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The map label for this gene is exbD [H]

Identifier: 146338972

GI number: 146338972

Start: 2041236

End: 2041661

Strand: Direct

Name: exbD [H]

Synonym: BRADO1917

Alternate gene names: 146338972

Gene position: 2041236-2041661 (Clockwise)

Preceding gene: 146338971

Following gene: 146338973

Centisome position: 27.37

GC content: 66.9

Gene sequence:

>426_bases
ATGGCCGTCAAGCTCGCCCGGCGTAGCGATGAGTTCGAGGAGACGCACGACATCAACGTGACGCCGTTCATCGACGTCAT
GCTGGTGCTGCTGATCATCTTCATGGTGGCCGCACCGCTCGCCACCGTCGACATCCCGGTCAACCTGCCGGCTATTTCGG
CCGACCCTCAGCCGCGCGCGGAAACGCCCGTCTTCGTGACCTTTAAGGCCGATCGCACGCTTGCCGTCGGCGACCAGAGC
GTTGCGCAGGGCGACATCGCCGCTTCGCTCGACGCCGCCACCAAGTCCGATCACGGCCAGCGCGTGCTGCTGCGCGCCGA
TCAGACGCTGCCCTATGGCGAGGTCATGGCGCTGATGAATGCGCTGCGCCGGGCCGGCTACACCAAGGTGGCGCTGGTCG
CGCTGGAAGACCGGAGCGCGCCGTGA

Upstream 100 bases:

>100_bases
TCTCGACCGGCAGCATGCCGGTCCTGCCGAGGCCCGGCGCAGCGCCATTCGCGCGGTCGATGCGCCGCTGATGTCGATCG
TCAATCCGGCGGAGTGAGGC

Downstream 100 bases:

>100_bases
GCGTCCTGGCGCTCGATCCGTTCGACCACGAGGAGCGCCGCGAGCGGACGTTATGGACGATCGCCGCGATCGCGGTGGGG
TCACTGCATGTCGGGCTCGC

Product: enterobactin uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAVKLARRSDEFEETHDINVTPFIDVMLVLLIIFMVAAPLATVDIPVNLPAISADPQPRAETPVFVTFKADRTLAVGDQS
VAQGDIAASLDAATKSDHGQRVLLRADQTLPYGEVMALMNALRRAGYTKVALVALEDRSAP

Sequences:

>Translated_141_residues
MAVKLARRSDEFEETHDINVTPFIDVMLVLLIIFMVAAPLATVDIPVNLPAISADPQPRAETPVFVTFKADRTLAVGDQS
VAQGDIAASLDAATKSDHGQRVLLRADQTLPYGEVMALMNALRRAGYTKVALVALEDRSAP
>Mature_140_residues
AVKLARRSDEFEETHDINVTPFIDVMLVLLIIFMVAAPLATVDIPVNLPAISADPQPRAETPVFVTFKADRTLAVGDQSV
AQGDIAASLDAATKSDHGQRVLLRADQTLPYGEVMALMNALRRAGYTKVALVALEDRSAP

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=140, Percent_Identity=50, Blast_Score=140, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400
- InterPro:   IPR014170 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15200; Mature: 15069

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKLARRSDEFEETHDINVTPFIDVMLVLLIIFMVAAPLATVDIPVNLPAISADPQPRA
CCEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCC
ETPVFVTFKADRTLAVGDQSVAQGDIAASLDAATKSDHGQRVLLRADQTLPYGEVMALMN
CCCEEEEEECCCEEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
ALRRAGYTKVALVALEDRSAP
HHHHCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
AVKLARRSDEFEETHDINVTPFIDVMLVLLIIFMVAAPLATVDIPVNLPAISADPQPRA
CEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCC
ETPVFVTFKADRTLAVGDQSVAQGDIAASLDAATKSDHGQRVLLRADQTLPYGEVMALMN
CCCEEEEEECCCEEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
ALRRAGYTKVALVALEDRSAP
HHHHCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]