFCYWIAVRMVGRPGLFSLIAVVFVGSLAVVYASLEPRYRLADQVPDKRQAVAASNRLDAKLTGAN PVNVLIQFPKGASLYAPETLQTIADVHATVEKTAGVGNVWSVETLRRWLAEKAQSSDTATLQEYVNLIPEHLVRRFIDKE QDAVVVAGRVPDLDSSQLLPVVDKLDHELDAVRKKHPGYEVAVTGLAAIAARNSASMIEKLNHGLTIEFALVAMFIGLAF RSWVVMLACILPGIFPVVMSGTVLWAMGEGLQFASVVALTVSFGLGLSATIHFLNRLRMESAPGVSAAIAVERATVLVGP ALILTTVVLACGLVVTVFSDLPSLRLFGWLSAFSMVAALFADLFILRPTAMFLINLSQKLKRKQV >Mature_785_residues MLDVRHDNEVHVEKVEQRPADSIAFGLERLGLLAVKVPVLSCIVLLLLIVAAVFGIKRIQIDDSLSQLFRSDSKEFHQYE EVTKKFPAEEFDVLVVVEGKTLLARQNLEKLRDFVTDLQLVEGTRGLVSLFSARQAPAPGKLPAALFPSDLPEGEAYDKF IDTVKSNEIIRGKLLSEDGTLALVVLSLEPKVVASNDLGKVVGDIRKLMTDDLADTGLNVQLSGVPVMQLEIRNAVERDG LTYNVLGILAGCIIAIIFFRKISFMIVAAFPPLIAIMLALGALGWANFNLNMFLNVMTPLIMVISFSDSMQLTFAARDRL IAGQDKVTAFKNAVLVVGPACVLTHATAGISFIALQFSDSDLIRKFGEAGLAATVIALLAVLSLVPVFGVLLVRNEKTFA VKFQGADAGVQALRNFCYWIAVRMVGRPGLFSLIAVVFVGSLAVVYASLEPRYRLADQVPDKRQAVAASNRLDAKLTGAN PVNVLIQFPKGASLYAPETLQTIADVHATVEKTAGVGNVWSVETLRRWLAEKAQSSDTATLQEYVNLIPEHLVRRFIDKE QDAVVVAGRVPDLDSSQLLPVVDKLDHELDAVRKKHPGYEVAVTGLAAIAARNSASMIEKLNHGLTIEFALVAMFIGLAF RSWVVMLACILPGIFPVVMSGTVLWAMGEGLQFASVVALTVSFGLGLSATIHFLNRLRMESAPGVSAAIAVERATVLVGP ALILTTVVLACGLVVTVFSDLPSLRLFGWLSAFSMVAALFADLFILRPTAMFLINLSQKLKRKQV
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85064; Mature: 85064
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVRHDNEVHVEKVEQRPADSIAFGLERLGLLAVKVPVLSCIVLLLLIVAAVFGIKRIQ CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE IDDSLSQLFRSDSKEFHQYEEVTKKFPAEEFDVLVVVEGKTLLARQNLEKLRDFVTDLQL ECHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH VEGTRGLVSLFSARQAPAPGKLPAALFPSDLPEGEAYDKFIDTVKSNEIIRGKLLSEDGT HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCC LALVVLSLEPKVVASNDLGKVVGDIRKLMTDDLADTGLNVQLSGVPVMQLEIRNAVERDG EEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHCC LTYNVLGILAGCIIAIIFFRKISFMIVAAFPPLIAIMLALGALGWANFNLNMFLNVMTPL CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IMVISFSDSMQLTFAARDRLIAGQDKVTAFKNAVLVVGPACVLTHATAGISFIALQFSDS HHHHCCCCCCEEEEEHHCCEECCCCHHHHHHCEEEEECHHHHHHHHHCCCEEEEEEECCH DLIRKFGEAGLAATVIALLAVLSLVPVFGVLLVRNEKTFAVKFQGADAGVQALRNFCYWI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHH AVRMVGRPGLFSLIAVVFVGSLAVVYASLEPRYRLADQVPDKRQAVAASNRLDAKLTGAN HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCEEECCCC PVNVLIQFPKGASLYAPETLQTIADVHATVEKTAGVGNVWSVETLRRWLAEKAQSSDTAT CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCHHH LQEYVNLIPEHLVRRFIDKEQDAVVVAGRVPDLDSSQLLPVVDKLDHELDAVRKKHPGYE HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE VAVTGLAAIAARNSASMIEKLNHGLTIEFALVAMFIGLAFRSWVVMLACILPGIFPVVMS EHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTVLWAMGEGLQFASVVALTVSFGLGLSATIHFLNRLRMESAPGVSAAIAVERATVLVGP CEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ALILTTVVLACGLVVTVFSDLPSLRLFGWLSAFSMVAALFADLFILRPTAMFLINLSQKL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRKQV HHCCC >Mature Secondary Structure MLDVRHDNEVHVEKVEQRPADSIAFGLERLGLLAVKVPVLSCIVLLLLIVAAVFGIKRIQ CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE IDDSLSQLFRSDSKEFHQYEEVTKKFPAEEFDVLVVVEGKTLLARQNLEKLRDFVTDLQL ECHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH VEGTRGLVSLFSARQAPAPGKLPAALFPSDLPEGEAYDKFIDTVKSNEIIRGKLLSEDGT HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCC LALVVLSLEPKVVASNDLGKVVGDIRKLMTDDLADTGLNVQLSGVPVMQLEIRNAVERDG EEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHCC LTYNVLGILAGCIIAIIFFRKISFMIVAAFPPLIAIMLALGALGWANFNLNMFLNVMTPL CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IMVISFSDSMQLTFAARDRLIAGQDKVTAFKNAVLVVGPACVLTHATAGISFIALQFSDS HHHHCCCCCCEEEEEHHCCEECCCCHHHHHHCEEEEECHHHHHHHHHCCCEEEEEEECCH DLIRKFGEAGLAATVIALLAVLSLVPVFGVLLVRNEKTFAVKFQGADAGVQALRNFCYWI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHH AVRMVGRPGLFSLIAVVFVGSLAVVYASLEPRYRLADQVPDKRQAVAASNRLDAKLTGAN HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCEEECCCC PVNVLIQFPKGASLYAPETLQTIADVHATVEKTAGVGNVWSVETLRRWLAEKAQSSDTAT CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCHHH LQEYVNLIPEHLVRRFIDKEQDAVVVAGRVPDLDSSQLLPVVDKLDHELDAVRKKHPGYE HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE VAVTGLAAIAARNSASMIEKLNHGLTIEFALVAMFIGLAFRSWVVMLACILPGIFPVVMS EHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTVLWAMGEGLQFASVVALTVSFGLGLSATIHFLNRLRMESAPGVSAAIAVERATVLVGP CEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ALILTTVVLACGLVVTVFSDLPSLRLFGWLSAFSMVAALFADLFILRPTAMFLINLSQKL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRKQV HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA