Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is tonB

Identifier: 146338973

GI number: 146338973

Start: 2041658

End: 2042581

Strand: Direct

Name: tonB

Synonym: BRADO1918

Alternate gene names: NA

Gene position: 2041658-2042581 (Clockwise)

Preceding gene: 146338972

Following gene: 146338976

Centisome position: 27.38

GC content: 70.13

Gene sequence:

>924_bases
GTGAGCGTCCTGGCGCTCGATCCGTTCGACCACGAGGAGCGCCGCGAGCGGACGTTATGGACGATCGCCGCGATCGCGGT
GGGGTCACTGCATGTCGGGCTCGCGGTCGGCTATTTGTTGCTGCGTCCCGCGCCGCAGGGGCGCGCGCAGGCTGATGCCT
TCGATGTCGTTTTCACGCCGGCCGTCGTGAACGAGCCGGCGCCGATAGCGCAGGAGACGCCCGCCGAATCGGCGCCGCCA
ACCGAGCCTCCGAAGGAGGAGCCGGCGAAGGACGAACCGGTCGCGCGCGAGGCCATCGCGGAGCCGGTGCCGCAAGTGCA
GCCTGAGCCCGAGCCGCAGGTGACGGCACAGCCGGAGGCGGTCCCGCAAGCCGAGCCGCAGGTCGCGTTGGCTCCTGAGC
CGCCGCGTGCCGACGACGTCGTGCCGCCGCCATCGCCGAAGCCGATCGAAGCGAAGCCGCCGGAGCCGAAGCCGGCTCCC
AGTCCCGAACGTGTCGAACACAAGCCGGTGGAGAAGAAGGAAACCAAGGAGAAGGCCGAGAGGAAGCCTCCGCCGCCGAA
GCCGGTTGCGGCTCCGGCGAGCCGGCCTTCGCGTGTCGCGCTGGCGCCCAATGCAGGCGAGGATAGCGAAGGTTCGCGCG
AGGGGCAGGCGAACTGGAACAGCCAGGTGCGAGCGAGCATTGCCCGCGCCGCGAGCTATCCATCCGACGGCAACGGTGCG
AGCGGCACGGCGACCGTGACGGTCGTGATCGACCGCAATGGTCGACTGCTGTCACGGCGCCTTGCCGGCAGCTCCGGCTC
GCCCGCGCTTGATCGAGCGGCACTGTCGATCGTGGAGCGCGCCGCACCGTTCCCGCGCTTTCCCCCGGTGATGCGGCAGG
CGCAAGAAGCGCTCAACGTTCCGCTACATCTGCGTCAGCGTTGA

Upstream 100 bases:

>100_bases
AGACGCTGCCCTATGGCGAGGTCATGGCGCTGATGAATGCGCTGCGCCGGGCCGGCTACACCAAGGTGGCGCTGGTCGCG
CTGGAAGACCGGAGCGCGCC

Downstream 100 bases:

>100_bases
GCGCCGCGTCCCGCCCGCGCGCGTCGCCTATTTCGAGCACTCGGTCAGATCGGTATCGCGCACGACGAACTGCGCGCCTT
CCTTGAGCTCGATGTTCTTG

Product: energy transducer TonB, C-terminal region

Products: NA

Alternate protein names: Energy Transducer

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTPAVVNEPAPIAQETPAESAPP
TEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEAVPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAP
SPERVEHKPVEKKETKEKAERKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA
SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNVPLHLRQR

Sequences:

>Translated_307_residues
MSVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTPAVVNEPAPIAQETPAESAPP
TEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEAVPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAP
SPERVEHKPVEKKETKEKAERKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA
SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNVPLHLRQR
>Mature_306_residues
SVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTPAVVNEPAPIAQETPAESAPPT
EPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEAVPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAPS
PERVEHKPVEKKETKEKAERKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGAS
GTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNVPLHLRQR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32673; Mature: 32542

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTP
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECH
AVVNEPAPIAQETPAESAPPTEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
VPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAPSPERVEHKPVEKKETKEKAE
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNV
CCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PLHLRQR
CEEECCC
>Mature Secondary Structure 
SVLALDPFDHEERRERTLWTIAAIAVGSLHVGLAVGYLLLRPAPQGRAQADAFDVVFTP
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECH
AVVNEPAPIAQETPAESAPPTEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPEA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
VPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAPSPERVEHKPVEKKETKEKAE
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNGA
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
SGTATVTVVIDRNGRLLSRRLAGSSGSPALDRAALSIVERAAPFPRFPPVMRQAQEALNV
CCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PLHLRQR
CEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA