| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yeaX [H]
Identifier: 146338929
GI number: 146338929
Start: 1994339
End: 1995319
Strand: Direct
Name: yeaX [H]
Synonym: BRADO1869
Alternate gene names: 146338929
Gene position: 1994339-1995319 (Clockwise)
Preceding gene: 146338928
Following gene: 146338932
Centisome position: 26.75
GC content: 69.32
Gene sequence:
>981_bases ATGCGCTTCCAGGACCATTGGACGACCGCGACGCTGGTGGCGACGCGCGATCTCGCATCCGGGATTCGCGAGTTCATCCT GCGGCCCGACGGCTACGTCTGCGCGCCCTATCCGGTGGGCAGCCACATCAAGGTGAGCGTTCTGATCGGCGGGCAGCCGG ATGTGCGCTCTTATTCGCTGGTCGGCGAGGCCGATCCGCGCGGCTACCGGATCGCCGTGCGCCATGCCGACGATTCCCGC GGCGGCTCGCGCTATCTGTGGTCGCTGCAGCCGGGCGCGCGGCTCGACGTGACCAGCCCGACCTCGCTGCTGCAGGTCGG CTGGCAATATGAGCATTATTGCCTGGTGGCCGGCGGCATCGGCATCACGCCGCTGGTCGGTGCTGCGCAGGCGTTGTTGC GCAAGACGCCGAACGTGTCGCTGCACTATGCGGTGAAGTCCCGGGCCGATGCGGCCTATGCCGATGAGCTCGCGACACTG CTCGGCGGCCGGCTCGCGGTCTACGCCGCCGACCAGTCGCAGCGGCTGGATCTCGCCGGCCTGTTTGCCGGGCTGCCGGC CGGCACGGCGGTGCTGTTCTGCGGGCCGATGCGCATGCTCGATGCGGCGCGCAGTGCCTGGGCGGCGAGCGGTCGCGCAC CGGCCGATCTCAGCTACGAAACGTTCGGCTCGAGCGGGCGTTTGTCGACCGAGCCGTTCAAGGTCCGGCTGCGCGGCTCC GGCGAGGAGATCGTGGTCCCGCGCGACCGCTCGATGCTCGACGTGCTCAACGCCGCCGGCCATGAGGTCATGGCCGATTG CCGGCGCGGCGAGTGCGGCGTCTGTGCGATCGACGTGGTCGAGGTGGACGGCGAGATCGACCATCGCGACGTGTTCTTCA GCGCCGAGCAGAAGCATGAGAGCCGCAAGCTCTGCGCCTGCGTCTCGCGCGCCCATGGCGTGGTGACGATCGATACTTTG GAGCGCGCCGACGCGCTCTGA
Upstream 100 bases:
>100_bases CGCGCAATTTGCGGCTGGCTGTCAAGGCGCGCGGCCCGATGGACCTCGTGCCGGCCGCCGCGCTGATCAAGGCGTCGATC TCGAACTGACGGAGAGGATC
Downstream 100 bases:
>100_bases GTCGAGTTGCACGTGGCGCCGACTATTTGTCGGCGAGATTGACCGGCATCGCCGCTTGCGGCTTGGTGCCGGATTTGCGG CTGCCCTGTTCCGCGGCCAC
Product: putative oxydoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRFQDHWTTATLVATRDLASGIREFILRPDGYVCAPYPVGSHIKVSVLIGGQPDVRSYSLVGEADPRGYRIAVRHADDSR GGSRYLWSLQPGARLDVTSPTSLLQVGWQYEHYCLVAGGIGITPLVGAAQALLRKTPNVSLHYAVKSRADAAYADELATL LGGRLAVYAADQSQRLDLAGLFAGLPAGTAVLFCGPMRMLDAARSAWAASGRAPADLSYETFGSSGRLSTEPFKVRLRGS GEEIVVPRDRSMLDVLNAAGHEVMADCRRGECGVCAIDVVEVDGEIDHRDVFFSAEQKHESRKLCACVSRAHGVVTIDTL ERADAL
Sequences:
>Translated_326_residues MRFQDHWTTATLVATRDLASGIREFILRPDGYVCAPYPVGSHIKVSVLIGGQPDVRSYSLVGEADPRGYRIAVRHADDSR GGSRYLWSLQPGARLDVTSPTSLLQVGWQYEHYCLVAGGIGITPLVGAAQALLRKTPNVSLHYAVKSRADAAYADELATL LGGRLAVYAADQSQRLDLAGLFAGLPAGTAVLFCGPMRMLDAARSAWAASGRAPADLSYETFGSSGRLSTEPFKVRLRGS GEEIVVPRDRSMLDVLNAAGHEVMADCRRGECGVCAIDVVEVDGEIDHRDVFFSAEQKHESRKLCACVSRAHGVVTIDTL ERADAL >Mature_326_residues MRFQDHWTTATLVATRDLASGIREFILRPDGYVCAPYPVGSHIKVSVLIGGQPDVRSYSLVGEADPRGYRIAVRHADDSR GGSRYLWSLQPGARLDVTSPTSLLQVGWQYEHYCLVAGGIGITPLVGAAQALLRKTPNVSLHYAVKSRADAAYADELATL LGGRLAVYAADQSQRLDLAGLFAGLPAGTAVLFCGPMRMLDAARSAWAASGRAPADLSYETFGSSGRLSTEPFKVRLRGS GEEIVVPRDRSMLDVLNAAGHEVMADCRRGECGVCAIDVVEVDGEIDHRDVFFSAEQKHESRKLCACVSRAHGVVTIDTL ERADAL
Specific function: Unknown
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=301, Percent_Identity=33.2225913621262, Blast_Score=151, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35116; Mature: 35116
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFQDHWTTATLVATRDLASGIREFILRPDGYVCAPYPVGSHIKVSVLIGGQPDVRSYSL CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCCCEEEE VGEADPRGYRIAVRHADDSRGGSRYLWSLQPGARLDVTSPTSLLQVGWQYEHYCLVAGGI EECCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEECCCCHHHHHCCCCCCEEEEEECCC GITPLVGAAQALLRKTPNVSLHYAVKSRADAAYADELATLLGGRLAVYAADQSQRLDLAG CCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCHHH LFAGLPAGTAVLFCGPMRMLDAARSAWAASGRAPADLSYETFGSSGRLSTEPFKVRLRGS HHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECC GEEIVVPRDRSMLDVLNAAGHEVMADCRRGECGVCAIDVVEVDGEIDHRDVFFSAEQKHE CCEEEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEEHHHHHH SRKLCACVSRAHGVVTIDTLERADAL HHHHHHHHHHCCCEEEEECCHHCCCC >Mature Secondary Structure MRFQDHWTTATLVATRDLASGIREFILRPDGYVCAPYPVGSHIKVSVLIGGQPDVRSYSL CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCCCEEEE VGEADPRGYRIAVRHADDSRGGSRYLWSLQPGARLDVTSPTSLLQVGWQYEHYCLVAGGI EECCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEECCCCHHHHHCCCCCCEEEEEECCC GITPLVGAAQALLRKTPNVSLHYAVKSRADAAYADELATLLGGRLAVYAADQSQRLDLAG CCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCHHH LFAGLPAGTAVLFCGPMRMLDAARSAWAASGRAPADLSYETFGSSGRLSTEPFKVRLRGS HHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECC GEEIVVPRDRSMLDVLNAAGHEVMADCRRGECGVCAIDVVEVDGEIDHRDVFFSAEQKHE CCEEEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEEHHHHHH SRKLCACVSRAHGVVTIDTLERADAL HHHHHHHHHHCCCEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]