Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is chqB [H]
Identifier: 146339481
GI number: 146339481
Start: 2631769
End: 2632686
Strand: Direct
Name: chqB [H]
Synonym: BRADO2470
Alternate gene names: 146339481
Gene position: 2631769-2632686 (Clockwise)
Preceding gene: 146339478
Following gene: 146339482
Centisome position: 35.29
GC content: 64.92
Gene sequence:
>918_bases ATGACACAATTCAACGAAGCCGAACTGACGGACACCGTCGTCGCCAGCTTCGACGCCACGCCGGACGCGCGCGCAAAGGT CCTGCTGCAGGAACTCGTCAAATCGCTGCACGACTATGTGCGCCGGACGAATCTGACATTCGACGAATGGACGGCTGCGA TCGATTTCCTGACCCGCACCGGCCAGACCTGCACCGCGAGCCGGCAGGAGTTCATCCTGTTGTCGGACGTGCTCGGCGTC TCCATGCTGGTGGACGCCATCAACCACCGCGACAGGGCAGGGGCGACCGAGACCACGGTGCTCGGCCCGTTCTATGTCGG CGAGCACAAGGTGACCGCCCACGGCACCGATATCTCGGCGGACCTCAAGGGGGAAAAGATGTTCGTGCAGGCGCGGGTGA CGGACCTCGCGGGCGCGCCGCTGGCGGGTGCCGCAGTCGACGTCTGGCATGCGGATGACGAGGGCCTCTATGATTCACAG AAATCCGATTATGCCTCGGACGGTCCCTCGTCGCGGGCGCGCTTCATCGCCGATGCCGACGGACGCTTCTTCTTCCGCAC CATCCTGCCTTGCAGCTATCCGATTCCGACTGACGGCCCGGTGGGGCAGATGATTCTGAGCACCAAGCGGCATCCGATGC GCCCGGCGCATGTGCATTTCCTGGTCGACGCCGAAGGCCACGAGCCGCTGATCACGCATGTGTTCATCGGCGGCGACGCC CATCTCGACAGCGACGTGGTGTTCGGCGTGAAGGATGAGTTGATCGCCGAGGTCGCGCAGCGCACCGATCCGGTAATGCC GGACGGCAAGCTCGCAGCAGGGCCCTGGCACCTGATGACCTATGAATTCCGCATGAAGCCGGGCGCGGGCGTCGCACCCA AGCCGATGCTCGCCAAGCCGGCCGGGGCAGCGGAGTAG
Upstream 100 bases:
>100_bases ATGCGCACGGCCATTTGTGCGGGTGATAGCCGAAAAACGCCCCACTTCCAATGGCAGGCCAGGAATGCGTCGTGTAGCCT TCAGCCCGGGAGGATCGGCC
Downstream 100 bases:
>100_bases GCCCGTTTAACGCGCCCACTTCTTGTGCAACGCACAGGAAGTGGGCGAATCGCAAATTTTGCGTGCGGCCGTGGGCCTGC GAAGCTCACGGTCGAATTTC
Product: putative catechol 1,2-dioxygenase
Products: NA
Alternate protein names: 1,2-HQD [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTQFNEAELTDTVVASFDATPDARAKVLLQELVKSLHDYVRRTNLTFDEWTAAIDFLTRTGQTCTASRQEFILLSDVLGV SMLVDAINHRDRAGATETTVLGPFYVGEHKVTAHGTDISADLKGEKMFVQARVTDLAGAPLAGAAVDVWHADDEGLYDSQ KSDYASDGPSSRARFIADADGRFFFRTILPCSYPIPTDGPVGQMILSTKRHPMRPAHVHFLVDAEGHEPLITHVFIGGDA HLDSDVVFGVKDELIAEVAQRTDPVMPDGKLAAGPWHLMTYEFRMKPGAGVAPKPMLAKPAGAAE
Sequences:
>Translated_305_residues MTQFNEAELTDTVVASFDATPDARAKVLLQELVKSLHDYVRRTNLTFDEWTAAIDFLTRTGQTCTASRQEFILLSDVLGV SMLVDAINHRDRAGATETTVLGPFYVGEHKVTAHGTDISADLKGEKMFVQARVTDLAGAPLAGAAVDVWHADDEGLYDSQ KSDYASDGPSSRARFIADADGRFFFRTILPCSYPIPTDGPVGQMILSTKRHPMRPAHVHFLVDAEGHEPLITHVFIGGDA HLDSDVVFGVKDELIAEVAQRTDPVMPDGKLAAGPWHLMTYEFRMKPGAGVAPKPMLAKPAGAAE >Mature_304_residues TQFNEAELTDTVVASFDATPDARAKVLLQELVKSLHDYVRRTNLTFDEWTAAIDFLTRTGQTCTASRQEFILLSDVLGVS MLVDAINHRDRAGATETTVLGPFYVGEHKVTAHGTDISADLKGEKMFVQARVTDLAGAPLAGAAVDVWHADDEGLYDSQK SDYASDGPSSRARFIADADGRFFFRTILPCSYPIPTDGPVGQMILSTKRHPMRPAHVHFLVDAEGHEPLITHVFIGGDAH LDSDVVFGVKDELIAEVAQRTDPVMPDGKLAAGPWHLMTYEFRMKPGAGVAPKPMLAKPAGAAE
Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.37 [H]
Molecular weight: Translated: 33147; Mature: 33016
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFNEAELTDTVVASFDATPDARAKVLLQELVKSLHDYVRRTNLTFDEWTAAIDFLTRT CCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC GQTCTASRQEFILLSDVLGVSMLVDAINHRDRAGATETTVLGPFYVGEHKVTAHGTDISA CCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEECCEEEEECCCCCCC DLKGEKMFVQARVTDLAGAPLAGAAVDVWHADDEGLYDSQKSDYASDGPSSRARFIADAD CCCCCEEEEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC GRFFFRTILPCSYPIPTDGPVGQMILSTKRHPMRPAHVHFLVDAEGHEPLITHVFIGGDA CCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC HLDSDVVFGVKDELIAEVAQRTDPVMPDGKLAAGPWHLMTYEFRMKPGAGVAPKPMLAKP CCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC AGAAE CCCCC >Mature Secondary Structure TQFNEAELTDTVVASFDATPDARAKVLLQELVKSLHDYVRRTNLTFDEWTAAIDFLTRT CCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC GQTCTASRQEFILLSDVLGVSMLVDAINHRDRAGATETTVLGPFYVGEHKVTAHGTDISA CCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEECCEEEEECCCCCCC DLKGEKMFVQARVTDLAGAPLAGAAVDVWHADDEGLYDSQKSDYASDGPSSRARFIADAD CCCCCEEEEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC GRFFFRTILPCSYPIPTDGPVGQMILSTKRHPMRPAHVHFLVDAEGHEPLITHVFIGGDA CCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC HLDSDVVFGVKDELIAEVAQRTDPVMPDGKLAAGPWHLMTYEFRMKPGAGVAPKPMLAKP CCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC AGAAE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141483 [H]