Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146339034
Identifier: 146339034
GI number: 146339034
Start: 2109572
End: 2110477
Strand: Direct
Name: 146339034
Synonym: BRADO1985
Alternate gene names: NA
Gene position: 2109572-2110477 (Clockwise)
Preceding gene: 146339032
Following gene: 146339035
Centisome position: 28.29
GC content: 68.21
Gene sequence:
>906_bases GTGTCTTCCTCAGACGAGTCGTCCATGACCCATGAAGCGTTTGCGTTGTCGCCGATCTCGGCGCGTGCGGCTCGTCCCGA CGAGGGTGACTACGAGGCGATCCGCGAGGCGTTCATGGAGACGGAGCGCGGCCGCTGGTTTCTGGGCGAATACGCCAAGC GCAACCGCAACTCCGATACCCGCATGGTACTCGATGAGGTGGCGCGGCTCGAGCGCGTCGTCGCTGCGCTGCAGCCGGCG GCGATCGCGCCCGGGCTCCACGAGATGGTCACGGCACTGATGGCCGTCGTCGACGAGGCGGCGGAGGTTGCCGCGGCCGC GGCGGCAAGGCTTGCCATCGACGAGCGGCTCGCACCCATCCGCTCGGGCGTGCGGATCCTGGAAGAGATATCCTGGCGTT GGCGGGAGATCGGCTCGGAGGCGCGAACGTGCGACTCGATCGATGCCCAGGTCGAGGCCATCCGGGAGAGCTGTCGCCAG CTTTCGAAGATCAGTATCCCTGATACGATGGAGACATCGTTCGAAGTGATCCGGCGCCGGCTCAGGGAGCTCGCCGAAGA TGGCGGTCTCGAGCCCTCGCTCGCCGCCGACGCTGGACCGATTGTGGAGCCCGTTGCGGCAGCCATGGCCGCCGCCGGCC GGGACGGTCCGCAGGCGGGTCCCGGGATCGAAGCTGTTCCGGATCCGGTTGACGTCGCGCAGGCCGAGACGGCCTCGCGT GAGACCGCCGGCCACTCGTTATCAGCGCCGACGCACGGCGAGAGCGCGGCCGAACCGTCATTACGGTTGCACCCCTCGCT CGGTCCGACGCCGTTCACGGCGGTTGGGCACGGACGGCCGGCCGCCGATCTGCTCACGGCCATTCGCCGCATGAGCCTGA CCGAGAGGATCACGTTCTTCTCTTGA
Upstream 100 bases:
>100_bases AGATGTCGGCGGAATGTGCGTCGTACGGAACAAACAAGCCTCGTCTCCACGATAATGCCTGAATTGCGCATCATGATCGT GGCTTGACAGTTAGTTCCTG
Downstream 100 bases:
>100_bases CGGCGAGCGGCCTGCATCAGCCGCCGTCTGCAGTTATCACCAAGCCTTGATCTCGATGCGCGCGGGTTCGCCCACGACGC GATCGCCATGCTGCCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSSSDESSMTHEAFALSPISARAARPDEGDYEAIREAFMETERGRWFLGEYAKRNRNSDTRMVLDEVARLERVVAALQPA AIAPGLHEMVTALMAVVDEAAEVAAAAAARLAIDERLAPIRSGVRILEEISWRWREIGSEARTCDSIDAQVEAIRESCRQ LSKISIPDTMETSFEVIRRRLRELAEDGGLEPSLAADAGPIVEPVAAAMAAAGRDGPQAGPGIEAVPDPVDVAQAETASR ETAGHSLSAPTHGESAAEPSLRLHPSLGPTPFTAVGHGRPAADLLTAIRRMSLTERITFFS
Sequences:
>Translated_301_residues MSSSDESSMTHEAFALSPISARAARPDEGDYEAIREAFMETERGRWFLGEYAKRNRNSDTRMVLDEVARLERVVAALQPA AIAPGLHEMVTALMAVVDEAAEVAAAAAARLAIDERLAPIRSGVRILEEISWRWREIGSEARTCDSIDAQVEAIRESCRQ LSKISIPDTMETSFEVIRRRLRELAEDGGLEPSLAADAGPIVEPVAAAMAAAGRDGPQAGPGIEAVPDPVDVAQAETASR ETAGHSLSAPTHGESAAEPSLRLHPSLGPTPFTAVGHGRPAADLLTAIRRMSLTERITFFS >Mature_300_residues SSSDESSMTHEAFALSPISARAARPDEGDYEAIREAFMETERGRWFLGEYAKRNRNSDTRMVLDEVARLERVVAALQPAA IAPGLHEMVTALMAVVDEAAEVAAAAAARLAIDERLAPIRSGVRILEEISWRWREIGSEARTCDSIDAQVEAIRESCRQL SKISIPDTMETSFEVIRRRLRELAEDGGLEPSLAADAGPIVEPVAAAMAAAGRDGPQAGPGIEAVPDPVDVAQAETASRE TAGHSLSAPTHGESAAEPSLRLHPSLGPTPFTAVGHGRPAADLLTAIRRMSLTERITFFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32288; Mature: 32156
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSDESSMTHEAFALSPISARAARPDEGDYEAIREAFMETERGRWFLGEYAKRNRNSDT CCCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH RMVLDEVARLERVVAALQPAAIAPGLHEMVTALMAVVDEAAEVAAAAAARLAIDERLAPI HHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSGVRILEEISWRWREIGSEARTCDSIDAQVEAIRESCRQLSKISIPDTMETSFEVIRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LRELAEDGGLEPSLAADAGPIVEPVAAAMAAAGRDGPQAGPGIEAVPDPVDVAQAETASR HHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH ETAGHSLSAPTHGESAAEPSLRLHPSLGPTPFTAVGHGRPAADLLTAIRRMSLTERITFF HHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC S C >Mature Secondary Structure SSSDESSMTHEAFALSPISARAARPDEGDYEAIREAFMETERGRWFLGEYAKRNRNSDT CCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH RMVLDEVARLERVVAALQPAAIAPGLHEMVTALMAVVDEAAEVAAAAAARLAIDERLAPI HHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSGVRILEEISWRWREIGSEARTCDSIDAQVEAIRESCRQLSKISIPDTMETSFEVIRRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LRELAEDGGLEPSLAADAGPIVEPVAAAMAAAGRDGPQAGPGIEAVPDPVDVAQAETASR HHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH ETAGHSLSAPTHGESAAEPSLRLHPSLGPTPFTAVGHGRPAADLLTAIRRMSLTERITFF HHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA