| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is bchP [H]
Identifier: 146338700
GI number: 146338700
Start: 1747237
End: 1748442
Strand: Reverse
Name: bchP [H]
Synonym: BRADO1632
Alternate gene names: 146338700
Gene position: 1748442-1747237 (Counterclockwise)
Preceding gene: 146338701
Following gene: 146338699
Centisome position: 23.45
GC content: 68.33
Gene sequence:
>1206_bases ATGAGCACCTCGTCCGAGACGTTCGATGTCGTAGTCGTCGGCGGCGGTCCCGCCGGCGCCACCGCCGCCAATGATCTGGC CCGTCAGGGCCATCACGTGCTGCTGCTCGACAAAGCGGGCCGCATCAAGCCATGCGGCGGCGCCATCCCGCCGCGGCTCA TCAGCGAGTTCGAAATTCCCGACCATCTGCTGGTGGCGCGGATTTCCTCGGCGCGCATGGTGTCGCCAAGCAACCGCGAC GTCGACATGCCGATCGACGGCGGCTTCGTCGGCATGGTCGATCGCGAGCATTATGACGAATGGCTGCGGGCCCGCGCGGC CGAGGGCGGCGCGGTCCGCCGCACCGGGACATTCAGCCACATCGCCCGCGATGCCGATGGCACGGCGGTGGTGCATTACG AGCGCCGCATGGATGATGGCAGCGTGCGCGAGGACAGCGTCCGCGCCCGTGCCGTGATCGGCGCCGACGGCGCGGTGTCG GCGGTGGCACGGCAATGCATCCCGGAGGGCGCCGAGATCCGCTACGTGTTCGCCTATCACGAGATCGTCCGCTCGCCGGA GCGTGGCCATCCGCTGTTCGACGCCACGCGCTGCGACGTCGTCTATCGCGGACAACTCTCGCCGGACTTCTACAGCTGGG TCTTCCCGCACGGCGCGACGACCAGCATCGGCACCGGCAGCGCGCATAAGGGATTCTCGCTGCGCGGCTCGGTGGCCCAG TTCCGGAAAGTCGCGGGGCTCGACGATCTCGAGACGATCCGCCGCGAGGGCGCGCCGATCCCGTTGAGGCCGCTGTCGCG CTGGGACAACGGCCGCGACGTCGTGCTCGCCGGTGATGCCGCCGGCGTGGTCGCACCCGCCTCCGGCGAGGGCATCTATT ACGCGATGGCCGGCGGCCGCGCCGCGGCGGATGCCGTCGCGCTGTTCCTCAAGACCGGCGATGCTGCAGCCCTCGCCACC GCCCGCAAGGCTTTCATGCGCAAGCACGGCGCGGTGTTCTTCATCCTCGGCATGATGCAGCGCTACTGGTACACGAACGA CGCCCGCCGCGAGCGTTTCGTCGCCATCTGCCGTGACAAGGACGTCCAGCAGCTGACCTGGGACGCCTACATGAACAAGG AACTGGTGAAGGCGAAGCCGCTGTCGCATGTCCGCATCTTCTTCAAGAACATCGCCCACCTCACCGGACTTGCGAAGGCG GCTTAG
Upstream 100 bases:
>100_bases CACTGTTCGTCCTTTCCGCCTGGCTCGCGATCTGGATCAAGCGCCCACGCGAGCAGACCTCGGCGCTGCAGGCGCAGCCG GCCAATCAGGGAGCCTAGCG
Downstream 100 bases:
>100_bases CAGTTCACGTGATGGATGAGTTGTACCGCAGCCCGCATCTGATCGATGCGATCCTCGCGATCGTAGCGGTGGAATTCGCG GTCATCACCTGGATCTGGCG
Product: geranylgeranyl reductase
Products: NA
Alternate protein names: Geranylgeranyl reductase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSTSSETFDVVVVGGGPAGATAANDLARQGHHVLLLDKAGRIKPCGGAIPPRLISEFEIPDHLLVARISSARMVSPSNRD VDMPIDGGFVGMVDREHYDEWLRARAAEGGAVRRTGTFSHIARDADGTAVVHYERRMDDGSVREDSVRARAVIGADGAVS AVARQCIPEGAEIRYVFAYHEIVRSPERGHPLFDATRCDVVYRGQLSPDFYSWVFPHGATTSIGTGSAHKGFSLRGSVAQ FRKVAGLDDLETIRREGAPIPLRPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAADAVALFLKTGDAAALAT ARKAFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDKDVQQLTWDAYMNKELVKAKPLSHVRIFFKNIAHLTGLAKA A
Sequences:
>Translated_401_residues MSTSSETFDVVVVGGGPAGATAANDLARQGHHVLLLDKAGRIKPCGGAIPPRLISEFEIPDHLLVARISSARMVSPSNRD VDMPIDGGFVGMVDREHYDEWLRARAAEGGAVRRTGTFSHIARDADGTAVVHYERRMDDGSVREDSVRARAVIGADGAVS AVARQCIPEGAEIRYVFAYHEIVRSPERGHPLFDATRCDVVYRGQLSPDFYSWVFPHGATTSIGTGSAHKGFSLRGSVAQ FRKVAGLDDLETIRREGAPIPLRPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAADAVALFLKTGDAAALAT ARKAFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDKDVQQLTWDAYMNKELVKAKPLSHVRIFFKNIAHLTGLAKA A >Mature_400_residues STSSETFDVVVVGGGPAGATAANDLARQGHHVLLLDKAGRIKPCGGAIPPRLISEFEIPDHLLVARISSARMVSPSNRDV DMPIDGGFVGMVDREHYDEWLRARAAEGGAVRRTGTFSHIARDADGTAVVHYERRMDDGSVREDSVRARAVIGADGAVSA VARQCIPEGAEIRYVFAYHEIVRSPERGHPLFDATRCDVVYRGQLSPDFYSWVFPHGATTSIGTGSAHKGFSLRGSVAQF RKVAGLDDLETIRREGAPIPLRPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGRAAADAVALFLKTGDAAALATA RKAFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDKDVQQLTWDAYMNKELVKAKPLSHVRIFFKNIAHLTGLAKAA
Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during bacteriochlorophyll A (BchlA) biosynthesis [H]
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082319, Length=314, Percent_Identity=29.6178343949045, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010253 - InterPro: IPR013027 - InterPro: IPR011777 - InterPro: IPR003042 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: =1.3.1.83 [H]
Molecular weight: Translated: 43535; Mature: 43404
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSETFDVVVVGGGPAGATAANDLARQGHHVLLLDKAGRIKPCGGAIPPRLISEFEIP CCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC DHLLVARISSARMVSPSNRDVDMPIDGGFVGMVDREHYDEWLRARAAEGGAVRRTGTFSH CHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEECCCHHH IARDADGTAVVHYERRMDDGSVREDSVRARAVIGADGAVSAVARQCIPEGAEIRYVFAYH HHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEH EIVRSPERGHPLFDATRCDVVYRGQLSPDFYSWVFPHGATTSIGTGSAHKGFSLRGSVAQ HHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCHHHH FRKVAGLDDLETIRREGAPIPLRPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGR HHHHCCCCHHHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCCEEECCCCCEEEEEECCCC AAADAVALFLKTGDAAALATARKAFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDK HHHHHEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHEEEEECCC DVQQLTWDAYMNKELVKAKPLSHVRIFFKNIAHLTGLAKAA CHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STSSETFDVVVVGGGPAGATAANDLARQGHHVLLLDKAGRIKPCGGAIPPRLISEFEIP CCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC DHLLVARISSARMVSPSNRDVDMPIDGGFVGMVDREHYDEWLRARAAEGGAVRRTGTFSH CHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEECCCHHH IARDADGTAVVHYERRMDDGSVREDSVRARAVIGADGAVSAVARQCIPEGAEIRYVFAYH HHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEH EIVRSPERGHPLFDATRCDVVYRGQLSPDFYSWVFPHGATTSIGTGSAHKGFSLRGSVAQ HHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCHHHH FRKVAGLDDLETIRREGAPIPLRPLSRWDNGRDVVLAGDAAGVVAPASGEGIYYAMAGGR HHHHCCCCHHHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCCEEECCCCCEEEEEECCCC AAADAVALFLKTGDAAALATARKAFMRKHGAVFFILGMMQRYWYTNDARRERFVAICRDK HHHHHEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHEEEEECCC DVQQLTWDAYMNKELVKAKPLSHVRIFFKNIAHLTGLAKAA CHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA