| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338701
Identifier: 146338701
GI number: 146338701
Start: 1748445
End: 1749776
Strand: Reverse
Name: 146338701
Synonym: BRADO1633
Alternate gene names: NA
Gene position: 1749776-1748445 (Counterclockwise)
Preceding gene: 146338702
Following gene: 146338700
Centisome position: 23.47
GC content: 69.59
Gene sequence:
>1332_bases ATGACGACGGCCTCTGCTCCGCTCTCCTGGTTCGGCATCGTCAGGCTCGGCCTGGTGCAGACCGCGCTCGGCGCCGTCGT GGTGCTGACGACCTCGACCTTGAACCGCGTGATGGTGATCGAGCTGGCGCTGCCGGCGATGATCCCTGGCCTTCTGGTCG CGATGCACTATGCGATGCAGGTGCTCAGGCCCTGGCTCGGCCACGGCTCCGATGTCGGCGGGCGACGCTTCGCCTGGATC GTCGGCGGCATGGCCGCGCTTGCCGCGGGCGGCCTGCTCGCGGCGGTCGCCACCGCGTTGATGGCGAGCCAGCTGGTGCT CGGCCTCGTGGTCGCGGTGATCGCCTTCATCATGATCGGCATCGGCGTCGGCGCCGCCGGCACCTCGCTCTTGGTGCTGC TCGCCAAGCGCACCGCGCCGCAGCGGCGCAGCGCCGCCGCCTCGATCGCCTGGATCATGATGATCGCCGGCTTCATCGTC ACGACCGCGGTCGCCGGCAAAGCGCTCGATCCGTTCTCCGGCGAGCGGCTGATGCTGGTGTCCGGCACGGTGTCGGCGAT CGCCATGATGCTGACCTTGATCGGCGTCTGGGGCATCGAGCAGCCGGAGCTGTCCGTCGAACGGGCCGCGGCGACCGCCG AGCGCGGCGGCTTCATGGAGGACTTCCGCGAGATCTGCCGCGAGCCGCAGGCGCGGCGCTTCGCGATCTTCATCTTCGTC TCGATGCTGGCCTACAGCGCCCAGGACCTGATTCTCGAGCCGTTCGCCGGCAGCGTGTTCAGCATGACTCCGGGCCAGAC CACGCAGCTCTCCTCGGTGCAGCACATGGGCGCGCTGATCGGCATGATCCTGATGCCGGCAATGGCCAGCCTGCATGCCG ACTGGCGCACCAAGCCGCAGCCCTGGATCATCGGCGGCTGCCTTGCCTCCGCACTGGCCCTTCTCAGCCTCGTCGCCGCC GCCACAGTCGGCCCGGCCTGGCCACTGCGCGGCTCGGTGCTGCTGCTCGGCATCACCAACGGCGTCTATGCCATCGCGGC GATCGGCGCGATGATGAACATGGTCAGCGAAGGCCGCGACAATCGCGAGGGAACGCGGATGGGCCTGTGGGGCGCGTCGC AGGCAATCTCGTTCGGCATCGGAGGCTTCGTCGGCACCGCGGCGGCGGATGCTGCGCGGGCCTTCATGCCCACGACCGCC TCCGCCTATGCGGCGGTGTTCGCCGCCGAGGCAGCACTGTTCGTCCTTTCCGCCTGGCTCGCGATCTGGATCAAGCGCCC ACGCGAGCAGACCTCGGCGCTGCAGGCGCAGCCGGCCAATCAGGGAGCCTAG
Upstream 100 bases:
>100_bases CGAATCCGCGCGAGCTCGCGCCCTGGTACAACGGGACCGGCGTGCTGCTCTATGTGCTGGGCATGCTGGCGTCGGCCTTC GCGCTGGCGGGGATGGCGGC
Downstream 100 bases:
>100_bases CGATGAGCACCTCGTCCGAGACGTTCGATGTCGTAGTCGTCGGCGGCGGTCCCGCCGGCGCCACCGCCGCCAATGATCTG GCCCGTCAGGGCCATCACGT
Product: light harvesting pigment major facilitator family (MFS) transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MTTASAPLSWFGIVRLGLVQTALGAVVVLTTSTLNRVMVIELALPAMIPGLLVAMHYAMQVLRPWLGHGSDVGGRRFAWI VGGMAALAAGGLLAAVATALMASQLVLGLVVAVIAFIMIGIGVGAAGTSLLVLLAKRTAPQRRSAAASIAWIMMIAGFIV TTAVAGKALDPFSGERLMLVSGTVSAIAMMLTLIGVWGIEQPELSVERAAATAERGGFMEDFREICREPQARRFAIFIFV SMLAYSAQDLILEPFAGSVFSMTPGQTTQLSSVQHMGALIGMILMPAMASLHADWRTKPQPWIIGGCLASALALLSLVAA ATVGPAWPLRGSVLLLGITNGVYAIAAIGAMMNMVSEGRDNREGTRMGLWGASQAISFGIGGFVGTAAADAARAFMPTTA SAYAAVFAAEAALFVLSAWLAIWIKRPREQTSALQAQPANQGA
Sequences:
>Translated_443_residues MTTASAPLSWFGIVRLGLVQTALGAVVVLTTSTLNRVMVIELALPAMIPGLLVAMHYAMQVLRPWLGHGSDVGGRRFAWI VGGMAALAAGGLLAAVATALMASQLVLGLVVAVIAFIMIGIGVGAAGTSLLVLLAKRTAPQRRSAAASIAWIMMIAGFIV TTAVAGKALDPFSGERLMLVSGTVSAIAMMLTLIGVWGIEQPELSVERAAATAERGGFMEDFREICREPQARRFAIFIFV SMLAYSAQDLILEPFAGSVFSMTPGQTTQLSSVQHMGALIGMILMPAMASLHADWRTKPQPWIIGGCLASALALLSLVAA ATVGPAWPLRGSVLLLGITNGVYAIAAIGAMMNMVSEGRDNREGTRMGLWGASQAISFGIGGFVGTAAADAARAFMPTTA SAYAAVFAAEAALFVLSAWLAIWIKRPREQTSALQAQPANQGA >Mature_442_residues TTASAPLSWFGIVRLGLVQTALGAVVVLTTSTLNRVMVIELALPAMIPGLLVAMHYAMQVLRPWLGHGSDVGGRRFAWIV GGMAALAAGGLLAAVATALMASQLVLGLVVAVIAFIMIGIGVGAAGTSLLVLLAKRTAPQRRSAAASIAWIMMIAGFIVT TAVAGKALDPFSGERLMLVSGTVSAIAMMLTLIGVWGIEQPELSVERAAATAERGGFMEDFREICREPQARRFAIFIFVS MLAYSAQDLILEPFAGSVFSMTPGQTTQLSSVQHMGALIGMILMPAMASLHADWRTKPQPWIIGGCLASALALLSLVAAA TVGPAWPLRGSVLLLGITNGVYAIAAIGAMMNMVSEGRDNREGTRMGLWGASQAISFGIGGFVGTAAADAARAFMPTTAS AYAAVFAAEAALFVLSAWLAIWIKRPREQTSALQAQPANQGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004896 [H]
Pfam domain/function: PF03209 PUCC [H]
EC number: NA
Molecular weight: Translated: 46085; Mature: 45954
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00011 GLA_1 ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTASAPLSWFGIVRLGLVQTALGAVVVLTTSTLNRVMVIELALPAMIPGLLVAMHYAMQ CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH VLRPWLGHGSDVGGRRFAWIVGGMAALAAGGLLAAVATALMASQLVLGLVVAVIAFIMIG HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVGAAGTSLLVLLAKRTAPQRRSAAASIAWIMMIAGFIVTTAVAGKALDPFSGERLMLV HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE SGTVSAIAMMLTLIGVWGIEQPELSVERAAATAERGGFMEDFREICREPQARRFAIFIFV CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH SMLAYSAQDLILEPFAGSVFSMTPGQTTQLSSVQHMGALIGMILMPAMASLHADWRTKPQ HHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PWIIGGCLASALALLSLVAAATVGPAWPLRGSVLLLGITNGVYAIAAIGAMMNMVSEGRD CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC NREGTRMGLWGASQAISFGIGGFVGTAAADAARAFMPTTASAYAAVFAAEAALFVLSAWL CCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AIWIKRPREQTSALQAQPANQGA HHHHHCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TTASAPLSWFGIVRLGLVQTALGAVVVLTTSTLNRVMVIELALPAMIPGLLVAMHYAMQ CCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH VLRPWLGHGSDVGGRRFAWIVGGMAALAAGGLLAAVATALMASQLVLGLVVAVIAFIMIG HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVGAAGTSLLVLLAKRTAPQRRSAAASIAWIMMIAGFIVTTAVAGKALDPFSGERLMLV HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE SGTVSAIAMMLTLIGVWGIEQPELSVERAAATAERGGFMEDFREICREPQARRFAIFIFV CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH SMLAYSAQDLILEPFAGSVFSMTPGQTTQLSSVQHMGALIGMILMPAMASLHADWRTKPQ HHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PWIIGGCLASALALLSLVAAATVGPAWPLRGSVLLLGITNGVYAIAAIGAMMNMVSEGRD CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC NREGTRMGLWGASQAISFGIGGFVGTAAADAARAFMPTTASAYAAVFAAEAALFVLSAWL CCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AIWIKRPREQTSALQAQPANQGA HHHHHCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA