| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339610
Identifier: 146339610
GI number: 146339610
Start: 2788857
End: 2791391
Strand: Direct
Name: 146339610
Synonym: BRADO2602
Alternate gene names: NA
Gene position: 2788857-2791391 (Clockwise)
Preceding gene: 146339609
Following gene: 146339611
Centisome position: 37.4
GC content: 70.81
Gene sequence:
>2535_bases ATGGACGGCCGGAGCGGCCAGGACCAGGGAGCGAGCCCCGCCGCCGGTCGGCCGGCGGTACGCCCTCCCTTGCGCCGCGC TGCCCAATGGGCCCGCGACTATGCCCGGCTGCCGGGAATTCCCGATGAGTTCATCGGCGCCGACGGCCAGCCTCGGCCGG TGTGGACGCGGTTTGCCGACACGTTTGCGGCGCTCGCGCCGACCGACATCGACCGCCGCTTTGCCTCGGCCGATCGGCAT CTTCGCGAAGCCGGCGTCACCTATCGCGCGCCGGGCGACAACGCCGAGAGGTCCTGGGCGCTCAGCCATCTGCCGCTGCT GATCGACGAGACGGAATGGGCGCAGCTGTCGCAGGGCATCGTCCAGCGGGCCGAGTTGCTGGAGCGCGTGCTGCAGGACA TCTACGGCGAAGGCCGGCTGATTGCGAGCGGCGCGCTGCCCGCAGCGGCCGTCGCCGGCTCGAGCGAGTATCTGCGTCCC GTCTGTGGCATCAAGCCGCCGGGCGGCCGCTTCCTCAGCGTCTATGCCGCCGACATCGGTCGGGGTCCCGATGGGCGCTG GTGGGTGCTCAGCGACCGCACGCAGGCGCCGTCGGGCATGGGCTACGCGCTGGAGAACCGCCTGGTGCAGTCGCGCGCCT TCTCCTCGATCTACAAATCGATGAATGCCGAACGGCTGGCGCCGTTCTTCGAGGCGTTCCGCGACTCGCTGCGTGCCAGC GCCGATCGCGACGAGCCGCGGATCGGCGTGCTGACGCCGGGCAGCTTCAGCGAGACCTATTTCGAGCACGCGACGCTTGC GCGCTATCTCGGCTTTCTGCTGGTGGAAGGCGACGATCTCGCCGTCAGCGGTGACCGCGTGCACATCCGCACCGTCGCCG GGCTGAAGCGCGTCGACGTGCTGCTGCGCCGGCTGGATTCCAACTCGCTCGATCCGCTCGAGCTCGACGCCGCCTCGCGG CTCGGCGTCGCCGGCCTGATGGACGTGGTGCGCAAGGGCGGCGTGGTGATCGCCAACATGCCGGGCTCCGGCGTGCTGGA GGCGCGCGCGCTGCTCGGCTTCCTGCCGAGCCTGTCGCGGCGCGTGCTCGGCGAGGATCTCAAGATCCCGCACATCGCGA CCTGGTGGTGCGGCCAGAAATCGGCGCGCGACGAGGTGCTGTCGCGGCTCGACGAGCTCGCCATCGAGGGCGCCTATGGC CGCGCCGTGCCGGGCTTTGCGAGCAGCGGCCCGCTGCTCGCGGGCGAACTGTCGGCGGCGGAGCGCGAGCGGCTGCGCGC GGCGATCATCCAGCGCGGCATCGACTATGTCGGCCAGGAGGTGGTGCGGCTGTCGACCACGCCGGTGTGGGAGGACGGCA AGATCGCGCCGCGTCCGTTCGTGCTGCGCGTGTTCGCGGCCGCGACGCCCGATGGCTGGACGGTGATGCCCGGCGGCTTC TGCCGCATCGCCGACAAGCTCGATGCGCGCGCGGTGTCGATGGGTGACGGCGCGAGCGCCGCCGACGTCTGGGTCGTCGG TGACAAGGCGGTGGCGGCGCGCAGCCTGCTGCCGGGCTCCGACAATGTCCGCATCCGCCGCATCGCCGGCGTGCTGCCGA GCCGGGCCGCCGACAATCTGTTCTGGCTCGGCCGCTATCTCGAGCGCGCCGAGGCGACGTTGCGATTGATCCGCGCGCTT GCCGCCCAGCACCGCGATCCCGGCAAGGGCTCGCCGGCGCAGCTCAACACCGCCGAGCGCATCCAGCGGCTGCTGCTCGC CTGGGGCGCCATCGCGCAGACCTCGCGCACCCAAGGGGCGCGCGTCGCCGACGAGGCGCTGCAGGCGGAGGATCAGTTCG GCTCGGCGCTGTCGCTGTTGAAGTCGGCACAGCGCACCGCGATCTCGCTGCGCGAGCGGCTGTCGCCGGATGCCTGGCAG GTCATCACCGAGATGTCGAACAGGCTCGCGCAGGACGTCGACGACGACGAGGCCGCCGTGAGCACGGCCGAGCTGCTGCT