| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cya3 [H]
Identifier: 146339432
GI number: 146339432
Start: 2574939
End: 2576486
Strand: Direct
Name: cya3 [H]
Synonym: BRADO2418
Alternate gene names: 146339432
Gene position: 2574939-2576486 (Clockwise)
Preceding gene: 146339430
Following gene: 146339438
Centisome position: 34.53
GC content: 64.6
Gene sequence:
>1548_bases ATGATCGACCGACGCGCGCCAGCAGCCTACAGATTTGGCTCATTTTCCCTCGATGCCGAGACCGGCGCGCTGCTTCGCGA CGGTGCACCTAGTTTGCTTGGCCAGCGCGGCACGGCGCTGCTGCGCCTGCTGCTGGAGCGAGCCGCAGTTCCGGTGAGCA AGGACGCGTTGATCGAAGCCGCGTGGCCGGGGCTCGCCGTCGACGATAGCAATCTCACCGTGCAGATTGCAGCGCTTCGC CGCGCACTCGAGCCAGGCGGCGCATGCTGGATCGAGACCCTTCCACGACGCGGCTATCGCTATATTGGCCCACCGGTGAC GCGCGTCGAAGCGAACGCCGAGGCCTCTCGACCGGCCGCGCTTCCTAGACCCGAAAAGCCTTCGATTGCCGTGCTGCCGT TCGAGCAATCCGGCGAGGCCGGCTGGTTCGCCGACAGCATCGTCGACGACATCATCACCGGAATGTCGCGCATCAGGTGG CTGTTCGTGATCGCGCGCAACTCGAGTTTCGTTTGGCGCGGTCGCATCGCTGACGTGAAGCAAGTCGGCCATGATCTCGG GGTACGTTATGTCTTGCAGGGTAGCGTGCGCCGCGCCGATGATCGCGTCCGCATCAACGCGCAGCTCGCGGACGCCACAA GTGGTGCACAGATTTGGGCCGAACGCTACGACCGCACCGTGGGCGACCTGTTCGCCCTGCAGGACGAGATCGCGCTCGCT GTCGTCGCCGCCATCGAGCCGAGCCTGCGGCGCGCCGAACTTGACCGTATCCTCCGCAAACGGCCCGACAGTCTGGATGC CTACGAGCTTGTTCTGCGCGCGCAACCCGATGTTGATTCCGGCATGCCCGATCGCGCTCATGTCGCTCTGACGCAGTTGT CGCGCGCGCTTGCTCTCGAACCCACCTATGGCCTCGCTCACGGACTGGCCGCGATGAGTCATCACAACCGCTTTTTGCGC GCCGGGCTGAACGAAGACGACCGCATCGCATCGGTGCGGCATGCGCGCCTTGCAATCGAGCATGGCCGCGACGATGCGCT GGCGCTTACCTTTGCCGGGTTCTCGCTTGGCATGGACGCGCATGATCGCCAGGCCGCCTTTGCGGCCTTCGAAGCCGCAC TTGCCTTAAGTCCATCGACCGCGCTTGCCTGGATCCTCGGTAGCGTCGTAGCCGGATGGGCGGGCGACGCTGAGCGTGCG ATTGAGTGGAGCGAGCGCGGCATGCGCTTGAGTCCGTTCGATCCCTGGGCATTCGCGGCTTACGACGCCCAGGCGCTCGG TCATTTCAACCGCGGTAGTTACGCCGAGGCGGCCAGCGCCGCCTACAAGGCCAACCTCGCCAATCCCGGTCATAGCATCA CCTGGGTGCAACTCGCCGCTTCGCTTTCCGCGCTCGGACGTATGGAAGAGGCGAGGGCCGCGGCAGCTTGCGTGCTGGAA TTGCAGCCTGGCTTTCGCATCAGCGGACAATTCGCCGGCGTAGATTGCGCGCCTGAATTGGCATCGAAACTAGGCAAGTC CCTTCGCGCATCTGGATTGCCCGAATGA
Upstream 100 bases:
>100_bases CATGATGGCTCTCCAATGGGTGTTCAGGGAGCTTGAATCTGCCGGTAGATCATCCCAAGGTCGTGAAGCATCTCCGAAAT TGTTACAAAATGTCGCCAAA
Downstream 100 bases:
>100_bases TCCGTCGACGCGCAAACACATCGGTTATTGTGAAGGGTTTCGGATGCCGGCCGCATGATTGACGGTGCGGCACATTCGGG CGGCCGGCGTCCGAAAGCCT
Product: transcriptional regulator
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEAAWPGLAVDDSNLTVQIAALR RALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAALPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRW LFVIARNSSFVWRGRIADVKQVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALEPTYGLAHGLAAMSHHNRFLR AGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDAHDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERA IEWSERGMRLSPFDPWAFAAYDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE
Sequences:
>Translated_515_residues MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEAAWPGLAVDDSNLTVQIAALR RALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAALPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRW LFVIARNSSFVWRGRIADVKQVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALEPTYGLAHGLAAMSHHNRFLR AGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDAHDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERA IEWSERGMRLSPFDPWAFAAYDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE >Mature_515_residues MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEAAWPGLAVDDSNLTVQIAALR RALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAALPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRW LFVIARNSSFVWRGRIADVKQVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALEPTYGLAHGLAAMSHHNRFLR AGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDAHDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERA IEWSERGMRLSPFDPWAFAAYDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 55549; Mature: 55549
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEA CCCCCCCCCEECCCEEECCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHEE AWPGLAVDDSNLTVQIAALRRALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAA CCCCCEEECCCCEEEHHHHHHHCCCCCCCHHHHHCCCCCEECCCCCEEEECCCCCCCCCC LPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRWLFVIARNSSFVWRGRIADVK CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHH QVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA HHHHHHCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALE HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCC PTYGLAHGLAAMSHHNRFLRAGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDA CCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHEECCCCCEEEEEEECCEECCCC HDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERAIEWSERGMRLSPFDPWAFAA CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH YDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE ECCCCEECCEECCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEA CCCCCCCCCEECCCEEECCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHEE AWPGLAVDDSNLTVQIAALRRALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAA CCCCCEEECCCCEEEHHHHHHHCCCCCCCHHHHHCCCCCEECCCCCEEEECCCCCCCCCC LPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRWLFVIARNSSFVWRGRIADVK CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHH QVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA HHHHHHCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALE HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCC PTYGLAHGLAAMSHHNRFLRAGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDA CCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHEECCCCCEEEEEEECCEECCCC HDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERAIEWSERGMRLSPFDPWAFAA CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH YDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE ECCCCEECCEECCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]