| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338848
Identifier: 146338848
GI number: 146338848
Start: 1906255
End: 1907478
Strand: Reverse
Name: 146338848
Synonym: BRADO1787
Alternate gene names: NA
Gene position: 1907478-1906255 (Counterclockwise)
Preceding gene: 146338849
Following gene: 146338847
Centisome position: 25.58
GC content: 68.95
Gene sequence:
>1224_bases ATGAGCGACGTTTCATCTCTCCTGTCCGCCCGCGCCGTGCGCGAGCGGGCGCATCAGCTGCTTGCGCTCGGGCTCGACGA CAAGCTGCCGCATTTTCGCGTCGATCTCGGCAAGCTGGATGCGATTGCGGATCTCGTGCTCGACGTGACCAACAAGGCTT ATCCGAGCGGCGAGGTGCCGTTTCATTCGCGCTGGCGACACTTCGTGGTCGGCGGGACCGATCGCTGGACGGCCGTTGCC GAGAAGACGCAATGGCTCGACGCGGCGGCACGCGCGCGCGCCGAGTTCGATCTCGCCATCACCAGCGTGCTGCTCGACGC CGGCGCCGGCGCCTCCTGGCGCTATCAGGATGCCGTGACCGGCACACGGATCGGCCGCTCCGAAGGGCTCGCGCTGGCGA GCCTCGACATGTTCGCACGCGGCGCCTTCTCGGCCGATGGGCGCGATCCTCTGCGCGCTGATGCGGCGAAGCTGCGCCAG CTCACGGTCGCCGATCTCGAACGCGGCTTCCAGGTCGGCCCCGACAATCCGCTGGTCGGATTGGAGGGCCGCGTCGCGCT GCTGCGCCGGTTGGGCGAGGTGACGGCTGCAAAGCCGGAGATCTTCGGAACACAGGATGCTCCGCGTACCGGCGGTCTGT TCGATCACCTCGCCGCCAGCGCAACCGGCGGCCATCTCCAGGCCGCCGACATCCTGCAGCAGGTGCTGCTGCAGCTCGGG CCGATCTGGCCGTCGCGGCTGACGCTGCAAGGCGTCGCGCTCGGCGATTGCTGGCGGCATCCATCACTGGTCGCCGACGA TCAGACCACCGGTCTCGTCCCGCTGCACAAGCTGTCGCAATGGCTGAGCTATTCGCTGATCGAACCGCTGCAGCGCGCGC GCCTCGTGGTAGACAACATCGACGGTCTCACCGGCCTCGCCGAATACCGCAACGGCGGCCTGTTCGTCGACGGCGGCGTA CTGGTGTTGCGCGATCCCGCCGATGCCACGCGCCCCCACGAGGTTGACTCCCCGCTCGTGGTGGAATGGCGCGCGCTGAC TGTCGCCCTGCTCGACCGTCTGGCCGCACTGATCCGGGAGCGTACCGGCCAGACGCCCGAGCAACTGCCGCTCGCCCGCA TCCTCGAAGGCGGCACCTGGGCCGCCGGCCGCAAGCTCGCCTTCGCCCGCCGCCCCGACGGCACGCCGCCTCTGACCATC ATCAGCGACGGCACGGTGTTTTAA
Upstream 100 bases:
>100_bases AAGGCCGCGGGCTATTTCTCGCTGGAGCCGCAGAAGCCGCAAGAGCTCGGCGACACCGTCGGCCGCCCGCTCGAGAAGTA CTGAGGGCTGGCAGCCGATC
Downstream 100 bases:
>100_bases GAGGTGTTAGCCAAACCTACCGGTCTCGCCGCTCCGTCATTGCGAGCGCAGCGAAGCAATCCAGGGGCCAGGAAGAAAGT CTGGATTGCTTCGCCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSDVSSLLSARAVRERAHQLLALGLDDKLPHFRVDLGKLDAIADLVLDVTNKAYPSGEVPFHSRWRHFVVGGTDRWTAVA EKTQWLDAAARARAEFDLAITSVLLDAGAGASWRYQDAVTGTRIGRSEGLALASLDMFARGAFSADGRDPLRADAAKLRQ LTVADLERGFQVGPDNPLVGLEGRVALLRRLGEVTAAKPEIFGTQDAPRTGGLFDHLAASATGGHLQAADILQQVLLQLG PIWPSRLTLQGVALGDCWRHPSLVADDQTTGLVPLHKLSQWLSYSLIEPLQRARLVVDNIDGLTGLAEYRNGGLFVDGGV LVLRDPADATRPHEVDSPLVVEWRALTVALLDRLAALIRERTGQTPEQLPLARILEGGTWAAGRKLAFARRPDGTPPLTI ISDGTVF
Sequences:
>Translated_407_residues MSDVSSLLSARAVRERAHQLLALGLDDKLPHFRVDLGKLDAIADLVLDVTNKAYPSGEVPFHSRWRHFVVGGTDRWTAVA EKTQWLDAAARARAEFDLAITSVLLDAGAGASWRYQDAVTGTRIGRSEGLALASLDMFARGAFSADGRDPLRADAAKLRQ LTVADLERGFQVGPDNPLVGLEGRVALLRRLGEVTAAKPEIFGTQDAPRTGGLFDHLAASATGGHLQAADILQQVLLQLG PIWPSRLTLQGVALGDCWRHPSLVADDQTTGLVPLHKLSQWLSYSLIEPLQRARLVVDNIDGLTGLAEYRNGGLFVDGGV LVLRDPADATRPHEVDSPLVVEWRALTVALLDRLAALIRERTGQTPEQLPLARILEGGTWAAGRKLAFARRPDGTPPLTI ISDGTVF >Mature_406_residues SDVSSLLSARAVRERAHQLLALGLDDKLPHFRVDLGKLDAIADLVLDVTNKAYPSGEVPFHSRWRHFVVGGTDRWTAVAE KTQWLDAAARARAEFDLAITSVLLDAGAGASWRYQDAVTGTRIGRSEGLALASLDMFARGAFSADGRDPLRADAAKLRQL TVADLERGFQVGPDNPLVGLEGRVALLRRLGEVTAAKPEIFGTQDAPRTGGLFDHLAASATGGHLQAADILQQVLLQLGP IWPSRLTLQGVALGDCWRHPSLVADDQTTGLVPLHKLSQWLSYSLIEPLQRARLVVDNIDGLTGLAEYRNGGLFVDGGVL VLRDPADATRPHEVDSPLVVEWRALTVALLDRLAALIRERTGQTPEQLPLARILEGGTWAAGRKLAFARRPDGTPPLTII SDGTVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43951; Mature: 43819
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVSSLLSARAVRERAHQLLALGLDDKLPHFRVDLGKLDAIADLVLDVTNKAYPSGEVP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCC FHSRWRHFVVGGTDRWTAVAEKTQWLDAAARARAEFDLAITSVLLDAGAGASWRYQDAVT HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHCCC GTRIGRSEGLALASLDMFARGAFSADGRDPLRADAAKLRQLTVADLERGFQVGPDNPLVG CCCCCCCCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC LEGRVALLRRLGEVTAAKPEIFGTQDAPRTGGLFDHLAASATGGHLQAADILQQVLLQLG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC PIWPSRLTLQGVALGDCWRHPSLVADDQTTGLVPLHKLSQWLSYSLIEPLQRARLVVDNI CCCCCCEEEECEEEHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DGLTGLAEYRNGGLFVDGGVLVLRDPADATRPHEVDSPLVVEWRALTVALLDRLAALIRE CCHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH RTGQTPEQLPLARILEGGTWAAGRKLAFARRPDGTPPLTIISDGTVF HCCCCHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure SDVSSLLSARAVRERAHQLLALGLDDKLPHFRVDLGKLDAIADLVLDVTNKAYPSGEVP CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCC FHSRWRHFVVGGTDRWTAVAEKTQWLDAAARARAEFDLAITSVLLDAGAGASWRYQDAVT HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHCCC GTRIGRSEGLALASLDMFARGAFSADGRDPLRADAAKLRQLTVADLERGFQVGPDNPLVG CCCCCCCCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC LEGRVALLRRLGEVTAAKPEIFGTQDAPRTGGLFDHLAASATGGHLQAADILQQVLLQLG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC PIWPSRLTLQGVALGDCWRHPSLVADDQTTGLVPLHKLSQWLSYSLIEPLQRARLVVDNI CCCCCCEEEECEEEHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DGLTGLAEYRNGGLFVDGGVLVLRDPADATRPHEVDSPLVVEWRALTVALLDRLAALIRE CCHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH RTGQTPEQLPLARILEGGTWAAGRKLAFARRPDGTPPLTIISDGTVF HCCCCHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA