| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339630
Identifier: 146339630
GI number: 146339630
Start: 2812799
End: 2814385
Strand: Direct
Name: 146339630
Synonym: BRADO2623
Alternate gene names: NA
Gene position: 2812799-2814385 (Clockwise)
Preceding gene: 146339629
Following gene: 146339631
Centisome position: 37.72
GC content: 63.52
Gene sequence:
>1587_bases ATGAGATTCGAAGGCATCGAAACGGTACGCCGCATTCTCTGTGTGTTCCCACGCTACACGTCCTCGTTCGGAACCTTCGA GTACGCCTATCCGCTCACGGACGGCATCCAGGCGTTCATGCCGCCGCAGGGCCTGCTGCTGATCGCGGCCTATCTGCCGA GCTCCTGGCAGGTGCGCTTCATCGACGAGAACATCCGTCCCGCGCGCGATGAGGATTTCGCCTGGGCGGAGGCGGTGTTC GTCAGCGGCATGCACATCCAGCGCCAGCAGATGAACGACATCTGCCGGCGCGCGCATGCGTTCGACCTGCCGGTCGCGCT CGGCGGCCCCTCTGTGAGCGCGTGCCCGGACTATTATCCGGACTTCGACTATCTCCATGTCGGCGAGCTCGGCGATGCCA CCGACGCGCTGATCGAGCGCCTCGCGCACGATGTTTCGCGCCCCGCAAGCCAGGTCGTGCTCCGGACAGGCGAGCGCGTG GCGATGACCGAGTTCCCGGTGCCCGCCTACGAGCTGGCGGAGGTCAGCAAGTATTTCCTTGGCAGCATCCAATATTCCAG CGGCTGCCCGTATCAGTGTGAGTTCTGCGACATTCCCGGTCTGTACGGCCGCAACCCGCGCATCAAGACGCCGCAGCAGA TCATCGCCGAGCTCGACAAGCTCCGGGAATGCGGTGTCACCGGCTCGGTATATTTCGTCGACGACAATTTCATCGGCAAC CGCAAGGCCGCGATGGACCTGCTGCCGCATCTGATCGAATGGCAGAAGCGGACGGGCTATGTGATGCGGCTCGCCTGCGA GGCGACGCTCAACATCGCCAAACGCCCCGAGATCCTGGAGAAGATGCGCGAGGCGTATTTCATCACCATCTTCTGCGGCA TCGAGACGCCGGACCCGGACGCGCTTACGGCGATGCAGAAGGACCACAACATGATGGTGCCGATCCTGGAGGGGATCAGG ACCATCAACAGTTATGGCATGGAGGTCGTCTCCGGCATCATCATGGGGCTCGACACCGACACGCCGCAGACCGCGGACGC GCTGTTGCAGTTCGTCGAGGAGAGCCGGATCCCGCTGCTCACGATCAATCTGCTGCAGGCGCTGCCCAAGACGCCGCTGT GGGACCGGCTCGAGCGCGAGGGCAGGCTGTTGCAGGACGACAGCCGCGACTCCAATATCAAGTTCCTGATGCCCTATGAC GAGGTGGTCTCGGGCTGGCGACGCTGCATGGACGAGGCCTACGAGCCGGAGCGACTCTACGCCCGCTACCAGCATCAATG CGATCACACCTATTCCAATCGCATCAAGGTGCCGGTCAGCGACGAGATGAAGACCTGGCCGAACATCCGCCGCGGCCTCG TCATGATGGGCAAGATTTTCTGGAAGGTCGGCGTGCTCGGCGACTACAAGCGGCCGTTCTGGCGGTTCGCCTGGACCCAG CTGAGGCGCGGCGAGATCGAGAACTTCATCGCGGTCGCGATGATCGCCCATCACCTGATCATGTTCGCGCGCGCCGCCTC GCGCGGCCACCAGAATGCGTCGAACTACTCGATCCGGCTGCGCGAGGCGGCTGTTCCGGCGGCGTGA
Upstream 100 bases:
>100_bases TTCGAAGCCGCCGCAGCGTCTCAACTTTTCCGGAAGTGGTGGCGAACGGCAGGGTCTCGCCGTAAGGTACCCGGATAGCA GGTTGTTGCGAGGACGATCG
Downstream 100 bases:
>100_bases TGCTCACCGGTTTCGCGCTTGAGCGGGTGGTTGGCGCATGAGCTGCCCTGCCGGACGAATCGGGTTTCGGCAGAGCCGGC AGGCGGTGAGCCGCGAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF N [H]
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MRFEGIETVRRILCVFPRYTSSFGTFEYAYPLTDGIQAFMPPQGLLLIAAYLPSSWQVRFIDENIRPARDEDFAWAEAVF VSGMHIQRQQMNDICRRAHAFDLPVALGGPSVSACPDYYPDFDYLHVGELGDATDALIERLAHDVSRPASQVVLRTGERV AMTEFPVPAYELAEVSKYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRIKTPQQIIAELDKLRECGVTGSVYFVDDNFIGN RKAAMDLLPHLIEWQKRTGYVMRLACEATLNIAKRPEILEKMREAYFITIFCGIETPDPDALTAMQKDHNMMVPILEGIR TINSYGMEVVSGIIMGLDTDTPQTADALLQFVEESRIPLLTINLLQALPKTPLWDRLEREGRLLQDDSRDSNIKFLMPYD EVVSGWRRCMDEAYEPERLYARYQHQCDHTYSNRIKVPVSDEMKTWPNIRRGLVMMGKIFWKVGVLGDYKRPFWRFAWTQ LRRGEIENFIAVAMIAHHLIMFARAASRGHQNASNYSIRLREAAVPAA
Sequences:
>Translated_528_residues MRFEGIETVRRILCVFPRYTSSFGTFEYAYPLTDGIQAFMPPQGLLLIAAYLPSSWQVRFIDENIRPARDEDFAWAEAVF VSGMHIQRQQMNDICRRAHAFDLPVALGGPSVSACPDYYPDFDYLHVGELGDATDALIERLAHDVSRPASQVVLRTGERV AMTEFPVPAYELAEVSKYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRIKTPQQIIAELDKLRECGVTGSVYFVDDNFIGN RKAAMDLLPHLIEWQKRTGYVMRLACEATLNIAKRPEILEKMREAYFITIFCGIETPDPDALTAMQKDHNMMVPILEGIR TINSYGMEVVSGIIMGLDTDTPQTADALLQFVEESRIPLLTINLLQALPKTPLWDRLEREGRLLQDDSRDSNIKFLMPYD EVVSGWRRCMDEAYEPERLYARYQHQCDHTYSNRIKVPVSDEMKTWPNIRRGLVMMGKIFWKVGVLGDYKRPFWRFAWTQ LRRGEIENFIAVAMIAHHLIMFARAASRGHQNASNYSIRLREAAVPAA >Mature_528_residues MRFEGIETVRRILCVFPRYTSSFGTFEYAYPLTDGIQAFMPPQGLLLIAAYLPSSWQVRFIDENIRPARDEDFAWAEAVF VSGMHIQRQQMNDICRRAHAFDLPVALGGPSVSACPDYYPDFDYLHVGELGDATDALIERLAHDVSRPASQVVLRTGERV AMTEFPVPAYELAEVSKYFLGSIQYSSGCPYQCEFCDIPGLYGRNPRIKTPQQIIAELDKLRECGVTGSVYFVDDNFIGN RKAAMDLLPHLIEWQKRTGYVMRLACEATLNIAKRPEILEKMREAYFITIFCGIETPDPDALTAMQKDHNMMVPILEGIR TINSYGMEVVSGIIMGLDTDTPQTADALLQFVEESRIPLLTINLLQALPKTPLWDRLEREGRLLQDDSRDSNIKFLMPYD EVVSGWRRCMDEAYEPERLYARYQHQCDHTYSNRIKVPVSDEMKTWPNIRRGLVMMGKIFWKVGVLGDYKRPFWRFAWTQ LRRGEIENFIAVAMIAHHLIMFARAASRGHQNASNYSIRLREAAVPAA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 60419; Mature: 60419
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEGIETVRRILCVFPRYTSSFGTFEYAYPLTDGIQAFMPPQGLLLIAAYLPSSWQVRF CCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHCHHHHCCCCCCEEEEEECCCCCEEEE IDENIRPARDEDFAWAEAVFVSGMHIQRQQMNDICRRAHAFDLPVALGGPSVSACPDYYP ECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC DFDYLHVGELGDATDALIERLAHDVSRPASQVVLRTGERVAMTEFPVPAYELAEVSKYFL CCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH GSIQYSSGCPYQCEFCDIPGLYGRNPRIKTPQQIIAELDKLRECGVTGSVYFVDDNFIGN CCEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC RKAAMDLLPHLIEWQKRTGYVMRLACEATLNIAKRPEILEKMREAYFITIFCGIETPDPD HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHCEEEEEEEECCCCCCH ALTAMQKDHNMMVPILEGIRTINSYGMEVVSGIIMGLDTDTPQTADALLQFVEESRIPLL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE TINLLQALPKTPLWDRLEREGRLLQDDSRDSNIKFLMPYDEVVSGWRRCMDEAYEPERLY EHHHHHHCCCCCCHHHHHHCCCEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHH ARYQHQCDHTYSNRIKVPVSDEMKTWPNIRRGLVMMGKIFWKVGVLGDYKRPFWRFAWTQ HHHHHHHCCHHCCEEECCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LRRGEIENFIAVAMIAHHLIMFARAASRGHQNASNYSIRLREAAVPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MRFEGIETVRRILCVFPRYTSSFGTFEYAYPLTDGIQAFMPPQGLLLIAAYLPSSWQVRF CCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHCHHHHCCCCCCEEEEEECCCCCEEEE IDENIRPARDEDFAWAEAVFVSGMHIQRQQMNDICRRAHAFDLPVALGGPSVSACPDYYP ECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC DFDYLHVGELGDATDALIERLAHDVSRPASQVVLRTGERVAMTEFPVPAYELAEVSKYFL CCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH GSIQYSSGCPYQCEFCDIPGLYGRNPRIKTPQQIIAELDKLRECGVTGSVYFVDDNFIGN CCEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC RKAAMDLLPHLIEWQKRTGYVMRLACEATLNIAKRPEILEKMREAYFITIFCGIETPDPD HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHCEEEEEEEECCCCCCH ALTAMQKDHNMMVPILEGIRTINSYGMEVVSGIIMGLDTDTPQTADALLQFVEESRIPLL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE TINLLQALPKTPLWDRLEREGRLLQDDSRDSNIKFLMPYDEVVSGWRRCMDEAYEPERLY EHHHHHHCCCCCCHHHHHHCCCEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHH ARYQHQCDHTYSNRIKVPVSDEMKTWPNIRRGLVMMGKIFWKVGVLGDYKRPFWRFAWTQ HHHHHHHCCHHCCEEECCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LRRGEIENFIAVAMIAHHLIMFARAASRGHQNASNYSIRLREAAVPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 8467083 [H]