| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ppc [H]
Identifier: 146339589
GI number: 146339589
Start: 2762716
End: 2765517
Strand: Direct
Name: ppc [H]
Synonym: BRADO2580
Alternate gene names: 146339589
Gene position: 2762716-2765517 (Clockwise)
Preceding gene: 146339588
Following gene: 146339594
Centisome position: 37.05
GC content: 65.49
Gene sequence:
>2802_bases ATGCTGGAGAGCGTATCCATGTCGCCGCAAGCCATCACAGAGGAAATCCGTCCCAACCGCGCCGCCGACGTGCAGGCCAT GGAAGCGGACGCGCAGCTCCGCGAGGATATCCGGCTGCTCGGCCGCATCCTCGGCGACACCGTTCGCGACCAGGAGGGCG CCGACGTGTTCGATCTGGTCGAGCGCATCCGCCAGACCTCGGTGCGCTTCCACCGCGATGAGGACCGTCAGGCGCGGCGC GAGCTCGAGCAGATCCTCGACGGCATGACCATTGCGGAGACTGTCCGCATCGTCCGCGCCTTCAGCTATTTCTCCCACCT CGCCAACATCGCCGAGGACCAGAACAACATCCGCCGCATGCGCGCCAAGAGCGATGCCAATGGCGGCGCCGGCATGCTGG CGGCCACGCTCGCCCATGCCAAATCGGCGGGATTCGACGCGGCCGAGTTGCGCAAGTTCTTCTCGACCGCATTGGTCAGC CCCGTCCTTACCGCGCACCCGACCGAGGTGCGGCGCAAGAGTACGATGGACCGCGAGATGGAGGTCGCGATGCTGCTCGA CCGCCGCGAGCGGATGCAGCTGACGCCGGAGGAGCGCGAGGCCAATGACGAGGCGCTGCGCCGCGCGGTGCTGACCCTGT GGCAGACCAACCTCTTGCGCCGGACCAAGCTGACGGTTCTCGACGAGGTCACCAATGGGCTGTCGTTCTACGACTACACC TTCCTGCGCGAGGTGCCGCGGCTGTTGTGCTCGCTCGAGGACCGGCTCAACGACGGCGCTGAGGTGGCGGGCGACCTCGC GTCGTTCCTGCGCATGGGCAGCTGGATCGGCGGCGACCGCGACGGCAATCCGTTCGTCACCGCCGAGGTCATGCGCGGCA CGCTGAAGCTGCAATCCAGCCTGGCGATGCACTACTACCTCGAAGAGCTGCACCTGCTCGGCAGCGAGCTGTCGATTGCC GCGCATCTCGCCGATGTTTCGGAGGAGCTGCGCGCGCTCGCGGAGAAGTCTCCCGACACCTCGCCGCACCGGCGCGGCGA GCCTTACCGGCTGGCGGTGTCCGGCATCTATGCCCGGCTGGCCGCGACCGCCAAGAAGCTCGGCATCGAGATCAGCCGTC TGCCGGTGGCTGATGTCGCGCCCTATGACAGCGTCAAGGAGCTGCAAGACGATCTCGACGTGCTGCACCATTCGCTGATC GCGAACAATGCCGAGGTGATCGCGCGCGGACGGTTGCGGCTGCTGCGGCGCGCGGTGGACTGCTTCGGCTTCCATCTGGC GCGGCTCGACATCCGCCAGAACTCGGCTGTGCACGAGCGCACGGTGGCGGAGCTGATCGATACCGCCATGCCCGGCATGT CCTACTTGGCGCTAAGCGAGGATGCACGGGTCGGCTTGCTTGTCAACGAGCTGCGCAATACGCGCCCGCTGGTGTCGCAT TTCGTCAAGTACAGCGACGAGACCATCGGCGAGCTCGAGCTGTTCCGTGCCGCCGCCGAGGCGCATGCCACGTTTGGCGC CGACGTGATCTCCCAGTGCATCATCTCGATGTGCAAGGGCATGTCCGACATGCTGGAGGTCGCGCTGCTCTTGAAGGAGG TCGGGCTGATCGACCCGTCGGGGCGCTGCGCTGTCAACATCGTGCCGCTGTTCGAAACCATCGAGGATCTGCAGGCGTCC AGCGGCATCATGGACCGGATGCTGGCGCTGCACGACTATCGCCGCCTGGTCGACAGCCGCGGCGCCGTGCAGGAGGTCAT GCTCGGCTATTCCGACAGCAACAAGGATGGCGGCTTCGTCACCTCCGGCTGGGAGCTGTACAAGGCCGAGATCCATCTCG TCGAAATCTTCGAGCGCCATCACGTCAGGCTGCGGCTGTTCCACGGCCGTGGCGGCTCGGTCGGCCGCGGCGGCGGACCG AGCTACGACGCCATCATCGCGCAGCCCGGCGGCGCCGTGAACGGCCAGATCCGCATCACCGAGCAGGGCGAGATCATCTC CAGCAAATATTCCAACGCGGAAGTCGGGCGCTATAATCTGGAGATCCTGGCAGCGGCGACGCTCGAAGCCAGCCTGCTGC ATCCACGCCAGCCGGCGCCGAAACGCGAATATCTCACCGCGATGGATCGTCTGTCGGAGCTTGCATTCAAGGCCTATCGT GGCCTTGTCTACGAGACCGATGGCTTCGTCGATTATTTCTGGTCCTCGACCGTCATCAACGAGATCGCGACCCTGAACAT CGGCAGCCGTCCGGCGTCGCGCAAGAAGACCCGCGCGATCGAGGATCTGCGCGCGATCCCCTGGGTGTTCTCCTGGGCGC AGTGCCGGCTGATGCTGCCGGGCTGGTACGGCTTCGGCAGCGCGGTCGAGGCCTGGATCGCAGAGAATCCGGAGCAGGGC ATGCCGTTCCTACGCGAGCTCTATCAGGAGTGGCCGTTCTTCCGCATGCTGCTGTCGAACATGGACATGGTGCTCGCCAA GAGCTCGATCGCCATCGCCTCGCGCTATGCTGAGCTGGTGCCGGACGAAGCCTTGCGCGAACAGATCTTCGGCCGCATCC GCCGCGAATGGAACCTGGTGATCGAGACCTTGCTCGACATCACCGGCCAGGAACGGCTCCTGCAGGGCAATCCGCTGCTC GAGCGCTCGGTGCGCAACCGCTTCCCATATCTCGACCCGCTCAATCACGTGCAGGTCGAGCTGTTGAAAGAGCACCGCGC GCAGAACCCGGACGAGCAGGTGCTGCGCGGGATTCAGCTGACCATCAACGGCATCTCGGCGGGCTTGAGGAATACGGGGT AG
Upstream 100 bases:
>100_bases GTGTGCGTGCTGGTCGAGCGCATCGAATAAGGCAGGCGACGCCTCTTTCTTGATCTTGCGCTGCAATGCAGATACGGCAG ACTGACCCGTAAATGGGCAG
Downstream 100 bases:
>100_bases GCGAGAGCTCTGCATCGACGCCGTCGTGGCCCGGCTTGTCCATTGCAGGCGCACGGTCAAATACGGCGCCCTCTCCCCTT GTGGGAGAGGGCATCGCCGG
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 933; Mature: 933
Protein sequence:
>933_residues MLESVSMSPQAITEEIRPNRAADVQAMEADAQLREDIRLLGRILGDTVRDQEGADVFDLVERIRQTSVRFHRDEDRQARR ELEQILDGMTIAETVRIVRAFSYFSHLANIAEDQNNIRRMRAKSDANGGAGMLAATLAHAKSAGFDAAELRKFFSTALVS PVLTAHPTEVRRKSTMDREMEVAMLLDRRERMQLTPEEREANDEALRRAVLTLWQTNLLRRTKLTVLDEVTNGLSFYDYT FLREVPRLLCSLEDRLNDGAEVAGDLASFLRMGSWIGGDRDGNPFVTAEVMRGTLKLQSSLAMHYYLEELHLLGSELSIA AHLADVSEELRALAEKSPDTSPHRRGEPYRLAVSGIYARLAATAKKLGIEISRLPVADVAPYDSVKELQDDLDVLHHSLI ANNAEVIARGRLRLLRRAVDCFGFHLARLDIRQNSAVHERTVAELIDTAMPGMSYLALSEDARVGLLVNELRNTRPLVSH FVKYSDETIGELELFRAAAEAHATFGADVISQCIISMCKGMSDMLEVALLLKEVGLIDPSGRCAVNIVPLFETIEDLQAS SGIMDRMLALHDYRRLVDSRGAVQEVMLGYSDSNKDGGFVTSGWELYKAEIHLVEIFERHHVRLRLFHGRGGSVGRGGGP SYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEVGRYNLEILAAATLEASLLHPRQPAPKREYLTAMDRLSELAFKAYR GLVYETDGFVDYFWSSTVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVEAWIAENPEQG MPFLRELYQEWPFFRMLLSNMDMVLAKSSIAIASRYAELVPDEALREQIFGRIRREWNLVIETLLDITGQERLLQGNPLL ERSVRNRFPYLDPLNHVQVELLKEHRAQNPDEQVLRGIQLTINGISAGLRNTG
Sequences:
>Translated_933_residues MLESVSMSPQAITEEIRPNRAADVQAMEADAQLREDIRLLGRILGDTVRDQEGADVFDLVERIRQTSVRFHRDEDRQARR ELEQILDGMTIAETVRIVRAFSYFSHLANIAEDQNNIRRMRAKSDANGGAGMLAATLAHAKSAGFDAAELRKFFSTALVS PVLTAHPTEVRRKSTMDREMEVAMLLDRRERMQLTPEEREANDEALRRAVLTLWQTNLLRRTKLTVLDEVTNGLSFYDYT FLREVPRLLCSLEDRLNDGAEVAGDLASFLRMGSWIGGDRDGNPFVTAEVMRGTLKLQSSLAMHYYLEELHLLGSELSIA AHLADVSEELRALAEKSPDTSPHRRGEPYRLAVSGIYARLAATAKKLGIEISRLPVADVAPYDSVKELQDDLDVLHHSLI ANNAEVIARGRLRLLRRAVDCFGFHLARLDIRQNSAVHERTVAELIDTAMPGMSYLALSEDARVGLLVNELRNTRPLVSH FVKYSDETIGELELFRAAAEAHATFGADVISQCIISMCKGMSDMLEVALLLKEVGLIDPSGRCAVNIVPLFETIEDLQAS SGIMDRMLALHDYRRLVDSRGAVQEVMLGYSDSNKDGGFVTSGWELYKAEIHLVEIFERHHVRLRLFHGRGGSVGRGGGP SYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEVGRYNLEILAAATLEASLLHPRQPAPKREYLTAMDRLSELAFKAYR GLVYETDGFVDYFWSSTVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVEAWIAENPEQG MPFLRELYQEWPFFRMLLSNMDMVLAKSSIAIASRYAELVPDEALREQIFGRIRREWNLVIETLLDITGQERLLQGNPLL ERSVRNRFPYLDPLNHVQVELLKEHRAQNPDEQVLRGIQLTINGISAGLRNTG >Mature_933_residues MLESVSMSPQAITEEIRPNRAADVQAMEADAQLREDIRLLGRILGDTVRDQEGADVFDLVERIRQTSVRFHRDEDRQARR ELEQILDGMTIAETVRIVRAFSYFSHLANIAEDQNNIRRMRAKSDANGGAGMLAATLAHAKSAGFDAAELRKFFSTALVS PVLTAHPTEVRRKSTMDREMEVAMLLDRRERMQLTPEEREANDEALRRAVLTLWQTNLLRRTKLTVLDEVTNGLSFYDYT FLREVPRLLCSLEDRLNDGAEVAGDLASFLRMGSWIGGDRDGNPFVTAEVMRGTLKLQSSLAMHYYLEELHLLGSELSIA AHLADVSEELRALAEKSPDTSPHRRGEPYRLAVSGIYARLAATAKKLGIEISRLPVADVAPYDSVKELQDDLDVLHHSLI ANNAEVIARGRLRLLRRAVDCFGFHLARLDIRQNSAVHERTVAELIDTAMPGMSYLALSEDARVGLLVNELRNTRPLVSH FVKYSDETIGELELFRAAAEAHATFGADVISQCIISMCKGMSDMLEVALLLKEVGLIDPSGRCAVNIVPLFETIEDLQAS SGIMDRMLALHDYRRLVDSRGAVQEVMLGYSDSNKDGGFVTSGWELYKAEIHLVEIFERHHVRLRLFHGRGGSVGRGGGP SYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEVGRYNLEILAAATLEASLLHPRQPAPKREYLTAMDRLSELAFKAYR GLVYETDGFVDYFWSSTVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVEAWIAENPEQG MPFLRELYQEWPFFRMLLSNMDMVLAKSSIAIASRYAELVPDEALREQIFGRIRREWNLVIETLLDITGQERLLQGNPLL ERSVRNRFPYLDPLNHVQVELLKEHRAQNPDEQVLRGIQLTINGISAGLRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=916, Percent_Identity=35.3711790393013, Blast_Score=462, Evalue=1e-131,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 104736; Mature: 104736
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESVSMSPQAITEEIRPNRAADVQAMEADAQLREDIRLLGRILGDTVRDQEGADVFDLV CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ERIRQTSVRFHRDEDRQARRELEQILDGMTIAETVRIVRAFSYFSHLANIAEDQNNIRRM HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAKSDANGGAGMLAATLAHAKSAGFDAAELRKFFSTALVSPVLTAHPTEVRRKSTMDREM HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EVAMLLDRRERMQLTPEEREANDEALRRAVLTLWQTNLLRRTKLTVLDEVTNGLSFYDYT HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FLREVPRLLCSLEDRLNDGAEVAGDLASFLRMGSWIGGDRDGNPFVTAEVMRGTLKLQSS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHH LAMHYYLEELHLLGSELSIAAHLADVSEELRALAEKSPDTSPHRRGEPYRLAVSGIYARL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHH AATAKKLGIEISRLPVADVAPYDSVKELQDDLDVLHHSLIANNAEVIARGRLRLLRRAVD HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH CFGFHLARLDIRQNSAVHERTVAELIDTAMPGMSYLALSEDARVGLLVNELRNTRPLVSH HHHHHHHHEEHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCHHHHHH FVKYSDETIGELELFRAAAEAHATFGADVISQCIISMCKGMSDMLEVALLLKEVGLIDPS HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC GRCAVNIVPLFETIEDLQASSGIMDRMLALHDYRRLVDSRGAVQEVMLGYSDSNKDGGFV CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE TSGWELYKAEIHLVEIFERHHVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRIT ECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEE EQGEIISSKYSNAEVGRYNLEILAAATLEASLLHPRQPAPKREYLTAMDRLSELAFKAYR CCCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GLVYETDGFVDYFWSSTVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLP CCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECC GWYGFGSAVEAWIAENPEQGMPFLRELYQEWPFFRMLLSNMDMVLAKSSIAIASRYAELV CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC PDEALREQIFGRIRREWNLVIETLLDITGQERLLQGNPLLERSVRNRFPYLDPLNHVQVE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH LLKEHRAQNPDEQVLRGIQLTINGISAGLRNTG HHHHHCCCCCHHHHHHHHHHEEEHHHCCCCCCC >Mature Secondary Structure MLESVSMSPQAITEEIRPNRAADVQAMEADAQLREDIRLLGRILGDTVRDQEGADVFDLV CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ERIRQTSVRFHRDEDRQARRELEQILDGMTIAETVRIVRAFSYFSHLANIAEDQNNIRRM HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAKSDANGGAGMLAATLAHAKSAGFDAAELRKFFSTALVSPVLTAHPTEVRRKSTMDREM HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EVAMLLDRRERMQLTPEEREANDEALRRAVLTLWQTNLLRRTKLTVLDEVTNGLSFYDYT HHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FLREVPRLLCSLEDRLNDGAEVAGDLASFLRMGSWIGGDRDGNPFVTAEVMRGTLKLQSS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHH LAMHYYLEELHLLGSELSIAAHLADVSEELRALAEKSPDTSPHRRGEPYRLAVSGIYARL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHH AATAKKLGIEISRLPVADVAPYDSVKELQDDLDVLHHSLIANNAEVIARGRLRLLRRAVD HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH CFGFHLARLDIRQNSAVHERTVAELIDTAMPGMSYLALSEDARVGLLVNELRNTRPLVSH HHHHHHHHEEHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCHHHHHH FVKYSDETIGELELFRAAAEAHATFGADVISQCIISMCKGMSDMLEVALLLKEVGLIDPS HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC GRCAVNIVPLFETIEDLQASSGIMDRMLALHDYRRLVDSRGAVQEVMLGYSDSNKDGGFV CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEE TSGWELYKAEIHLVEIFERHHVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRIT ECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEE EQGEIISSKYSNAEVGRYNLEILAAATLEASLLHPRQPAPKREYLTAMDRLSELAFKAYR CCCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GLVYETDGFVDYFWSSTVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLP CCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECC GWYGFGSAVEAWIAENPEQGMPFLRELYQEWPFFRMLLSNMDMVLAKSSIAIASRYAELV CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC PDEALREQIFGRIRREWNLVIETLLDITGQERLLQGNPLLERSVRNRFPYLDPLNHVQVE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH LLKEHRAQNPDEQVLRGIQLTINGISAGLRNTG HHHHHCCCCCHHHHHHHHHHEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]