Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is adh [H]
Identifier: 146339469
GI number: 146339469
Start: 2617472
End: 2618563
Strand: Direct
Name: adh [H]
Synonym: BRADO2457
Alternate gene names: 146339469
Gene position: 2617472-2618563 (Clockwise)
Preceding gene: 146339468
Following gene: 146339470
Centisome position: 35.1
GC content: 66.58
Gene sequence:
>1092_bases GTGCCGGACCACGGGAGTGAAAGCATGAAGAGCTTCAAGGTCACCGATTTCAACGCGCCGCTGACCGAGGTCGACGAGCC GACGCCGCAGCCGTTTGGCAAGCAGGTGCTGATCAAGGTGAAGGCGGCCGGCGTCTGCCATAGCGACCTGCACATCTGGG AAGGTGGCTATGACCTTGGCCACGGCCGCAAGCCGCTGTCCTTGAAGGATCGCGGCGTCTCGCTGCCGCGGACCATGGGA CACGAGAGCGCCGGTGAGATCGTGGCGTTCGGGCCCGAGGTCACCGAAGCCGAGAAAGGGGGCTTGAAGGTTGGCGACGT CGCGCTGGTCTATCCCTGGATCGGCTGCGGCAAATGTGCCACTTGCCTCGCCGGCGACGAGAACATGTGTCTGAAACCGG CCTCGCTCGGCGTCTATTGCGACGGCGGTTATGCCGATCACATGACGGTGCCGCATCCGCGCCACCTGATCGATCTCAAG GGTCTCGATCCCGTGACGACCGCGCCTTATGCCTGCTCGGGCGTGACGACCTACAGCGCGCTTAAAAAGGTCGAGACGGA TTTTGATACGCCGATCGTCATCTTCGGCGCCGGCGGTCTCGGCCTGATGGCGCTGTCCTTGCTCAAGGCGATGGGCGGCA AGGGCGCCATCGTCGTCGACATCGACGCCCGCAAGCGCGAGGCCGCGCTCGCGGCAGGCGCGCTGGCCGCCGTCGACGGC AAGGCGCCGGATGCGCTGGAGCAGTTGAACAAGGCGGCGGGCGAGCCGATCCGGGCGGTGATCGACCTGGTCGGCAATGC CGCCACGGCGCAGCTCGGCTTCGACTGCCTGACCAAGGGCGGCAAGCTCGTCATCGTCGGCCTGTTCGGCGGCGGCGCGC CCTGGGCGCTGCCGCTCATTCCGATCAAGGCGGTGACGATCCAGGGCAGCTATGTCGGCAATCTGCGCGAGACCAAGGAA CTGCTCGACCTCGTCCGCGCCAAGAACATCGCGCCGATCCCGGTGACCCCGATGCCGCTCGCGAGGGCCAATGATGCCCT GCACGAGCTGCAAAAGGGCCAGCTGGTCGGCCGCGCGGTGCTGACGCCGTAG
Upstream 100 bases:
>100_bases TCCGCCGGACGCGCCATGCCGGGAGGAGATGTCGAGGCCCGCTTGCCCCAGCGCAAGCCGTCGCCCGTCGGTCCCGTCGT GACGCCGTCCGGTCCTGCTA
Downstream 100 bases:
>100_bases CCGTTGCTCTCACATTCGTCATTGCGAGGAGCGAATCGACGAAGCAATCCAGAGTCTTAACCTTGGCCCTGGATTGCTTC GCTTCGCTCGCAATGACGGC
Product: putative NAD-dependent alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MPDHGSESMKSFKVTDFNAPLTEVDEPTPQPFGKQVLIKVKAAGVCHSDLHIWEGGYDLGHGRKPLSLKDRGVSLPRTMG HESAGEIVAFGPEVTEAEKGGLKVGDVALVYPWIGCGKCATCLAGDENMCLKPASLGVYCDGGYADHMTVPHPRHLIDLK GLDPVTTAPYACSGVTTYSALKKVETDFDTPIVIFGAGGLGLMALSLLKAMGGKGAIVVDIDARKREAALAAGALAAVDG KAPDALEQLNKAAGEPIRAVIDLVGNAATAQLGFDCLTKGGKLVIVGLFGGGAPWALPLIPIKAVTIQGSYVGNLRETKE LLDLVRAKNIAPIPVTPMPLARANDALHELQKGQLVGRAVLTP
Sequences:
>Translated_363_residues MPDHGSESMKSFKVTDFNAPLTEVDEPTPQPFGKQVLIKVKAAGVCHSDLHIWEGGYDLGHGRKPLSLKDRGVSLPRTMG HESAGEIVAFGPEVTEAEKGGLKVGDVALVYPWIGCGKCATCLAGDENMCLKPASLGVYCDGGYADHMTVPHPRHLIDLK GLDPVTTAPYACSGVTTYSALKKVETDFDTPIVIFGAGGLGLMALSLLKAMGGKGAIVVDIDARKREAALAAGALAAVDG KAPDALEQLNKAAGEPIRAVIDLVGNAATAQLGFDCLTKGGKLVIVGLFGGGAPWALPLIPIKAVTIQGSYVGNLRETKE LLDLVRAKNIAPIPVTPMPLARANDALHELQKGQLVGRAVLTP >Mature_362_residues PDHGSESMKSFKVTDFNAPLTEVDEPTPQPFGKQVLIKVKAAGVCHSDLHIWEGGYDLGHGRKPLSLKDRGVSLPRTMGH ESAGEIVAFGPEVTEAEKGGLKVGDVALVYPWIGCGKCATCLAGDENMCLKPASLGVYCDGGYADHMTVPHPRHLIDLKG LDPVTTAPYACSGVTTYSALKKVETDFDTPIVIFGAGGLGLMALSLLKAMGGKGAIVVDIDARKREAALAAGALAAVDGK APDALEQLNKAAGEPIRAVIDLVGNAATAQLGFDCLTKGGKLVIVGLFGGGAPWALPLIPIKAVTIQGSYVGNLRETKEL LDLVRAKNIAPIPVTPMPLARANDALHELQKGQLVGRAVLTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=348, Percent_Identity=25.2873563218391, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI4501933, Length=379, Percent_Identity=24.802110817942, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI34577061, Length=379, Percent_Identity=24.802110817942, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI226510992, Length=286, Percent_Identity=31.1188811188811, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI87081918, Length=328, Percent_Identity=29.2682926829268, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87082401, Length=357, Percent_Identity=28.0112044817927, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790045, Length=346, Percent_Identity=22.5433526011561, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787863, Length=289, Percent_Identity=29.0657439446367, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87082125, Length=277, Percent_Identity=29.6028880866426, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788073, Length=289, Percent_Identity=28.3737024221453, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786518, Length=363, Percent_Identity=28.6501377410468, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788407, Length=342, Percent_Identity=23.0994152046784, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1788075, Length=344, Percent_Identity=24.4186046511628, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1790718, Length=344, Percent_Identity=21.2209302325581, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988145, Length=360, Percent_Identity=28.0555555555556, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17562582, Length=359, Percent_Identity=27.5766016713092, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562584, Length=350, Percent_Identity=25.7142857142857, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17562876, Length=349, Percent_Identity=25.214899713467, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562878, Length=243, Percent_Identity=28.3950617283951, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323961, Length=361, Percent_Identity=31.3019390581717, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324486, Length=360, Percent_Identity=31.1111111111111, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323729, Length=344, Percent_Identity=31.3953488372093, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6319621, Length=360, Percent_Identity=29.1666666666667, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323980, Length=351, Percent_Identity=29.0598290598291, Blast_Score=96, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6320033, Length=381, Percent_Identity=24.1469816272966, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319949, Length=353, Percent_Identity=26.628895184136, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319258, Length=319, Percent_Identity=25.705329153605, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319257, Length=318, Percent_Identity=25.1572327044025, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI17137530, Length=266, Percent_Identity=28.9473684210526, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI17737897, Length=266, Percent_Identity=26.6917293233083, Blast_Score=79, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 37848; Mature: 37717
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDHGSESMKSFKVTDFNAPLTEVDEPTPQPFGKQVLIKVKAAGVCHSDLHIWEGGYDLG CCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCCEEECCCCCCC HGRKPLSLKDRGVSLPRTMGHESAGEIVAFGPEVTEAEKGGLKVGDVALVYPWIGCGKCA CCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCCEEECCEEEEECCCCCCCHH TCLAGDENMCLKPASLGVYCDGGYADHMTVPHPRHLIDLKGLDPVTTAPYACSGVTTYSA HHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH LKKVETDFDTPIVIFGAGGLGLMALSLLKAMGGKGAIVVDIDARKREAALAAGALAAVDG HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEECC KAPDALEQLNKAAGEPIRAVIDLVGNAATAQLGFDCLTKGGKLVIVGLFGGGAPWALPLI CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCHHHHCCCCCEEEEEEECCCCCCEEEEE PIKAVTIQGSYVGNLRETKELLDLVRAKNIAPIPVTPMPLARANDALHELQKGQLVGRAV EEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEECEEE LTP CCC >Mature Secondary Structure PDHGSESMKSFKVTDFNAPLTEVDEPTPQPFGKQVLIKVKAAGVCHSDLHIWEGGYDLG CCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCCEEECCCCCCC HGRKPLSLKDRGVSLPRTMGHESAGEIVAFGPEVTEAEKGGLKVGDVALVYPWIGCGKCA CCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCCEEECCEEEEECCCCCCCHH TCLAGDENMCLKPASLGVYCDGGYADHMTVPHPRHLIDLKGLDPVTTAPYACSGVTTYSA HHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH LKKVETDFDTPIVIFGAGGLGLMALSLLKAMGGKGAIVVDIDARKREAALAAGALAAVDG HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEECC KAPDALEQLNKAAGEPIRAVIDLVGNAATAQLGFDCLTKGGKLVIVGLFGGGAPWALPLI CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCHHHHCCCCCEEEEEEECCCCCCEEEEE PIKAVTIQGSYVGNLRETKELLDLVRAKNIAPIPVTPMPLARANDALHELQKGQLVGRAV EEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEECEEE LTP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]