Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is livH [H]
Identifier: 146339549
GI number: 146339549
Start: 2714829
End: 2715662
Strand: Direct
Name: livH [H]
Synonym: BRADO2540
Alternate gene names: 146339549
Gene position: 2714829-2715662 (Clockwise)
Preceding gene: 146339548
Following gene: 146339550
Centisome position: 36.41
GC content: 64.87
Gene sequence:
>834_bases ATGGGCCTGCTCTACGGCCTGATTGCCGTAGGGCTGGCGCTCATCTTCGGCCTGATGGACGTCGTGAACTTCGCCCATGG CGAGTTCCTGATGATCGCGATGTATGCGACCTTCTTCCTATTCGCCTATTTTGCGCTCGATCCGCTGCTGTCGGCGCCGA TCGTCGCGGCCGGATTGTTCGTCTTCGGCGCGGTGGTCTATTTGCTGATTGTCAGATTTGCCGTCCGCGCCAAGGCCAAT ACCGGCATGGTGCAGATCTTCTCCACCTTCGGCCTCGCCGTGCTGATGCGCGGCGTCGCGCAGTACTTCTTCACCCCCGA CTATCGCAGCATTCCGCACTCCTGGCTCGGCGGCAAGACGATCTCGATCGCCGGCATCTATCTGCCGCAGCCGCAGCTGG TCGGCGCGCTGATCGCGATCGCCGCTTTTGCCGGCCTGTACTTCTTCATCCACCGCACCGATTTCGGCCGCGCGCTGGAG GCGACGCGCGAGGACGCTGGGGCGGTGGCGCTGGTCGGCATCGACAAGAACAAGGTGTTCGCGCTCGGCTGGGGCCTGGG CGCGGCGCTGGTCGGCCTTGCCGGCGCGGTCATGGCGATCTTCTTCTACGTCTTCCCCGATGTCGGCGCGTCGTTCGCGA CCATCGCCTATGTGACGGTGGCGCTCGGCGGCTTCGGCAGCGTGTTCGGCGCCTTCGCCGGCGGCATCGTGGTCGGCCTC GTCGAGGCCATCACGACGCTGATCCTGCCGGCATCGCTCAAGACGGTCGGCATCTACGCGGTCTATCTCCTCGTCGTCTT CATCCGCCCGCGTGGCCTGTTCGGATCGATCTGA
Upstream 100 bases:
>100_bases TCCTGGCGTTCGCCAGGACGACACCCCGAGTCACATCGAGAGTGGGGCAAGATCTGTGACAGCAGAAACAATCATCCAAA GTCTCGCCAGCGGCCTGTTG
Downstream 100 bases:
>100_bases TGGACAAGGCATTCGTTCAACGCCGCCGGCGTGATCTCATCCTCGCCGCATTCCTCGCCGCGATGGCCGCGGCCGTGCCG TTCTTCGTCAAGGACGTCTA
Product: putative ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein H [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGLLYGLIAVGLALIFGLMDVVNFAHGEFLMIAMYATFFLFAYFALDPLLSAPIVAAGLFVFGAVVYLLIVRFAVRAKAN TGMVQIFSTFGLAVLMRGVAQYFFTPDYRSIPHSWLGGKTISIAGIYLPQPQLVGALIAIAAFAGLYFFIHRTDFGRALE ATREDAGAVALVGIDKNKVFALGWGLGAALVGLAGAVMAIFFYVFPDVGASFATIAYVTVALGGFGSVFGAFAGGIVVGL VEAITTLILPASLKTVGIYAVYLLVVFIRPRGLFGSI
Sequences:
>Translated_277_residues MGLLYGLIAVGLALIFGLMDVVNFAHGEFLMIAMYATFFLFAYFALDPLLSAPIVAAGLFVFGAVVYLLIVRFAVRAKAN TGMVQIFSTFGLAVLMRGVAQYFFTPDYRSIPHSWLGGKTISIAGIYLPQPQLVGALIAIAAFAGLYFFIHRTDFGRALE ATREDAGAVALVGIDKNKVFALGWGLGAALVGLAGAVMAIFFYVFPDVGASFATIAYVTVALGGFGSVFGAFAGGIVVGL VEAITTLILPASLKTVGIYAVYLLVVFIRPRGLFGSI >Mature_276_residues GLLYGLIAVGLALIFGLMDVVNFAHGEFLMIAMYATFFLFAYFALDPLLSAPIVAAGLFVFGAVVYLLIVRFAVRAKANT GMVQIFSTFGLAVLMRGVAQYFFTPDYRSIPHSWLGGKTISIAGIYLPQPQLVGALIAIAAFAGLYFFIHRTDFGRALEA TREDAGAVALVGIDKNKVFALGWGLGAALVGLAGAVMAIFFYVFPDVGASFATIAYVTVALGGFGSVFGAFAGGIVVGLV EAITTLILPASLKTVGIYAVYLLVVFIRPRGLFGSI
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=286, Percent_Identity=29.020979020979, Blast_Score=95, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 29243; Mature: 29112
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLYGLIAVGLALIFGLMDVVNFAHGEFLMIAMYATFFLFAYFALDPLLSAPIVAAGLF CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGAVVYLLIVRFAVRAKANTGMVQIFSTFGLAVLMRGVAQYFFTPDYRSIPHSWLGGKT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHCCCCE ISIAGIYLPQPQLVGALIAIAAFAGLYFFIHRTDFGRALEATREDAGAVALVGIDKNKVF EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEE ALGWGLGAALVGLAGAVMAIFFYVFPDVGASFATIAYVTVALGGFGSVFGAFAGGIVVGL EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VEAITTLILPASLKTVGIYAVYLLVVFIRPRGLFGSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GLLYGLIAVGLALIFGLMDVVNFAHGEFLMIAMYATFFLFAYFALDPLLSAPIVAAGLF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGAVVYLLIVRFAVRAKANTGMVQIFSTFGLAVLMRGVAQYFFTPDYRSIPHSWLGGKT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHCCCCE ISIAGIYLPQPQLVGALIAIAAFAGLYFFIHRTDFGRALEATREDAGAVALVGIDKNKVF EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEE ALGWGLGAALVGLAGAVMAIFFYVFPDVGASFATIAYVTVALGGFGSVFGAFAGGIVVGL EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VEAITTLILPASLKTVGIYAVYLLVVFIRPRGLFGSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]