Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yeaE [H]
Identifier: 146339488
GI number: 146339488
Start: 2640683
End: 2641531
Strand: Direct
Name: yeaE [H]
Synonym: BRADO2477
Alternate gene names: 146339488
Gene position: 2640683-2641531 (Clockwise)
Preceding gene: 146339487
Following gene: 146339489
Centisome position: 35.41
GC content: 66.67
Gene sequence:
>849_bases ATGAAGCACAAGACATTCGGAACCGGCGGCGCCGGCGTGTCCGTCATCGGGCAGGGCACCTGGTATCTCGACCACGCCGA CCGCAAGCGCGCCATCACGACGTTGCAGCGCGGCCTCGACCGCGGCATGACGCATATCGACACGGCGGAGATGTATGGCG ACGCCGAGCTCGTCATCGCCGACGCCATCACCGGCCGCCGCGACGAAGTGTTCCTGGTCTCGAAAGTGCTGCCCAGCAAC GCCTCGCGAAAGGGGACCATCACCGCCTGCGAGCGCTCGCTGAAGCGGCTGAGGACGGATCGCCTCGACTGCTATCTGCT GCATTGGCCTGGCTCGCATCCGCTCGAAGAGACGGTGGCTGCATTCGAGGAACTCAAAGCCGCCGGCAAGATCGCGTCCT GGGGCGTCAGCAATTTCGACGTCGACGATCTCGACGATCTCGACGAGCTGCTCGACGTCGCAGGCCGGGGCAAGATCGCC TGCAATCAGGTGCTCTATCATCTGCAGGAGCGTGCCATCGAGCACGCGGTCATTCCATGGTGCGGCCAGCATGGCGTCGC CGTGGTCGCCTATTCGCCATTCGGCCATGACGACTTCCCGGAGCGCCGCAGCACGGGCGGCGAGGTGCTGCAGCGCATCG CCGAGCAGCATCACGCGACGCCGCACCAGATCGCGCTCGCCTTCCTGACCCGCGCCTCGTCGCTGCTCGCGATCCCCAAG GCGTCGCGGCCCGAACATGCCGAGGAGAATGCCGCGGCCGGCGAGATCGAGCTGACCGCCGCCGACATTGCAGCGATCGA TCGTGCTTTCCCGCGCGGTCCGAAGCCGCGCGGTCTGCCGATGCTGTAG
Upstream 100 bases:
>100_bases CAGAGTCCCGCGACGGCTCTGGATTGCTTTGTCGCTTCGCTTCTCGCAATGACGGCAGTGGCCGATCGACGCGCCGCGCC ATATCCTCTATGATTGTCCT
Downstream 100 bases:
>100_bases TGCAGCATCACGGAGTATTACGGATGTTTGCTACTCCGGCGCGTAGCCAGCGCATAGATGCTGCCCGCTTTCGACGGGTT GTCGCGGCGCCGTGATTGGC
Product: putative aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKHKTFGTGGAGVSVIGQGTWYLDHADRKRAITTLQRGLDRGMTHIDTAEMYGDAELVIADAITGRRDEVFLVSKVLPSN ASRKGTITACERSLKRLRTDRLDCYLLHWPGSHPLEETVAAFEELKAAGKIASWGVSNFDVDDLDDLDELLDVAGRGKIA CNQVLYHLQERAIEHAVIPWCGQHGVAVVAYSPFGHDDFPERRSTGGEVLQRIAEQHHATPHQIALAFLTRASSLLAIPK ASRPEHAEENAAAGEIELTAADIAAIDRAFPRGPKPRGLPML
Sequences:
>Translated_282_residues MKHKTFGTGGAGVSVIGQGTWYLDHADRKRAITTLQRGLDRGMTHIDTAEMYGDAELVIADAITGRRDEVFLVSKVLPSN ASRKGTITACERSLKRLRTDRLDCYLLHWPGSHPLEETVAAFEELKAAGKIASWGVSNFDVDDLDDLDELLDVAGRGKIA CNQVLYHLQERAIEHAVIPWCGQHGVAVVAYSPFGHDDFPERRSTGGEVLQRIAEQHHATPHQIALAFLTRASSLLAIPK ASRPEHAEENAAAGEIELTAADIAAIDRAFPRGPKPRGLPML >Mature_282_residues MKHKTFGTGGAGVSVIGQGTWYLDHADRKRAITTLQRGLDRGMTHIDTAEMYGDAELVIADAITGRRDEVFLVSKVLPSN ASRKGTITACERSLKRLRTDRLDCYLLHWPGSHPLEETVAAFEELKAAGKIASWGVSNFDVDDLDDLDELLDVAGRGKIA CNQVLYHLQERAIEHAVIPWCGQHGVAVVAYSPFGHDDFPERRSTGGEVLQRIAEQHHATPHQIALAFLTRASSLLAIPK ASRPEHAEENAAAGEIELTAADIAAIDRAFPRGPKPRGLPML
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI310109922, Length=276, Percent_Identity=32.6086956521739, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI223468663, Length=289, Percent_Identity=28.3737024221453, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI24497585, Length=293, Percent_Identity=29.6928327645051, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI45446745, Length=296, Percent_Identity=31.0810810810811, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI4503285, Length=296, Percent_Identity=31.0810810810811, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI310109920, Length=296, Percent_Identity=31.0810810810811, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI5453543, Length=295, Percent_Identity=29.8305084745763, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI291291012, Length=261, Percent_Identity=29.1187739463602, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI4502049, Length=301, Percent_Identity=28.9036544850498, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI24497583, Length=293, Percent_Identity=30.0341296928328, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI24497577, Length=291, Percent_Identity=26.4604810996564, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI5174391, Length=291, Percent_Identity=26.4604810996564, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI5174695, Length=300, Percent_Identity=26, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI300116273, Length=283, Percent_Identity=26.5017667844523, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI1788081, Length=275, Percent_Identity=45.8181818181818, Blast_Score=243, Evalue=1e-65, Organism=Escherichia coli, GI1786400, Length=259, Percent_Identity=31.2741312741313, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788070, Length=319, Percent_Identity=27.8996865203762, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87082198, Length=275, Percent_Identity=30.5454545454545, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87081735, Length=321, Percent_Identity=27.4143302180685, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787674, Length=294, Percent_Identity=28.2312925170068, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1789199, Length=326, Percent_Identity=28.2208588957055, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789375, Length=328, Percent_Identity=23.1707317073171, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17552492, Length=281, Percent_Identity=27.0462633451957, Blast_Score=104, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17537077, Length=292, Percent_Identity=29.4520547945205, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17537075, Length=307, Percent_Identity=29.3159609120521, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17564128, Length=296, Percent_Identity=27.7027027027027, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17561300, Length=265, Percent_Identity=26.7924528301887, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17561298, Length=285, Percent_Identity=27.719298245614, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17566692, Length=293, Percent_Identity=24.9146757679181, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17550248, Length=294, Percent_Identity=25.8503401360544, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71998625, Length=238, Percent_Identity=27.3109243697479, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538386, Length=282, Percent_Identity=23.4042553191489, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6324694, Length=290, Percent_Identity=28.6206896551724, Blast_Score=96, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6320079, Length=290, Percent_Identity=26.8965517241379, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24644950, Length=306, Percent_Identity=28.7581699346405, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24657054, Length=292, Percent_Identity=27.7397260273973, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24662789, Length=298, Percent_Identity=27.8523489932886, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI21356425, Length=306, Percent_Identity=25.4901960784314, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24663317, Length=290, Percent_Identity=25.5172413793103, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI20129731, Length=291, Percent_Identity=26.8041237113402, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24662781, Length=284, Percent_Identity=25.3521126760563, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30795; Mature: 30795
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKTFGTGGAGVSVIGQGTWYLDHADRKRAITTLQRGLDRGMTHIDTAEMYGDAELVIA CCCCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEE DAITGRRDEVFLVSKVLPSNASRKGTITACERSLKRLRTDRLDCYLLHWPGSHPLEETVA ECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH AFEELKAAGKIASWGVSNFDVDDLDDLDELLDVAGRGKIACNQVLYHLQERAIEHAVIPW HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC CGQHGVAVVAYSPFGHDDFPERRSTGGEVLQRIAEQHHATPHQIALAFLTRASSLLAIPK CCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCC ASRPEHAEENAAAGEIELTAADIAAIDRAFPRGPKPRGLPML CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKHKTFGTGGAGVSVIGQGTWYLDHADRKRAITTLQRGLDRGMTHIDTAEMYGDAELVIA CCCCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEE DAITGRRDEVFLVSKVLPSNASRKGTITACERSLKRLRTDRLDCYLLHWPGSHPLEETVA ECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH AFEELKAAGKIASWGVSNFDVDDLDDLDELLDVAGRGKIACNQVLYHLQERAIEHAVIPW HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC CGQHGVAVVAYSPFGHDDFPERRSTGGEVLQRIAEQHHATPHQIALAFLTRASSLLAIPK CCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCC ASRPEHAEENAAAGEIELTAADIAAIDRAFPRGPKPRGLPML CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]