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The map label for this gene is glcC [C]

Identifier: 146338771

GI number: 146338771

Start: 1820278

End: 1820991

Strand: Reverse

Name: glcC [C]

Synonym: BRADO1705

Alternate gene names: 146338771

Gene position: 1820991-1820278 (Counterclockwise)

Preceding gene: 146338784

Following gene: 146338770

Centisome position: 24.42

GC content: 65.55

Gene sequence:

>714_bases
ATGCGAATCGTGTCTCCCGCCCCCTCCCTGGTCGAGCAGGTCGTCGAAGCGATCACTGACGAGATCGTCAGCGGCGTGCT
GACGTCCGGCTCACGGCTGATCCAGGATGATCTCGCCCAGGCTTACGGGGTTTCACGCCAGCCCGTTCAACAAGCCCTGA
TGCTGTTGCGCGGCTGCGGACTGGTGCAGAGCGCGCCAGGACGCGGACTGATCGTGGCACCGCTCGACCCCAGCTTCGTT
CGTGATCTCTACGAGATGCGCGCCGTGCTCGAAGGTCTTGCAGCGCGGCTCGCCGCCGAGCGCGCCGGCGATCGCGCCGG
ACGCGAAGGGCCCGCCTACATCGCCGCAGGTCACGAAGCGCTCAAGAGCGGGTTGGTGAGCCGCAAGATCGAGACCGACA
TCGCCTTCCACCGGTTCTTGAGCGGACTCTCCGGCAATCCGCTGATCGACGAGACGATGGCGCCGCATTGGCCCTATCTG
AAGCGTGTGATGTCCGATGTGCTGCAGAAGGAAGAAAGCATGTCGCAGACCGTCTGGGACGAGCATGAGGACATTCTGGC
CGCGGTGATCGAGGGGCGCAGCGCCGATGCCGAACGCCTGAGCCGCGAGCACATCTCGCGCGCGGCGGGCGTTTTCATTC
ACCACCTCGAAGCGCAGCAGGGAGACCGGCCGAGGCAGCGGCGCATGCTCTCGGCACGCAAGATGCCGCTATGA

Upstream 100 bases:

>100_bases
AGCTTGGCTTCTCATTTTTGAATTCGTACTCTGAATTCGAATTCGTCGCAAATGGATTTTTGCGCTTGGCGTGCTATTCT
TCTCTAAAATGTGATGGCCC

Downstream 100 bases:

>100_bases
GCAGACGAGCCCGCCCAGCCGAGGCAAGAGTGCAGCGCTCAGGATGCCAGCCTCACATGACGGATGAGACATGAGATCCG
ATTTGCTGCAGGAGGCTCCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR Family Regulatory; Regulatory Protein; Transcriptional Regulator Gntr Family; GntR Family Transcription Regulator; Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein GntR HTHGntR

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MRIVSPAPSLVEQVVEAITDEIVSGVLTSGSRLIQDDLAQAYGVSRQPVQQALMLLRGCGLVQSAPGRGLIVAPLDPSFV
RDLYEMRAVLEGLAARLAAERAGDRAGREGPAYIAAGHEALKSGLVSRKIETDIAFHRFLSGLSGNPLIDETMAPHWPYL
KRVMSDVLQKEESMSQTVWDEHEDILAAVIEGRSADAERLSREHISRAAGVFIHHLEAQQGDRPRQRRMLSARKMPL

Sequences:

>Translated_237_residues
MRIVSPAPSLVEQVVEAITDEIVSGVLTSGSRLIQDDLAQAYGVSRQPVQQALMLLRGCGLVQSAPGRGLIVAPLDPSFV
RDLYEMRAVLEGLAARLAAERAGDRAGREGPAYIAAGHEALKSGLVSRKIETDIAFHRFLSGLSGNPLIDETMAPHWPYL
KRVMSDVLQKEESMSQTVWDEHEDILAAVIEGRSADAERLSREHISRAAGVFIHHLEAQQGDRPRQRRMLSARKMPL
>Mature_237_residues
MRIVSPAPSLVEQVVEAITDEIVSGVLTSGSRLIQDDLAQAYGVSRQPVQQALMLLRGCGLVQSAPGRGLIVAPLDPSFV
RDLYEMRAVLEGLAARLAAERAGDRAGREGPAYIAAGHEALKSGLVSRKIETDIAFHRFLSGLSGNPLIDETMAPHWPYL
KRVMSDVLQKEESMSQTVWDEHEDILAAVIEGRSADAERLSREHISRAAGVFIHHLEAQQGDRPRQRRMLSARKMPL

Specific function: Activator For The Glycolate Oxidation Locus. [C]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25990; Mature: 25990

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVSPAPSLVEQVVEAITDEIVSGVLTSGSRLIQDDLAQAYGVSRQPVQQALMLLRGCG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
LVQSAPGRGLIVAPLDPSFVRDLYEMRAVLEGLAARLAAERAGDRAGREGPAYIAAGHEA
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LKSGLVSRKIETDIAFHRFLSGLSGNPLIDETMAPHWPYLKRVMSDVLQKEESMSQTVWD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EHEDILAAVIEGRSADAERLSREHISRAAGVFIHHLEAQQGDRPRQRRMLSARKMPL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIVSPAPSLVEQVVEAITDEIVSGVLTSGSRLIQDDLAQAYGVSRQPVQQALMLLRGCG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
LVQSAPGRGLIVAPLDPSFVRDLYEMRAVLEGLAARLAAERAGDRAGREGPAYIAAGHEA
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LKSGLVSRKIETDIAFHRFLSGLSGNPLIDETMAPHWPYLKRVMSDVLQKEESMSQTVWD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EHEDILAAVIEGRSADAERLSREHISRAAGVFIHHLEAQQGDRPRQRRMLSARKMPL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA