Click here to switch to the map view.

The map label for this gene is yhcV [H]

Identifier: 146339430

GI number: 146339430

Start: 2573905

End: 2574282

Strand: Direct

Name: yhcV [H]

Synonym: BRADO2416

Alternate gene names: 146339430

Gene position: 2573905-2574282 (Clockwise)

Preceding gene: 146339421

Following gene: 146339432

Centisome position: 34.52

GC content: 65.08

Gene sequence:

>378_bases
ATGGTCGTCGAAGCCTTGCAAAAGATGCGTGACAACCGCGTCCGGTCGGTGCTGGTCATGGACGACGACGTGCTGGTCGG
CATCGTGACCCAGGGCGACTGCGCTATCAAGGTGCTGCTGCCGGGGCTCGATGCGAAGCAGACGCCGGTCGCCCAGGTGA
TGACGGCCAACCCGGTGACGGTCAGGCCGGACCATCCGCTGGACGGCTGCATGGCCATGATGGCCCAGCGCGGCTTCCGC
CACCTGCCCGTGATCGACGCGGGCAAGGTTGTGGGCGTGATCTCGATCGGCGACGTCGTCAAGAACATCATCCGCGACCT
GGAGCACAATGTGGACGACCTGATGGGTTACATCCTGAAGGACGGCCCGGGGGGGTGA

Upstream 100 bases:

>100_bases
GGCGCGACAGACCAGGGAGTGGAATAGAACATCGATGAGCACAGTCAGAAGCGCTCTGGCCCAGAAGAGTGGCGGCCTGA
TCCAGGTTCGGTCCGGCGAC

Downstream 100 bases:

>100_bases
CAGAGGAGGGTGGTGCAATCCGCAGCATGTCTGCTCGTGACCCGAACGAGACAATTCGGGAGCCGACAGAATTGCATGCT
CAGGCCGTGGGCTTGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVVEALQKMRDNRVRSVLVMDDDVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVTVRPDHPLDGCMAMMAQRGFR
HLPVIDAGKVVGVISIGDVVKNIIRDLEHNVDDLMGYILKDGPGG

Sequences:

>Translated_125_residues
MVVEALQKMRDNRVRSVLVMDDDVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVTVRPDHPLDGCMAMMAQRGFR
HLPVIDAGKVVGVISIGDVVKNIIRDLEHNVDDLMGYILKDGPGG
>Mature_125_residues
MVVEALQKMRDNRVRSVLVMDDDVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVTVRPDHPLDGCMAMMAQRGFR
HLPVIDAGKVVGVISIGDVVKNIIRDLEHNVDDLMGYILKDGPGG

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 13469; Mature: 13469

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVEALQKMRDNRVRSVLVMDDDVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVT
CHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCHHHEEECCCEE
VRPDHPLDGCMAMMAQRGFRHLPVIDAGKVVGVISIGDVVKNIIRDLEHNVDDLMGYILK
ECCCCCHHHHHHHHHHCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHC
DGPGG
CCCCC
>Mature Secondary Structure
MVVEALQKMRDNRVRSVLVMDDDVLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVT
CHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCHHHEEECCCEE
VRPDHPLDGCMAMMAQRGFRHLPVIDAGKVVGVISIGDVVKNIIRDLEHNVDDLMGYILK
ECCCCCHHHHHHHHHHCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHC
DGPGG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]