Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146339390

Identifier: 146339390

GI number: 146339390

Start: 2527759

End: 2528478

Strand: Direct

Name: 146339390

Synonym: BRADO2375

Alternate gene names: NA

Gene position: 2527759-2528478 (Clockwise)

Preceding gene: 146339387

Following gene: 146339391

Centisome position: 33.9

GC content: 68.47

Gene sequence:

>720_bases
ATGAAACCGGAGGTGATCTGCCTGATGGCCTCGAGCGTCGATGGCCGGACCTGGCCGAGCCGCTGGCGGCCGAAGGGCTC
GGGCGACCTGTTCGAGCAGGTCCACGAGAAGCTCGGCGGCGATGCCTGGCTGATCGGCCGCGTCACCGGCCAGGAATTCG
CCAAGGGCACGACCTATCCCGCGACGACGACCGAACGCTTTCCGCGCGAGAACTGGATCGCGAGGCGCGAGGCCAAGGCC
TATGGCGTGGTGCTCGACGGCCAGGGCAAGATCTGCTGGGGACGTTCGGACATCGGCGGCGATCCGATCGTCGTCGTGCT
CACCGAAGCCGTTTCGGATGCCCATCTCGCAGGTCTGCGCAGCGAGGGCGTCTCCTACATCTTCGCCGGCGCAACCTCGA
TCGACCTGCCGCGCGTCCTCGACATCCTCTCGCGCGAGCTCGGCGTCAAGCGTCTGCTGCTCGAAGGGGGCGGCCATGTC
AACGGCACGTTCCTGCGCGCCGGGCTGGTCGACGAGCTCAACCTCGTGCTGTGTCCGGCCGTGGACGGCGCGAAGGGCGC
GCCGATGGTGTTCGATTCCTCGGAGGCCGAATCCGACCAGCGCGCGCCTGTGACGGCGATGTCGCTGGAAAGCACGACGG
CGCTGGAAGGCGGGGCGCTGTGGCTGCGTTACAAGCTCACCAACGCCGCCGCCGTGCCGGCCCAGGCCAGCCATGGATGA

Upstream 100 bases:

>100_bases
TCGACCGGCGGCATGGCGGCATCGAACGAAACCCACGCCGCTTCGTTGACAACGCCGCGGCGGCCCTGTTCGGTGGGCCG
TCAAACGGCAAGGAGGATGC

Downstream 100 bases:

>100_bases
GCGAAGCGATCACGTCATCATCGTCGGCGCCGGCGCTGCGGGACTGATGGCCGCGCGCGAGCTGTCGCGCGCCGGCCGCA
CGGTGACGCTGCTCGAGGCG

Product: putative 5-amino-6-(5-phosphoribosylamino)uracil reductase

Products: NA

Alternate protein names: Bifunctional Deaminase-Reductase Domain Protein; Deaminase-Reductase Domain-Containing Protein; Riboflavin-Specific Deaminase; Bifunctional Deaminase-Reductase Domain-Containing Protein; Pyrimidine Reductase; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase Protein; Ribd Domain Protein; Pyrimidine Reductase Riboflavin Biosynthesis; 5-Amino-6-(5-Phosphoribosylamino) Uracil Reductase; RibD-Family Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKPEVICLMASSVDGRTWPSRWRPKGSGDLFEQVHEKLGGDAWLIGRVTGQEFAKGTTYPATTTERFPRENWIARREAKA
YGVVLDGQGKICWGRSDIGGDPIVVVLTEAVSDAHLAGLRSEGVSYIFAGATSIDLPRVLDILSRELGVKRLLLEGGGHV
NGTFLRAGLVDELNLVLCPAVDGAKGAPMVFDSSEAESDQRAPVTAMSLESTTALEGGALWLRYKLTNAAAVPAQASHG

Sequences:

>Translated_239_residues
MKPEVICLMASSVDGRTWPSRWRPKGSGDLFEQVHEKLGGDAWLIGRVTGQEFAKGTTYPATTTERFPRENWIARREAKA
YGVVLDGQGKICWGRSDIGGDPIVVVLTEAVSDAHLAGLRSEGVSYIFAGATSIDLPRVLDILSRELGVKRLLLEGGGHV
NGTFLRAGLVDELNLVLCPAVDGAKGAPMVFDSSEAESDQRAPVTAMSLESTTALEGGALWLRYKLTNAAAVPAQASHG
>Mature_239_residues
MKPEVICLMASSVDGRTWPSRWRPKGSGDLFEQVHEKLGGDAWLIGRVTGQEFAKGTTYPATTTERFPRENWIARREAKA
YGVVLDGQGKICWGRSDIGGDPIVVVLTEAVSDAHLAGLRSEGVSYIFAGATSIDLPRVLDILSRELGVKRLLLEGGGHV
NGTFLRAGLVDELNLVLCPAVDGAKGAPMVFDSSEAESDQRAPVTAMSLESTTALEGGALWLRYKLTNAAAVPAQASHG

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25518; Mature: 25518

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPEVICLMASSVDGRTWPSRWRPKGSGDLFEQVHEKLGGDAWLIGRVTGQEFAKGTTYP
CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHCCCCCC
ATTTERFPRENWIARREAKAYGVVLDGQGKICWGRSDIGGDPIVVVLTEAVSDAHLAGLR
CCCHHHCCCHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECHHCHHHHHHHH
SEGVSYIFAGATSIDLPRVLDILSRELGVKRLLLEGGGHVNGTFLRAGLVDELNLVLCPA
CCCCEEEEECCCCCCHHHHHHHHHHHHCHHEEEHHCCCCCCCEEEECCCCCCCCEEEEEC
VDGAKGAPMVFDSSEAESDQRAPVTAMSLESTTALEGGALWLRYKLTNAAAVPAQASHG
CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEECCCEEEEEEEECCCEECCCCCCCC
>Mature Secondary Structure
MKPEVICLMASSVDGRTWPSRWRPKGSGDLFEQVHEKLGGDAWLIGRVTGQEFAKGTTYP
CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHCCCCCC
ATTTERFPRENWIARREAKAYGVVLDGQGKICWGRSDIGGDPIVVVLTEAVSDAHLAGLR
CCCHHHCCCHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECHHCHHHHHHHH
SEGVSYIFAGATSIDLPRVLDILSRELGVKRLLLEGGGHVNGTFLRAGLVDELNLVLCPA
CCCCEEEEECCCCCCHHHHHHHHHHHHCHHEEEHHCCCCCCCEEEECCCCCCCCEEEEEC
VDGAKGAPMVFDSSEAESDQRAPVTAMSLESTTALEGGALWLRYKLTNAAAVPAQASHG
CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEECCCEEEEEEEECCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA