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The map label for this gene is bphR [H]

Identifier: 146338770

GI number: 146338770

Start: 1819492

End: 1820214

Strand: Reverse

Name: bphR [H]

Synonym: BRADO1704

Alternate gene names: 146338770

Gene position: 1820214-1819492 (Counterclockwise)

Preceding gene: 146338771

Following gene: 146338769

Centisome position: 24.41

GC content: 67.5

Gene sequence:

>723_bases
ATGAGACATGAGATCCGATTTGCTGCAGGAGGCTCCGTGCCGCCGCTGAAAACACAGCCGAACCTGACCGAACGCGTCTA
CCAGCAGATCCTCTCGGACATCGTCGAAGGCGAACTGCCGGAATCCGCGCGGCTGATCCAGGACGATCTTGCTCGCGACC
TCGGCGTCTCGCGCCAGCCGGTGCAGCAGGCGCTTCTGCTGTTGCGCAATCAGGGCTTTGTCCGCGACGCGCCGGGGCGG
GGCCTGGAAGTCGCGCCGATCGACACCGACTTCATCCGCAACCTCTACGAAATTCGCGCCGTGGCCGAGGGCCTCGCCTG
CCGGCTTGCGGCGAGCCGCGGCGCCGAGCGCGCGGCCGAGCAAGGCCCCAGGCTGATCGCGGAAGGCCGCCGCGCCGAGC
GCGAGCATTCGGTCGAGCAACTGATCGAGGCCGACGTCAAGTTTCACGAGTTTCTCTACCAGGTCTCCGGCAACTCGGTC
ATCCAGGACACGACCCAGCCGCATTGGCTGCATCTACGCCGGCTGATGGGCGAGGTGCTGATGCGCGACGAGACGCCGCG
GCGGATCTGGGATCAGCATGAGGACATCCTGAACGCCGTGATCGCGGGCGATGCGCAGAGGGCCGAGGACCTCGCGCGGC
AGCACATCACGCGAACAGCCACGGTGCTGCTCGCGCGGCTGTCGAAGCAGCGCGACCGCGTGCCGGTCGCGACGCCGTCC
TGA

Upstream 100 bases:

>100_bases
GCGGCGCATGCTCTCGGCACGCAAGATGCCGCTATGAGCAGACGAGCCCGCCCAGCCGAGGCAAGAGTGCAGCGCTCAGG
ATGCCAGCCTCACATGACGG

Downstream 100 bases:

>100_bases
CCGACCGCCGGCGACGTCTCTGTCGCAGCCAGGAACTTTGCCGGCCGCTTGCACGTTCAGGCCGCAGAGAGAGCCCGGCT
CTTTTGTCAGCGTCGGCAAC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRHEIRFAAGGSVPPLKTQPNLTERVYQQILSDIVEGELPESARLIQDDLARDLGVSRQPVQQALLLLRNQGFVRDAPGR
GLEVAPIDTDFIRNLYEIRAVAEGLACRLAASRGAERAAEQGPRLIAEGRRAEREHSVEQLIEADVKFHEFLYQVSGNSV
IQDTTQPHWLHLRRLMGEVLMRDETPRRIWDQHEDILNAVIAGDAQRAEDLARQHITRTATVLLARLSKQRDRVPVATPS

Sequences:

>Translated_240_residues
MRHEIRFAAGGSVPPLKTQPNLTERVYQQILSDIVEGELPESARLIQDDLARDLGVSRQPVQQALLLLRNQGFVRDAPGR
GLEVAPIDTDFIRNLYEIRAVAEGLACRLAASRGAERAAEQGPRLIAEGRRAEREHSVEQLIEADVKFHEFLYQVSGNSV
IQDTTQPHWLHLRRLMGEVLMRDETPRRIWDQHEDILNAVIAGDAQRAEDLARQHITRTATVLLARLSKQRDRVPVATPS
>Mature_240_residues
MRHEIRFAAGGSVPPLKTQPNLTERVYQQILSDIVEGELPESARLIQDDLARDLGVSRQPVQQALLLLRNQGFVRDAPGR
GLEVAPIDTDFIRNLYEIRAVAEGLACRLAASRGAERAAEQGPRLIAEGRRAEREHSVEQLIEADVKFHEFLYQVSGNSV
IQDTTQPHWLHLRRLMGEVLMRDETPRRIWDQHEDILNAVIAGDAQRAEDLARQHITRTATVLLARLSKQRDRVPVATPS

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=205, Percent_Identity=28.2926829268293, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27063; Mature: 27063

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHEIRFAAGGSVPPLKTQPNLTERVYQQILSDIVEGELPESARLIQDDLARDLGVSRQP
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
VQQALLLLRNQGFVRDAPGRGLEVAPIDTDFIRNLYEIRAVAEGLACRLAASRGAERAAE
HHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QGPRLIAEGRRAEREHSVEQLIEADVKFHEFLYQVSGNSVIQDTTQPHWLHLRRLMGEVL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHH
MRDETPRRIWDQHEDILNAVIAGDAQRAEDLARQHITRTATVLLARLSKQRDRVPVATPS
HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRHEIRFAAGGSVPPLKTQPNLTERVYQQILSDIVEGELPESARLIQDDLARDLGVSRQP
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
VQQALLLLRNQGFVRDAPGRGLEVAPIDTDFIRNLYEIRAVAEGLACRLAASRGAERAAE
HHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QGPRLIAEGRRAEREHSVEQLIEADVKFHEFLYQVSGNSVIQDTTQPHWLHLRRLMGEVL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHH
MRDETPRRIWDQHEDILNAVIAGDAQRAEDLARQHITRTATVLLARLSKQRDRVPVATPS
HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]