| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338960
Identifier: 146338960
GI number: 146338960
Start: 2029613
End: 2030236
Strand: Direct
Name: 146338960
Synonym: BRADO1904
Alternate gene names: NA
Gene position: 2029613-2030236 (Clockwise)
Preceding gene: 146338959
Following gene: 146338961
Centisome position: 27.22
GC content: 63.94
Gene sequence:
>624_bases GTGACCGAACGCGACCTGCACTTCTACGAACCGAAGAACGGCCACGGCCTCAAGCACGATCCCTTCAACGCCATCATCGC GCCGCGTCCGATCGGCTGGATCTCGTCGCGCGATCCGGACGGCCACGTCAATCTCGCGCCCTACAGCTTCTTCAACGCCT TCAACTACACGCCGCCGATCATCGGTTTCTCCTCCACGCAGTGGAAGGACTCGGCCGCCAACATCAAGGACACCGGAGAG TTCGTCTGGAACCTGGTGACCCGCGACCTCGCGACCCAGATGAACGCGACCGCCGCGCATGTCGCGCGCGATGTCGACGA GTTCAAGCTCGCCGGTGTCACGCCGGTGCCCTGCAAGCACGTCAACGTGCCGCGCGTCGGTGAAAGCCCGGTAGCGTTCG AATGCAAGGTCACGCAGATCATCCAGCTGCAGGGCGCCGACGGCAGGAAGGCGCAGGCCTGGCTGACGCTCGGCGAGGTC GTCGCCGTGCATATCGACAAGACGCTGATCAAGGATGGCGTCTATCAGACCGCGCTGGCGCACCCGATCGTTCGCGCCGG CCGCCGCGGCGACTATTTCGAGATCAAGGCCGAAGACATGTTCGAGATGATCAGGCCGGACTGA
Upstream 100 bases:
>100_bases GGAATCTCGATATTCCGGGTTCGCCTCTCTCGAACAAAATGGCTCCGCCATTTTGTCGCGCGAGGCGCTCCGGAATGACT GTACCCAGGGGGACCACGGC
Downstream 100 bases:
>100_bases CCGCCGATCATCGCGACGGCCCAGCCGGCTTCATGGAGACCACCTGACGTGAGCGAAACGACCGCCCCTGCCGCGCCGAC CGAGCCGCGCGGCGATCTCT
Product: putative flavoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTERDLHFYEPKNGHGLKHDPFNAIIAPRPIGWISSRDPDGHVNLAPYSFFNAFNYTPPIIGFSSTQWKDSAANIKDTGE FVWNLVTRDLATQMNATAAHVARDVDEFKLAGVTPVPCKHVNVPRVGESPVAFECKVTQIIQLQGADGRKAQAWLTLGEV VAVHIDKTLIKDGVYQTALAHPIVRAGRRGDYFEIKAEDMFEMIRPD
Sequences:
>Translated_207_residues MTERDLHFYEPKNGHGLKHDPFNAIIAPRPIGWISSRDPDGHVNLAPYSFFNAFNYTPPIIGFSSTQWKDSAANIKDTGE FVWNLVTRDLATQMNATAAHVARDVDEFKLAGVTPVPCKHVNVPRVGESPVAFECKVTQIIQLQGADGRKAQAWLTLGEV VAVHIDKTLIKDGVYQTALAHPIVRAGRRGDYFEIKAEDMFEMIRPD >Mature_206_residues TERDLHFYEPKNGHGLKHDPFNAIIAPRPIGWISSRDPDGHVNLAPYSFFNAFNYTPPIIGFSSTQWKDSAANIKDTGEF VWNLVTRDLATQMNATAAHVARDVDEFKLAGVTPVPCKHVNVPRVGESPVAFECKVTQIIQLQGADGRKAQAWLTLGEVV AVHIDKTLIKDGVYQTALAHPIVRAGRRGDYFEIKAEDMFEMIRPD
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 23083; Mature: 22952
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERDLHFYEPKNGHGLKHDPFNAIIAPRPIGWISSRDPDGHVNLAPYSFFNAFNYTPPI CCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCE IGFSSTQWKDSAANIKDTGEFVWNLVTRDLATQMNATAAHVARDVDEFKLAGVTPVPCKH ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCC VNVPRVGESPVAFECKVTQIIQLQGADGRKAQAWLTLGEVVAVHIDKTLIKDGVYQTALA CCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHEEHHHEEHHHHHHHHHHCCHHHHHHH HPIVRAGRRGDYFEIKAEDMFEMIRPD HHHHHCCCCCCEEEECHHHHHHHHCCC >Mature Secondary Structure TERDLHFYEPKNGHGLKHDPFNAIIAPRPIGWISSRDPDGHVNLAPYSFFNAFNYTPPI CCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCE IGFSSTQWKDSAANIKDTGEFVWNLVTRDLATQMNATAAHVARDVDEFKLAGVTPVPCKH ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCC VNVPRVGESPVAFECKVTQIIQLQGADGRKAQAWLTLGEVVAVHIDKTLIKDGVYQTALA CCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHEEHHHEEHHHHHHHHHHCCHHHHHHH HPIVRAGRRGDYFEIKAEDMFEMIRPD HHHHHCCCCCCEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]