Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is livM [H]
Identifier: 146339550
GI number: 146339550
Start: 2715662
End: 2716666
Strand: Direct
Name: livM [H]
Synonym: BRADO2541
Alternate gene names: 146339550
Gene position: 2715662-2716666 (Clockwise)
Preceding gene: 146339549
Following gene: 146339551
Centisome position: 36.42
GC content: 64.88
Gene sequence:
>1005_bases ATGGACAAGGCATTCGTTCAACGCCGCCGGCGTGATCTCATCCTCGCCGCATTCCTCGCCGCGATGGCCGCGGCCGTGCC GTTCTTCGTCAAGGACGTCTACGTCCAGAACATCATGGTGCTGACCCTGATGTATGCGGCGCTGTCGCAGAGCTGGAACA TCCTGTCCGGCTATTGCGGCCAGATCTCGCTCGGGCACGCGCTGTATTTTGGCCTCGGCGCCTATACGACCGCGATCCTG TTCACCAAGTTCGGCGTGCTGCCATGGTTCGGCATGCTCGCTGGCGGCCTGATCTCCGCTGTGATCGCGATGGCGCTCGG CTATCCCTGCTTCCGGCTCGGCGGCCATTACTTCGTGATCGCCACCATCGTCATCGCCGAGATCACGCTGCTCCTGTTCC AGAACTGGGACTTCGCAGGGGCCGCGCTCGGCATCGACATTCCGGTGCGGCGCGACTCCTGGCTGACGTTCCAGTTCACC CGCTCGAAGCTGCCATACTTCTACTTCGCGCTCGTGCTGGCCTGCGTCGCCTGGTTCGTCACCTGGTGGCTGGAGGATTC CAAATGGGGCTATTGGTGGCGCGCGGTGAAGGACAATCCGCTCGCGGCCGAGAGCCTCGGTGTCGACGTGTTCAATTCCA AGATGGGCGCGGCTGCCGTGTCCGCCTTCCTGGTCGCGATCGGCGGCAGCTTCTATGCGCAGTTCGTCAGCTACATCGAT CCCGAGAGCGTGATGGGCTTCCAGTTCTCGCTGCTGATGGCGTTGCCGGCCGTGCTCGGCGGCATCGGCACCCTCTGGGG CCCGATGCTCGGCGCGGTCATCCTGATCCCGCTCACCGAGCTGACCCGTTCTTACATCGGTGGCTCCGGCCGCGGCGTCG ACCTGATCGTCTATGGCGGCCTGATCATCGCGATCTCGCTGGCGCGGCCGCAGGGCCTGGTCAGCCTGTTCTCCCGCAAG CCGAAGACGGCGGCGCAGCCGGCGCGAGAGGCGGTGGCGTCATGA
Upstream 100 bases:
>100_bases CGACGCTGATCCTGCCGGCATCGCTCAAGACGGTCGGCATCTACGCGGTCTATCTCCTCGTCGTCTTCATCCGCCCGCGT GGCCTGTTCGGATCGATCTG
Downstream 100 bases:
>100_bases CCGCATTGTTGGAAACCCGCAACATCACCCAGCGCTTCTCGGGCCTGACCGCGAACTCCGACGTCTCGATCTCGGTCGGC CGCGGCGAGATCGTCGGCCT
Product: putative ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein M [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MDKAFVQRRRRDLILAAFLAAMAAAVPFFVKDVYVQNIMVLTLMYAALSQSWNILSGYCGQISLGHALYFGLGAYTTAIL FTKFGVLPWFGMLAGGLISAVIAMALGYPCFRLGGHYFVIATIVIAEITLLLFQNWDFAGAALGIDIPVRRDSWLTFQFT RSKLPYFYFALVLACVAWFVTWWLEDSKWGYWWRAVKDNPLAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYID PESVMGFQFSLLMALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGVDLIVYGGLIIAISLARPQGLVSLFSRK PKTAAQPAREAVAS
Sequences:
>Translated_334_residues MDKAFVQRRRRDLILAAFLAAMAAAVPFFVKDVYVQNIMVLTLMYAALSQSWNILSGYCGQISLGHALYFGLGAYTTAIL FTKFGVLPWFGMLAGGLISAVIAMALGYPCFRLGGHYFVIATIVIAEITLLLFQNWDFAGAALGIDIPVRRDSWLTFQFT RSKLPYFYFALVLACVAWFVTWWLEDSKWGYWWRAVKDNPLAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYID PESVMGFQFSLLMALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGVDLIVYGGLIIAISLARPQGLVSLFSRK PKTAAQPAREAVAS >Mature_334_residues MDKAFVQRRRRDLILAAFLAAMAAAVPFFVKDVYVQNIMVLTLMYAALSQSWNILSGYCGQISLGHALYFGLGAYTTAIL FTKFGVLPWFGMLAGGLISAVIAMALGYPCFRLGGHYFVIATIVIAEITLLLFQNWDFAGAALGIDIPVRRDSWLTFQFT RSKLPYFYFALVLACVAWFVTWWLEDSKWGYWWRAVKDNPLAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYID PESVMGFQFSLLMALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGVDLIVYGGLIIAISLARPQGLVSLFSRK PKTAAQPAREAVAS
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=325, Percent_Identity=28, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 36402; Mature: 36402
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKAFVQRRRRDLILAAFLAAMAAAVPFFVKDVYVQNIMVLTLMYAALSQSWNILSGYCG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC QISLGHALYFGLGAYTTAILFTKFGVLPWFGMLAGGLISAVIAMALGYPCFRLGGHYFVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH ATIVIAEITLLLFQNWDFAGAALGIDIPVRRDSWLTFQFTRSKLPYFYFALVLACVAWFV HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH TWWLEDSKWGYWWRAVKDNPLAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYID HHHHCCCCCCEEEEEECCCCCCHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC PESVMGFQFSLLMALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGVDLIVYGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH LIIAISLARPQGLVSLFSRKPKTAAQPAREAVAS HHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MDKAFVQRRRRDLILAAFLAAMAAAVPFFVKDVYVQNIMVLTLMYAALSQSWNILSGYCG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC QISLGHALYFGLGAYTTAILFTKFGVLPWFGMLAGGLISAVIAMALGYPCFRLGGHYFVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH ATIVIAEITLLLFQNWDFAGAALGIDIPVRRDSWLTFQFTRSKLPYFYFALVLACVAWFV HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH TWWLEDSKWGYWWRAVKDNPLAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYID HHHHCCCCCCEEEEEECCCCCCHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC PESVMGFQFSLLMALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGVDLIVYGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH LIIAISLARPQGLVSLFSRKPKTAAQPAREAVAS HHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2195019; 8041620; 9278503 [H]