CGAGAAGCTCGCGAGTTTCGCCGGTCTTGCCCAGGAGAACATGAACCGTGCCGCCGGCTGGCGCTTCCTCGACATGGGCC GCCGCGCCGAGCGCGCCATCAACACCGCGCGCTTCGCGCGGCAGTTCGGCTATGACGAGGCGACGCCGGAAGATCTCGAT GTCCTGCTCACGCTGGTCGATTGCCAGATCACCTATCGCTCGCGCTATCTGATCGGGCCGTCGCTGGCGCCGATCCGCGA TCTCGTCGTGCTCGATACCTACAATCCGCGCTCGGTCGCTTTCCAGATCCAGGCCCTGAGCGAGCATATCGCAGGGCTGC CGGTGCTGAAGGAGAACGGCTTGATCGAGCGGCCGCAGCGGCTCGCGGTCTCGCTGGGCGCACGGCTGACGGCGGCGGAG GCCGCGCATCTCGACGGCCGTACGCTGTTCGCGCTGGAGCAGGACCTGCTCAATCTGTCGGAAGCGATCGGCCAGCACTA CTTCCCGCACGGCCCCAATGCGACGCGGCCGGAAAAGCTCACGGGCCTCGCGTGA
Upstream 100 bases:
>100_bases GATGCCGCCGGAAGAACGCACAAATGAATTCCCGATGACCCTCGACTTGCGCAGGCCGAACCTGCATTGATGGAAAGGAG CGTGCGCGGAGGATCAGGGT
Downstream 100 bases:
>100_bases TCTACGACATCCGACATGTCACCACCTATGAGTATGAGAGCGCGGTGAGCTTCGCGCGCTGCTCGCTGCGGCTGGAGCCG CTCAGCGGCGACGGTCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MDGRSGQDQGASPAAGRPAVRPPLRRAAQWARDYARLPGIPDEFIGADGQPRPVWTRFADTFAALAPTDIDRRFASADRH LREAGVTYRAPGDNAERSWALSHLPLLIDETEWAQLSQGIVQRAELLERVLQDIYGEGRLIASGALPAAAVAGSSEYLRP VCGIKPPGGRFLSVYAADIGRGPDGRWWVLSDRTQAPSGMGYALENRLVQSRAFSSIYKSMNAERLAPFFEAFRDSLRAS ADRDEPRIGVLTPGSFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRVDVLLRRLDSNSLDPLELDAASR LGVAGLMDVVRKGGVVIANMPGSGVLEARALLGFLPSLSRRVLGEDLKIPHIATWWCGQKSARDEVLSRLDELAIEGAYG RAVPGFASSGPLLAGELSAAERERLRAAIIQRGIDYVGQEVVRLSTTPVWEDGKIAPRPFVLRVFAAATPDGWTVMPGGF CRIADKLDARAVSMGDGASAADVWVVGDKAVAARSLLPGSDNVRIRRIAGVLPSRAADNLFWLGRYLERAEATLRLIRAL AAQHRDPGKGSPAQLNTAERIQRLLLAWGAIAQTSRTQGARVADEALQAEDQFGSALSLLKSAQRTAISLRERLSPDAWQ VITEMSNRLAQDVDDDEAAVSTAELLLEKLASFAGLAQENMNRAAGWRFLDMGRRAERAINTARFARQFGYDEATPEDLD VLLTLVDCQITYRSRYLIGPSLAPIRDLVVLDTYNPRSVAFQIQALSEHIAGLPVLKENGLIERPQRLAVSLGARLTAAE AAHLDGRTLFALEQDLLNLSEAIGQHYFPHGPNATRPEKLTGLA
Sequences:
>Translated_844_residues MDGRSGQDQGASPAAGRPAVRPPLRRAAQWARDYARLPGIPDEFIGADGQPRPVWTRFADTFAALAPTDIDRRFASADRH LREAGVTYRAPGDNAERSWALSHLPLLIDETEWAQLSQGIVQRAELLERVLQDIYGEGRLIASGALPAAAVAGSSEYLRP VCGIKPPGGRFLSVYAADIGRGPDGRWWVLSDRTQAPSGMGYALENRLVQSRAFSSIYKSMNAERLAPFFEAFRDSLRAS ADRDEPRIGVLTPGSFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRVDVLLRRLDSNSLDPLELDAASR LGVAGLMDVVRKGGVVIANMPGSGVLEARALLGFLPSLSRRVLGEDLKIPHIATWWCGQKSARDEVLSRLDELAIEGAYG RAVPGFASSGPLLAGELSAAERERLRAAIIQRGIDYVGQEVVRLSTTPVWEDGKIAPRPFVLRVFAAATPDGWTVMPGGF CRIADKLDARAVSMGDGASAADVWVVGDKAVAARSLLPGSDNVRIRRIAGVLPSRAADNLFWLGRYLERAEATLRLIRAL AAQHRDPGKGSPAQLNTAERIQRLLLAWGAIAQTSRTQGARVADEALQAEDQFGSALSLLKSAQRTAISLRERLSPDAWQ VITEMSNRLAQDVDDDEAAVSTAELLLEKLASFAGLAQENMNRAAGWRFLDMGRRAERAINTARFARQFGYDEATPEDLD VLLTLVDCQITYRSRYLIGPSLAPIRDLVVLDTYNPRSVAFQIQALSEHIAGLPVLKENGLIERPQRLAVSLGARLTAAE AAHLDGRTLFALEQDLLNLSEAIGQHYFPHGPNATRPEKLTGLA >Mature_844_residues MDGRSGQDQGASPAAGRPAVRPPLRRAAQWARDYARLPGIPDEFIGADGQPRPVWTRFADTFAALAPTDIDRRFASADRH LREAGVTYRAPGDNAERSWALSHLPLLIDETEWAQLSQGIVQRAELLERVLQDIYGEGRLIASGALPAAAVAGSSEYLRP VCGIKPPGGRFLSVYAADIGRGPDGRWWVLSDRTQAPSGMGYALENRLVQSRAFSSIYKSMNAERLAPFFEAFRDSLRAS ADRDEPRIGVLTPGSFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRVDVLLRRLDSNSLDPLELDAASR LGVAGLMDVVRKGGVVIANMPGSGVLEARALLGFLPSLSRRVLGEDLKIPHIATWWCGQKSARDEVLSRLDELAIEGAYG RAVPGFASSGPLLAGELSAAERERLRAAIIQRGIDYVGQEVVRLSTTPVWEDGKIAPRPFVLRVFAAATPDGWTVMPGGF CRIADKLDARAVSMGDGASAADVWVVGDKAVAARSLLPGSDNVRIRRIAGVLPSRAADNLFWLGRYLERAEATLRLIRAL AAQHRDPGKGSPAQLNTAERIQRLLLAWGAIAQTSRTQGARVADEALQAEDQFGSALSLLKSAQRTAISLRERLSPDAWQ VITEMSNRLAQDVDDDEAAVSTAELLLEKLASFAGLAQENMNRAAGWRFLDMGRRAERAINTARFARQFGYDEATPEDLD VLLTLVDCQITYRSRYLIGPSLAPIRDLVVLDTYNPRSVAFQIQALSEHIAGLPVLKENGLIERPQRLAVSLGARLTAAE AAHLDGRTLFALEQDLLNLSEAIGQHYFPHGPNATRPEKLTGLA
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 91790; Mature: 91790
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGRSGQDQGASPAAGRPAVRPPLRRAAQWARDYARLPGIPDEFIGADGQPRPVWTRFAD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHH TFAALAPTDIDRRFASADRHLREAGVTYRAPGDNAERSWALSHLPLLIDETEWAQLSQGI HHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCEEECCCHHHHHHHHH VQRAELLERVLQDIYGEGRLIASGALPAAAVAGSSEYLRPVCGIKPPGGRFLSVYAADIG HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHCCCCCCCCCEEEEEEHHCC RGPDGRWWVLSDRTQAPSGMGYALENRLVQSRAFSSIYKSMNAERLAPFFEAFRDSLRAS CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC ADRDEPRIGVLTPGSFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRVDV CCCCCCCEEEECCCCCHHHHHHHHHHHHHHCEEEECCCCEEECCCEEEEEHHHHHHHHHH LLRRLDSNSLDPLELDAASRLGVAGLMDVVRKGGVVIANMPGSGVLEARALLGFLPSLSR HHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH RVLGEDLKIPHIATWWCGQKSARDEVLSRLDELAIEGAYGRAVPGFASSGPLLAGELSAA HHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHH ERERLRAAIIQRGIDYVGQEVVRLSTTPVWEDGKIAPRPFVLRVFAAATPDGWTVMPGGF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHEEECCCCCCCEECCCCH CRIADKLDARAVSMGDGASAADVWVVGDKAVAARSLLPGSDNVRIRRIAGVLPSRAADNL HHHHHHHCCCEEECCCCCCCCEEEEECCHHHHHHHCCCCCCCCEEEHHHHCCCCCHHHHH FWLGRYLERAEATLRLIRALAAQHRDPGKGSPAQLNTAERIQRLLLAWGAIAQTSRTQGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC RVADEALQAEDQFGSALSLLKSAQRTAISLRERLSPDAWQVITEMSNRLAQDVDDDEAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH STAELLLEKLASFAGLAQENMNRAAGWRFLDMGRRAERAINTARFARQFGYDEATPEDLD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VLLTLVDCQITYRSRYLIGPSLAPIRDLVVLDTYNPRSVAFQIQALSEHIAGLPVLKENG HHHHHHHHEEEECCEEEECCCCCCHHCEEEEECCCCCHHEEHHHHHHHHHCCCCEECCCC LIERPQRLAVSLGARLTAAEAAHLDGRTLFALEQDLLNLSEAIGQHYFPHGPNATRPEKL CCCCHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH TGLA CCCC >Mature Secondary Structure MDGRSGQDQGASPAAGRPAVRPPLRRAAQWARDYARLPGIPDEFIGADGQPRPVWTRFAD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHH TFAALAPTDIDRRFASADRHLREAGVTYRAPGDNAERSWALSHLPLLIDETEWAQLSQGI HHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCEEECCCHHHHHHHHH VQRAELLERVLQDIYGEGRLIASGALPAAAVAGSSEYLRPVCGIKPPGGRFLSVYAADIG HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHCCCCCCCCCEEEEEEHHCC RGPDGRWWVLSDRTQAPSGMGYALENRLVQSRAFSSIYKSMNAERLAPFFEAFRDSLRAS CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC ADRDEPRIGVLTPGSFSETYFEHATLARYLGFLLVEGDDLAVSGDRVHIRTVAGLKRVDV CCCCCCCEEEECCCCCHHHHHHHHHHHHHHCEEEECCCCEEECCCEEEEEHHHHHHHHHH LLRRLDSNSLDPLELDAASRLGVAGLMDVVRKGGVVIANMPGSGVLEARALLGFLPSLSR HHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH RVLGEDLKIPHIATWWCGQKSARDEVLSRLDELAIEGAYGRAVPGFASSGPLLAGELSAA HHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHH ERERLRAAIIQRGIDYVGQEVVRLSTTPVWEDGKIAPRPFVLRVFAAATPDGWTVMPGGF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHEEECCCCCCCEECCCCH CRIADKLDARAVSMGDGASAADVWVVGDKAVAARSLLPGSDNVRIRRIAGVLPSRAADNL HHHHHHHCCCEEECCCCCCCCEEEEECCHHHHHHHCCCCCCCCEEEHHHHCCCCCHHHHH FWLGRYLERAEATLRLIRALAAQHRDPGKGSPAQLNTAERIQRLLLAWGAIAQTSRTQGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC RVADEALQAEDQFGSALSLLKSAQRTAISLRERLSPDAWQVITEMSNRLAQDVDDDEAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH STAELLLEKLASFAGLAQENMNRAAGWRFLDMGRRAERAINTARFARQFGYDEATPEDLD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VLLTLVDCQITYRSRYLIGPSLAPIRDLVVLDTYNPRSVAFQIQALSEHIAGLPVLKENG HHHHHHHHEEEECCEEEECCCCCCHHCEEEEECCCCCHHEEHHHHHHHHHCCCCEECCCC LIERPQRLAVSLGARLTAAEAAHLDGRTLFALEQDLLNLSEAIGQHYFPHGPNATRPEKL CCCCHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH TGLA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]