Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146339611

Identifier: 146339611

GI number: 146339611

Start: 2791388

End: 2792266

Strand: Direct

Name: 146339611

Synonym: BRADO2603

Alternate gene names: NA

Gene position: 2791388-2792266 (Clockwise)

Preceding gene: 146339610

Following gene: 146339612

Centisome position: 37.44

GC content: 67.46

Gene sequence:

>879_bases
GTGATCTACGACATCCGACATGTCACCACCTATGAGTATGAGAGCGCGGTGAGCTTCGCGCGCTGCTCGCTGCGGCTGGA
GCCGCTCAGCGGCGACGGTCAGGAGCTGATCTCGCACAGCGTCGACATCCGGCCGCGCCCCTCGGAGCGCACGGCGCGCC
GCGACTTCTTCGGGACGCTGACCGAGAGCATCGTGATCGACACCCAGCACCGCCATCTGCGGATCGATTCGCGCTCGCGG
GTGAAGCTGTCGCGCAAGCCGCCGGAGCGCGATGCGTCGAGCGCGACCTGGGAGCAGGTGCGCGACGCCGCGTTCGAGGC
GACGAGTCTCGGCCCGTCGTCGCCGATCGGCTACGTTTTCGAAAGTGCGCTGGTGCCGGTGCTCAAGCCCGTCACGGACT
ACGCGGCGGCGAGCTTTCCGGCCGGCACCGGCATCCTTGCAGGGGGCGCCGACCTGATGCGGCGCATCCGCAAGGAGTTC
AGATACGATCCGAAGGCCACGGTGATCTCGACGCCGCTGCGCGAGGTGTTCGATAATCGCCATGGCGTCTGCCAGGATTT
CGCGCATGTCATGATCGCCGGCCTGCGCGGCCTCGGTCTGCCCGCGGCCTATGTCAGCGGCTATCTGCGCACGATTCCGC
CCGAGGGCCAGCCGCGGCTGCAGGGTGCCGACGCGACGCACGCGTGGGTGTCGCTGTGGTGCGGCGAGGCGCTCGGCTGG
ATCGGCTTCGATCCCACCAACGATCTCGTCGTCGGCAATGATCATATCATCCTCGGCATGGGCCGCGACTTCTCCGACGT
CTCGCCGGTTGACGGCATCATCGTCGGCTCGCCCAAGCAAAAGCTCGGCGTCGCCGTCGACGTCGTGATGGTCGAGTAG

Upstream 100 bases:

>100_bases
CGCTGGAGCAGGACCTGCTCAATCTGTCGGAAGCGATCGGCCAGCACTACTTCCCGCACGGCCCCAATGCGACGCGGCCG
GAAAAGCTCACGGGCCTCGC

Downstream 100 bases:

>100_bases
GGCGGTTCCCGGAGCGGGAACGAGCGGAACATTTCCACTGCATCTCACTTGACCCGCCCGAGGGGCTTGAACCGGGGGCT
GGCTGACCCTTTCGAGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTLTESIVIDTQHRHLRIDSRSR
VKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVFESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEF
RYDPKATVISTPLREVFDNRHGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW
IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE

Sequences:

>Translated_292_residues
MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTLTESIVIDTQHRHLRIDSRSR
VKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVFESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEF
RYDPKATVISTPLREVFDNRHGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW
IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE
>Mature_292_residues
MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTLTESIVIDTQHRHLRIDSRSR
VKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVFESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEF
RYDPKATVISTPLREVFDNRHGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW
IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0607 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 32017; Mature: 32017

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTL
CEEEEEEEEEHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH
TESIVIDTQHRHLRIDSRSRVKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVF
HHHEEEECCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
ESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEFRYDPKATVISTPLREVFDNR
HHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCC
HGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW
CCHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE
CCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEECCCHHHHCEEEEEEEEC
>Mature Secondary Structure
MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTL
CEEEEEEEEEHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH
TESIVIDTQHRHLRIDSRSRVKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVF
HHHEEEECCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
ESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEFRYDPKATVISTPLREVFDNR
HHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCC
HGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW
CCHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE
CCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEECCCHHHHCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]