Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146338959

Identifier: 146338959

GI number: 146338959

Start: 2028863

End: 2029474

Strand: Direct

Name: 146338959

Synonym: BRADO1903

Alternate gene names: NA

Gene position: 2028863-2029474 (Clockwise)

Preceding gene: 146338958

Following gene: 146338960

Centisome position: 27.21

GC content: 65.52

Gene sequence:

>612_bases
ATGATGACGCTGGTCTCCGAACACATCGAACCTGATACGCGCGAACGCATCCTCGTCGTCGCGGAGCGTCTGTTTCGGCA
GATCGGCTACCAGAAGACCACCGTGGCCGACATCGCCAAGGAGCTCCGCATGAGCCCGGCGAACGTCTACCGGTTCTTCG
AGTCGAAGAAGGCGATCCACCAGGGCGTCGCCCGCGAGCTGATGGGCCAGGTCGAGGCGGCGGCGATCGCGATCGCCGAG
CGCGGCGGCCCGGCCGTGCCGCGGCTGCGCGAGCTGCTCGGCACCATCCATCGCATGAACACCGAGCGCTATGTCGGCGA
CAACAAGCTTCACGAGATGGTCGCCGTCGCGATGGAGGAGAGCTGGGAGGTCTGCGAGGCGCACATGATGCTGATCACCG
AGATCATCGGCCGCGTGATCGGGCAGGGCGCCGCGTCCGGCGAGTTCGCTGTCAGTGACATCGTGCTGGCCACGAAATGC
GCAACGACGGCGATGATGCGCTTCTTCCATCCGCAGATGATCGCGCAATGCGCGACCAAGCCTGGCCCGACCGTGGGCGA
GATGATCGATTTCGTTCTGGCGGGGCTTGGTTCCCGGGGCGGCACGGTCTAG

Upstream 100 bases:

>100_bases
AGCTGCGCAGGATCATTCTGCAGCGCAGCACGTTGATGGACCGGCACCGGCCCTTCCGCTCGCCGAGGCCGCCGAATGAA
GGGCGAACAAGATCGCAGGC

Downstream 100 bases:

>100_bases
GTTGCAGTCATTCCGGGGTGATGCGAAGCATCGAGCCCGGAATCTCGATATTCCGGGTTCGCCTCTCTCGAACAAAATGG
CTCCGCCATTTTGTCGCGCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Activator; Transcriptional Regulatory Protein; TetR Family Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator Luxr

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MMTLVSEHIEPDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFESKKAIHQGVARELMGQVEAAAIAIAE
RGGPAVPRLRELLGTIHRMNTERYVGDNKLHEMVAVAMEESWEVCEAHMMLITEIIGRVIGQGAASGEFAVSDIVLATKC
ATTAMMRFFHPQMIAQCATKPGPTVGEMIDFVLAGLGSRGGTV

Sequences:

>Translated_203_residues
MMTLVSEHIEPDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFESKKAIHQGVARELMGQVEAAAIAIAE
RGGPAVPRLRELLGTIHRMNTERYVGDNKLHEMVAVAMEESWEVCEAHMMLITEIIGRVIGQGAASGEFAVSDIVLATKC
ATTAMMRFFHPQMIAQCATKPGPTVGEMIDFVLAGLGSRGGTV
>Mature_203_residues
MMTLVSEHIEPDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFESKKAIHQGVARELMGQVEAAAIAIAE
RGGPAVPRLRELLGTIHRMNTERYVGDNKLHEMVAVAMEESWEVCEAHMMLITEIIGRVIGQGAASGEFAVSDIVLATKC
ATTAMMRFFHPQMIAQCATKPGPTVGEMIDFVLAGLGSRGGTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22302; Mature: 22302

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLVSEHIEPDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFESKKAIH
CCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGVARELMGQVEAAAIAIAERGGPAVPRLRELLGTIHRMNTERYVGDNKLHEMVAVAMEE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
SWEVCEAHMMLITEIIGRVIGQGAASGEFAVSDIVLATKCATTAMMRFFHPQMIAQCATK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGPTVGEMIDFVLAGLGSRGGTV
CCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMTLVSEHIEPDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFESKKAIH
CCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGVARELMGQVEAAAIAIAERGGPAVPRLRELLGTIHRMNTERYVGDNKLHEMVAVAMEE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
SWEVCEAHMMLITEIIGRVIGQGAASGEFAVSDIVLATKCATTAMMRFFHPQMIAQCATK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGPTVGEMIDFVLAGLGSRGGTV
CCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA