| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yigI [C]
Identifier: 146339387
GI number: 146339387
Start: 2524733
End: 2525647
Strand: Direct
Name: yigI [C]
Synonym: BRADO2372
Alternate gene names: 146339387
Gene position: 2524733-2525647 (Clockwise)
Preceding gene: 146339385
Following gene: 146339390
Centisome position: 33.86
GC content: 68.63
Gene sequence:
>915_bases ATGTCCGATACCCCGAACAACGCGGCTCCTCCGCCATTCGAACAGCTTGCCGAGGCGATCCGGCATCGCCGCTCGGTCTA TGGCCATATCAGCGGCCTCACGATGGAGCGCTTCGCTCCGGGCGAGGCGTGGTCGATCTTGCCTTATCGCGACGTGTTCG TCGGTGACAGCGACACCGGCGTGATCCATGGCGGCGTCGTCACGGCGATGCTCGACGAGAGCTGCGGCATGGCGGTGCAG CTCGCGCTCGACGGCACGAGCGCCATCACCACCCTGGATCTGCGCATCGACTACCAGAAGCCGGCGACGCCCGGGCTCGA CATCAAGGCGCATGCGGTGTGCTTTCGCGTCACCCGCTCGATCGCCTTCGTCCGCGCCACCGCCTATCAGGACGAGGAGA GCGAGCCGGTCGCGACCGCGACGGCCTGCTTCATGATCGGCGCCAACCGCACCAACATGCTGACCGACCGGCCGGCCTTC ACCGGCGCGCCGCCGCCGCTCGAAGCGCCGGACGGTGGCGCGGGGCTGTTTGCCAATAGCCCGTTCGCCCGCTGCCTCGG CATCCGCCTCGCCGACGACGACACGCTGGTGATGCCGTTCTCGCGGCAGATCATCGGCAATCCGGTGCTGCCCGCGATCC ATGGCGGCATGACCGGCGCGTTCCTCGAAACCGCCGCGATCGTCACCGTGATGCGCGAGCTGGGCGTGCCGCCGCCGAAG CCGATCGGCCTCACCATCAATTATCTGCGCTCGGGCCGCGCGCTCGACAGCATCGCCTCCGCGTCGATCGTCAAGCAGGG CCGCCACGTCGTCGCCTTCGAGGCGCGGGCCTGGCAGGATGACGCCACGAAGCCGATCGCGACCGCGTTCGGCCACTTCA TGTTGCGGCAGCTGCCGGGGCAGGAGCAGGATTGA
Upstream 100 bases:
>100_bases CTCACTGTGTCTTGCGAGACGAGGCTGCTCTTCGCATGCGCGCCTCACCCTCCGGAAAAGCACTTCGCACGCTACGCCGA TCATGATCTAAATCGCAGCC
Downstream 100 bases:
>100_bases GACCGGCCGCTTTGACCCGCGATCACGGCTTGCGCAGGATCTTGTCCATGGCCTTGCCGCGCGCGAGCTCATCGATCAGC TTGTCGAGGTAGCGGACCTC
Product: phenylacetic acid degradation-like protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism; Conserved Domain Protein
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSDTPNNAAPPPFEQLAEAIRHRRSVYGHISGLTMERFAPGEAWSILPYRDVFVGDSDTGVIHGGVVTAMLDESCGMAVQ LALDGTSAITTLDLRIDYQKPATPGLDIKAHAVCFRVTRSIAFVRATAYQDEESEPVATATACFMIGANRTNMLTDRPAF TGAPPPLEAPDGGAGLFANSPFARCLGIRLADDDTLVMPFSRQIIGNPVLPAIHGGMTGAFLETAAIVTVMRELGVPPPK PIGLTINYLRSGRALDSIASASIVKQGRHVVAFEARAWQDDATKPIATAFGHFMLRQLPGQEQD
Sequences:
>Translated_304_residues MSDTPNNAAPPPFEQLAEAIRHRRSVYGHISGLTMERFAPGEAWSILPYRDVFVGDSDTGVIHGGVVTAMLDESCGMAVQ LALDGTSAITTLDLRIDYQKPATPGLDIKAHAVCFRVTRSIAFVRATAYQDEESEPVATATACFMIGANRTNMLTDRPAF TGAPPPLEAPDGGAGLFANSPFARCLGIRLADDDTLVMPFSRQIIGNPVLPAIHGGMTGAFLETAAIVTVMRELGVPPPK PIGLTINYLRSGRALDSIASASIVKQGRHVVAFEARAWQDDATKPIATAFGHFMLRQLPGQEQD >Mature_303_residues SDTPNNAAPPPFEQLAEAIRHRRSVYGHISGLTMERFAPGEAWSILPYRDVFVGDSDTGVIHGGVVTAMLDESCGMAVQL ALDGTSAITTLDLRIDYQKPATPGLDIKAHAVCFRVTRSIAFVRATAYQDEESEPVATATACFMIGANRTNMLTDRPAFT GAPPPLEAPDGGAGLFANSPFARCLGIRLADDDTLVMPFSRQIIGNPVLPAIHGGMTGAFLETAAIVTVMRELGVPPPKP IGLTINYLRSGRALDSIASASIVKQGRHVVAFEARAWQDDATKPIATAFGHFMLRQLPGQEQD
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32485; Mature: 32354
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPNNAAPPPFEQLAEAIRHRRSVYGHISGLTMERFAPGEAWSILPYRDVFVGDSDTG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEECCCCEEEECCCCCC VIHGGVVTAMLDESCGMAVQLALDGTSAITTLDLRIDYQKPATPGLDIKAHAVCFRVTRS EEECCHHEEHHHCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH IAFVRATAYQDEESEPVATATACFMIGANRTNMLTDRPAFTGAPPPLEAPDGGAGLFANS HHHHHEECCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFARCLGIRLADDDTLVMPFSRQIIGNPVLPAIHGGMTGAFLETAAIVTVMRELGVPPPK CHHHHEEEEECCCCEEEECCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC PIGLTINYLRSGRALDSIASASIVKQGRHVVAFEARAWQDDATKPIATAFGHFMLRQLPG CCCEEEEEHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC QEQD CCCC >Mature Secondary Structure SDTPNNAAPPPFEQLAEAIRHRRSVYGHISGLTMERFAPGEAWSILPYRDVFVGDSDTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEECCCCEEEECCCCCC VIHGGVVTAMLDESCGMAVQLALDGTSAITTLDLRIDYQKPATPGLDIKAHAVCFRVTRS EEECCHHEEHHHCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH IAFVRATAYQDEESEPVATATACFMIGANRTNMLTDRPAFTGAPPPLEAPDGGAGLFANS HHHHHEECCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFARCLGIRLADDDTLVMPFSRQIIGNPVLPAIHGGMTGAFLETAAIVTVMRELGVPPPK CHHHHEEEEECCCCEEEECCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC PIGLTINYLRSGRALDSIASASIVKQGRHVVAFEARAWQDDATKPIATAFGHFMLRQLPG CCCEEEEEHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC QEQD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA