| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tonB
Identifier: 146338973
GI number: 146338973
Start: 2041658
End: 2042581
Strand: Direct
Name: tonB
Synonym: BRADO1918
Alternate gene names: NA
Gene position: 2041658-2042581 (Clockwise)
Preceding gene: 146338972
Following gene: 146338976
Centisome position: 27.38
GC content: 70.13
Gene sequence:
>924_bases GTGAGCGTCCTGGCGCTCGATCCGTTCGACCACGAGGAGCGCCGCGAGCGGACGTTATGGACGATCGCCGCGATCGCGGT GGGGTCACTGCATGTCGGGCTCGCGGTCGGCTATTTGTTGCTGCGTCCCGCGCCGCAGGGGCGCGCGCAGGCTGATGCCT TCGATGTCGTTTTCACGCCGGCCGTCGTGAACGAGCCGGCGCCGATAGCGCAGGAGACGCCCGCCGAATCGGCGCCGCCA ACCGAGCCTCCGAAGGAGGAGCCGGCGAAGGACGAACCGGTCGCGCGCGAGGCCATCGCGGAGCCGGTGCCGCAAGTGCA GCCTGAGCCCGAGCCGCAGGTGACGGCACAGCCGGAGGCGGTCCCGCAAGCCGAGCCGCAGGTCGCGTTGGCTCCTGAGC CGCCGCGTGCCGACGACGTCGTGCCGCCGCCATCGCCGAAGCCGATCGAAGCGAAGCCGCCGGAGCCGAAGCCGGCTCCC AGTCCCGAACGTGTCGAACACAAGCCGGTGGAGAAGAAGGAAACCAAGGAGAAGGCCGAGAGGAAGCCTCCGCCGCCGAA GCCGGTTGCGGCTCCGGCGAGCCGGCCTTCGCGTGTCGCGCTGGCGCCCAATGCAGGCGAGGATAGCGAAGGTTCGCGCG AGGGGCAGGCGAACTGGAACAGCCAGGTGCGAGCGAGCATTGCCCGCGCCGCGAGCTATCCATCCGACGGCAACGGTGCG AGCGGCACGGCGACCGTGACGGTCGTGATCGACCGCAATGGTCGACTGCTGTCACGGCGCCTTGCCGGCAGCTCCGGCTC GCCCGCGCTTGATCGAGCGGCACTGTCGATCGTGGAGCGCGCCGCACCGTTCCCGCGCTTTCCCCCGGTGATGCGGCAGG CGCAAGAAGCGCTCAACGTTCCGCTACATCTGCGTCAGCGTTGA
Upstream 100 bases:
>100_bases AGACGCTGCCCTATGGCGAGGTCATGGCGCTGATGAATGCGCTGCGCCGGGCCGGCTACACCAAGGTGGCGCTGGTCGCG CTGGAAGACCGGAGCGCGCC
Downstream 100 bases:
>100_bases GCGCCGCGTCCCGCCCGCGCGCGTCGCCTATTTCGAGCACTCGGTCAGATCGGTATCGCGCACGACGAACTGCGCGCCTT CCTTGAGCTCGATGTTCTTG
Product: energy transducer TonB, C-terminal region
Products: NA
Alternate protein names: Energy Transducer
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTPAVVNEPAPIAQETPAESAPP TEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEAVPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAP SPERVEHKPVEKKETKEKAERKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNVPLHLRQR
Sequences:
>Translated_307_residues MSVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTPAVVNEPAPIAQETPAESAPP TEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEAVPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAP SPERVEHKPVEKKETKEKAERKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNVPLHLRQR >Mature_306_residues SVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTPAVVNEPAPIAQETPAESAPPT EPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEAVPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAPS PERVEHKPVEKKETKEKAERKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGAS GTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNVPLHLRQR
Specific function: Unknown
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32673; Mature: 32542
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTP CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECH AVVNEPAPIAQETPAESAPPTEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC VPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAPSPERVEHKPVEKKETKEKAE CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNV CCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC PLHLRQR CEEECCC >Mature Secondary Structure SVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTP CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECH AVVNEPAPIAQETPAESAPPTEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC VPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAPSPERVEHKPVEKKETKEKAE CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNV CCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC PLHLRQR CEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA