Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is sam [H]
Identifier: 146339489
GI number: 146339489
Start: 2641729
End: 2642682
Strand: Direct
Name: sam [H]
Synonym: BRADO2478
Alternate gene names: 146339489
Gene position: 2641729-2642682 (Clockwise)
Preceding gene: 146339488
Following gene: 146339490
Centisome position: 35.43
GC content: 66.88
Gene sequence:
>954_bases GTGCCGACGACACTTCAGGACAAGCCGAGTGCGGCGCGCAAGCGTGCGCCGGCGCGGGCCGACCGCCCGTTCCGCGGCAT CGCGCTGATCCTGCTGTCGACCGTGTTCCTCGGAACCTCGGACGTCACGGCGAAATATCTCTCCAAGACCTTGCCCTCCA TCGAGATCACCTGGATCCGCTTCGTGGTGTTCGCGCTGATCATGGTGCCCGCGATGATCCCGGGCTCGCCGCTGTTTGCG ATGCGCACCGAGCGCGTACCGCTGCATCTGCTGCGCGGCATCGCGCTGCTGGGCTCCTCGATCATGTTCATCTCCGGTTT ACGCTATCTGCCGATTGCAGAGGCCTCCGCCACCGGCTTCGTCGCGCCGCTGTTCGTGACCGCGCTGTCGATCATCTTCC TTCACGAGAAGGTCGGCCTGCGCCGCTGGATCGCGACCGCCGTCGGCCTGTTCGGCGTGCTGATCATCCTGCGCCCGGGC ACCGGCGCGTTCCATCTCGCCGCGCTGTTTCCGATCGCCTCGGCGTTTGCCTGGGCCTGCACCCTGATCATGACGCGCAT GATGAGCGGCCGCGAGCACGCCATCACCATCATGACCTATTCGTCGATCGCCGGCGTCTGCCTGCTGTCGGCGATGGTGC CGTTCGTCTGGACCACGCCGTCCTGGCAGGACATCGGCTTCGGCGTGCTGGTCGGCGTCGCCTCGACCATGGGGCAGTGG ATCGTCGTGCTCGCCTTCCGCTATGCCGACGCCTCGGTGCTGGCGCCGTTCTCCTACACTCAGCTGCTGTGGGTCAGCAT CCTCGGCTTCCTGGTGTTCGGCGAGTTGCCCGACGTCTGGACCATCGTCGGCGCCGCCTTCATCGTCTCCAGCGGCCTCT ACACCGCCCACCGCGAGCGCGTCCGCCGCTCGCAATTGCTGCAGGTCGCCGGCGAGAGCTCGCCGAATCCGTAG
Upstream 100 bases:
>100_bases GGCGTTTTGTCGCCTCTCACCGATTCGTTTCGCCTTCCAATTTCCGAGTTCGACCGTGACCCCGCCCCCGAGCGCGGCTG CCGCCGCGCGGCTTGACGAC
Downstream 100 bases:
>100_bases ACGCCTCTCCACACGGCCGTCATTCGGGGGCGAGGCCGTCAGGCCACGAACCCGGAATCTCGAGCTTGGTTTGCTCCCGC GTCTCATCTCGGGATTCCGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MPTTLQDKPSAARKRAPARADRPFRGIALILLSTVFLGTSDVTAKYLSKTLPSIEITWIRFVVFALIMVPAMIPGSPLFA MRTERVPLHLLRGIALLGSSIMFISGLRYLPIAEASATGFVAPLFVTALSIIFLHEKVGLRRWIATAVGLFGVLIILRPG TGAFHLAALFPIASAFAWACTLIMTRMMSGREHAITIMTYSSIAGVCLLSAMVPFVWTTPSWQDIGFGVLVGVASTMGQW IVVLAFRYADASVLAPFSYTQLLWVSILGFLVFGELPDVWTIVGAAFIVSSGLYTAHRERVRRSQLLQVAGESSPNP
Sequences:
>Translated_317_residues MPTTLQDKPSAARKRAPARADRPFRGIALILLSTVFLGTSDVTAKYLSKTLPSIEITWIRFVVFALIMVPAMIPGSPLFA MRTERVPLHLLRGIALLGSSIMFISGLRYLPIAEASATGFVAPLFVTALSIIFLHEKVGLRRWIATAVGLFGVLIILRPG TGAFHLAALFPIASAFAWACTLIMTRMMSGREHAITIMTYSSIAGVCLLSAMVPFVWTTPSWQDIGFGVLVGVASTMGQW IVVLAFRYADASVLAPFSYTQLLWVSILGFLVFGELPDVWTIVGAAFIVSSGLYTAHRERVRRSQLLQVAGESSPNP >Mature_316_residues PTTLQDKPSAARKRAPARADRPFRGIALILLSTVFLGTSDVTAKYLSKTLPSIEITWIRFVVFALIMVPAMIPGSPLFAM RTERVPLHLLRGIALLGSSIMFISGLRYLPIAEASATGFVAPLFVTALSIIFLHEKVGLRRWIATAVGLFGVLIILRPGT GAFHLAALFPIASAFAWACTLIMTRMMSGREHAITIMTYSSIAGVCLLSAMVPFVWTTPSWQDIGFGVLVGVASTMGQWI VVLAFRYADASVLAPFSYTQLLWVSILGFLVFGELPDVWTIVGAAFIVSSGLYTAHRERVRRSQLLQVAGESSPNP
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
Organism=Drosophila melanogaster, GI24645940, Length=299, Percent_Identity=27.0903010033445, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34444; Mature: 34313
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTLQDKPSAARKRAPARADRPFRGIALILLSTVFLGTSDVTAKYLSKTLPSIEITWIR CCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH FVVFALIMVPAMIPGSPLFAMRTERVPLHLLRGIALLGSSIMFISGLRYLPIAEASATGF HHHHHHHHHHHCCCCCCEEHHCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCH VAPLFVTALSIIFLHEKVGLRRWIATAVGLFGVLIILRPGTGAFHLAALFPIASAFAWAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TLIMTRMMSGREHAITIMTYSSIAGVCLLSAMVPFVWTTPSWQDIGFGVLVGVASTMGQW HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHH IVVLAFRYADASVLAPFSYTQLLWVSILGFLVFGELPDVWTIVGAAFIVSSGLYTAHRER HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH VRRSQLLQVAGESSPNP HHHHHHHHHHCCCCCCC >Mature Secondary Structure PTTLQDKPSAARKRAPARADRPFRGIALILLSTVFLGTSDVTAKYLSKTLPSIEITWIR CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH FVVFALIMVPAMIPGSPLFAMRTERVPLHLLRGIALLGSSIMFISGLRYLPIAEASATGF HHHHHHHHHHHCCCCCCEEHHCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCH VAPLFVTALSIIFLHEKVGLRRWIATAVGLFGVLIILRPGTGAFHLAALFPIASAFAWAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TLIMTRMMSGREHAITIMTYSSIAGVCLLSAMVPFVWTTPSWQDIGFGVLVGVASTMGQW HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHH IVVLAFRYADASVLAPFSYTQLLWVSILGFLVFGELPDVWTIVGAAFIVSSGLYTAHRER HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH VRRSQLLQVAGESSPNP HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA