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The map label for this gene is ccdA [H]

Identifier: 146339478

GI number: 146339478

Start: 2627864

End: 2628598

Strand: Direct

Name: ccdA [H]

Synonym: BRADO2467

Alternate gene names: 146339478

Gene position: 2627864-2628598 (Clockwise)

Preceding gene: 146339477

Following gene: 146339481

Centisome position: 35.24

GC content: 67.35

Gene sequence:

>735_bases
ATGATTCAGAACGTATCGATTCCGGCGGCGTTCATCGCCGGCCTGGTGAGCTTCCTGTCGCCCTGTGTCCTGCCGCTGGT
GCCGCCCTATCTGGTCTATCTCACCGGCGCCACGATCGAGCACATCGAGAGCCAGGAGCCGGCGGCGGCCTCGCGGCGGG
CGGTGATGATCTCGGCGGCGCTGTTCGTGCTGGGCTTCTCCACCGTGTTCGTGATGCTCGGCGCCAGCGCCTCGCTCATC
GGCGGCCTCATTCGCGCCTGGTCCGAGCAGCTCTCGATCCTCGCCGGCGTCGTGATCATCGTGATGGGCCTGCATTTCCT
CGGGCTGACCCGGATTGCGTTCCTGATGCGCGAGGGCCGGCTGCCGATCCCGAAGCCGGTCGGCCTGTGGGGCGCCTATG
TCATGGGCCTCGCATTCGCCTTCGGCTGGACGCCCTGCATCGGGCCGATCCTGGCGGCCATTCTGTCGATTGCCGCCGCA
GAGGCCACGGTGGCGAAGGGCGCCGGGCTGCTGGCGATCTATTCGGCCGGGCTCGGCATCCCATTCCTGGTCGCGGCCTT
CATGATCGAGCAGTTCTCGGCCCTGTTCATGCGGATGCGCGGCCACCTCGTGAACGTCGAGCGGGCGATGGGCGTGCTGA
TGATCGTCACCGGCATAGGCTTCCTCACCGGCGCCGTCTCGACCTTCAGCATCTGGCTGCTCGAGACCTTCCCGGCGCTG
CAGCGGTTCGGCTGA

Upstream 100 bases:

>100_bases
CGTAACTTCGGCGCCTCTGTTGCGTAATGCTCGCATCGGCGGCATGAAGCAGCATGCCTGGGCGTCAGGACGCCGCCCGA
GGGGTTAGCGTAGGACACGC

Downstream 100 bases:

>100_bases
ACGCGCCGATCAGTCTTCGAGCTTGCAGGTGATGGTGTAGACCACGCCGGGCGGCAGGAAGTCGACCGTCGCCTCGCCGC
CGAGCTGGTCGCGTGCGCTG

Product: putative transmembrane cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MIQNVSIPAAFIAGLVSFLSPCVLPLVPPYLVYLTGATIEHIESQEPAAASRRAVMISAALFVLGFSTVFVMLGASASLI
GGLIRAWSEQLSILAGVVIIVMGLHFLGLTRIAFLMREGRLPIPKPVGLWGAYVMGLAFAFGWTPCIGPILAAILSIAAA
EATVAKGAGLLAIYSAGLGIPFLVAAFMIEQFSALFMRMRGHLVNVERAMGVLMIVTGIGFLTGAVSTFSIWLLETFPAL
QRFG

Sequences:

>Translated_244_residues
MIQNVSIPAAFIAGLVSFLSPCVLPLVPPYLVYLTGATIEHIESQEPAAASRRAVMISAALFVLGFSTVFVMLGASASLI
GGLIRAWSEQLSILAGVVIIVMGLHFLGLTRIAFLMREGRLPIPKPVGLWGAYVMGLAFAFGWTPCIGPILAAILSIAAA
EATVAKGAGLLAIYSAGLGIPFLVAAFMIEQFSALFMRMRGHLVNVERAMGVLMIVTGIGFLTGAVSTFSIWLLETFPAL
QRFG
>Mature_244_residues
MIQNVSIPAAFIAGLVSFLSPCVLPLVPPYLVYLTGATIEHIESQEPAAASRRAVMISAALFVLGFSTVFVMLGASASLI
GGLIRAWSEQLSILAGVVIIVMGLHFLGLTRIAFLMREGRLPIPKPVGLWGAYVMGLAFAFGWTPCIGPILAAILSIAAA
EATVAKGAGLLAIYSAGLGIPFLVAAFMIEQFSALFMRMRGHLVNVERAMGVLMIVTGIGFLTGAVSTFSIWLLETFPAL
QRFG

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 25756; Mature: 25756

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure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HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]