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The map label for this gene is yddA [C]

Identifier: 146338643

GI number: 146338643

Start: 1687007

End: 1688185

Strand: Direct

Name: yddA [C]

Synonym: BRADO1574

Alternate gene names: 146338643

Gene position: 1687007-1688185 (Clockwise)

Preceding gene: 146338641

Following gene: 146338647

Centisome position: 22.62

GC content: 65.56

Gene sequence:

>1179_bases
ATGAGCAAAGTTCCCCAGCCATTCGCCGAGCCAGGCGACCTCCGCTCTGCCGGCCCTGCCGAGGACGACAATGAGGATGG
CGATCTGCAATGGTCGCGGTTCTGGCTGACGGCGCGGGGCTTCTGGCGGGGAGCGAAGGCGTGGCGGGTCTGGCTGCTGT
GCGCCGTGCTGGTCGGCATCGTCGCGCTGCAACTTTATGTCCAGTTGCGCTTCAACACCTGGACCCGGGATTTCTTCAAT
GCGCTCGAGGGACGCGATCCGGCGCGGCTGCGTCAGCAGGCCATGCTGCTCGTGCCGCTATGTGCGGCAAGCGTCGTGCT
GGCGATCGCCTCGGTCTGGGGCCGCATGACCATTCAACGCAATTGGCGGCAATGGCTGGCGGCGGAGGTGATCGACTACT
GGATCGAGAACGACCGCTATGCGCGGCTCGCGACCACCAAGGGGGACCAGAAGATTCCCGAATACCGCATCGCCGAGGAC
GTCCGCATCGCCACCGATGCGCCGGTCGACTTCGCCGTCAACGTGGTCTCGTCGCTGCTGACGGCGGTGATCTTCCTGCA
GGTGCTATGGCAGGTCGGCGGTCCGATCAGCTTTGCGATCTCCGGCCTTGAGTTGTGGTTGCCCGGCTACCTGGTCATCA
GCGTCGTCGCCTATTCAGGCCTCGTCACCGGCGCGATGCTGTGGGTCGGTGCGCCGCTTACCCACGTCATCCAGGTCAAG
AACCAGTCCGAGTCGGAGCTGATCACGGCCGCGCATCGGCTGCGCGACATCGGCGAGGGCGTGACGCCGAAAGAGGACAA
ACGTGGCGTGATTGCCGCGCTGTGGCAGGCGCTCGACCGCGTCATCCGGCAATGGCGGCGGCTGTGCTGGCGGCTGATGC
GCATGACGCTGGTGTCGCATACCAACAGCCTGCTCGCGCCGATCATCGGACTCGTGCTGTGCGCGCCAAAATTCCTCGAC
GGCCAGATGACGCTCGGCGAGCTGACGCAGGCGGCGGCGGCGTTCACGCTGGTGCAGGGCGCGTTCAACTGGCTGGTCGA
CAATTACAGCCGCGTCGCCGACTGGATGTCGTCGCTGGAGCGCGTCGGCGGATTGCTGCTGTCGCTCGATGAGCTGAATG
ACGATGGCGTCGAGACGGTCACGCCGTCTGCAGCCGCACGTGAGCCAGCAGACGGTTGA

Upstream 100 bases:

>100_bases
TCTCCCGCATCGCAGCGCGAGAGCCGAGTTTGCCGCGCCGGACGGCAGCCGGCTTGCGCAAGATCAAGCGGGGCATGTGC
GTGGCTCCTTAGATGCGCTC

Downstream 100 bases:

>100_bases
TATCAGCCGGGTCGCACAGCGCCGTGCCCGTGCGCAGCAGTGCGGCCGCGCCGGCGGCGACGGCGAAGCGGAACGCCTCG
TCCATGGGCTCACCGGCGGC

Product: putative ABC transporter-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSKVPQPFAEPGDLRSAGPAEDDNEDGDLQWSRFWLTARGFWRGAKAWRVWLLCAVLVGIVALQLYVQLRFNTWTRDFFN
ALEGRDPARLRQQAMLLVPLCAASVVLAIASVWGRMTIQRNWRQWLAAEVIDYWIENDRYARLATTKGDQKIPEYRIAED
VRIATDAPVDFAVNVVSSLLTAVIFLQVLWQVGGPISFAISGLELWLPGYLVISVVAYSGLVTGAMLWVGAPLTHVIQVK
NQSESELITAAHRLRDIGEGVTPKEDKRGVIAALWQALDRVIRQWRRLCWRLMRMTLVSHTNSLLAPIIGLVLCAPKFLD
GQMTLGELTQAAAAFTLVQGAFNWLVDNYSRVADWMSSLERVGGLLLSLDELNDDGVETVTPSAAAREPADG

Sequences:

>Translated_392_residues
MSKVPQPFAEPGDLRSAGPAEDDNEDGDLQWSRFWLTARGFWRGAKAWRVWLLCAVLVGIVALQLYVQLRFNTWTRDFFN
ALEGRDPARLRQQAMLLVPLCAASVVLAIASVWGRMTIQRNWRQWLAAEVIDYWIENDRYARLATTKGDQKIPEYRIAED
VRIATDAPVDFAVNVVSSLLTAVIFLQVLWQVGGPISFAISGLELWLPGYLVISVVAYSGLVTGAMLWVGAPLTHVIQVK
NQSESELITAAHRLRDIGEGVTPKEDKRGVIAALWQALDRVIRQWRRLCWRLMRMTLVSHTNSLLAPIIGLVLCAPKFLD
GQMTLGELTQAAAAFTLVQGAFNWLVDNYSRVADWMSSLERVGGLLLSLDELNDDGVETVTPSAAAREPADG
>Mature_391_residues
SKVPQPFAEPGDLRSAGPAEDDNEDGDLQWSRFWLTARGFWRGAKAWRVWLLCAVLVGIVALQLYVQLRFNTWTRDFFNA
LEGRDPARLRQQAMLLVPLCAASVVLAIASVWGRMTIQRNWRQWLAAEVIDYWIENDRYARLATTKGDQKIPEYRIAEDV
RIATDAPVDFAVNVVSSLLTAVIFLQVLWQVGGPISFAISGLELWLPGYLVISVVAYSGLVTGAMLWVGAPLTHVIQVKN
QSESELITAAHRLRDIGEGVTPKEDKRGVIAALWQALDRVIRQWRRLCWRLMRMTLVSHTNSLLAPIIGLVLCAPKFLDG
QMTLGELTQAAAAFTLVQGAFNWLVDNYSRVADWMSSLERVGGLLLSLDELNDDGVETVTPSAAAREPADG

Specific function: Unknown

COG id: COG4178

COG function: function code R; ABC-type uncharacterized transport system, permease and ATPase components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787772, Length=309, Percent_Identity=24.2718446601942, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1786575, Length=344, Percent_Identity=22.6744186046512, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010509
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF06472 ABC_membrane_2; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 43671; Mature: 43540

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVPQPFAEPGDLRSAGPAEDDNEDGDLQWSRFWLTARGFWRGAKAWRVWLLCAVLVGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEHHHHHCCHHHHHHHHHHHHHHHH
VALQLYVQLRFNTWTRDFFNALEGRDPARLRQQAMLLVPLCAASVVLAIASVWGRMTIQR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NWRQWLAAEVIDYWIENDRYARLATTKGDQKIPEYRIAEDVRIATDAPVDFAVNVVSSLL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEECCCCCHHHHHHHHHHHH
TAVIFLQVLWQVGGPISFAISGLELWLPGYLVISVVAYSGLVTGAMLWVGAPLTHVIQVK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
NQSESELITAAHRLRDIGEGVTPKEDKRGVIAALWQALDRVIRQWRRLCWRLMRMTLVSH
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNSLLAPIIGLVLCAPKFLDGQMTLGELTQAAAAFTLVQGAFNWLVDNYSRVADWMSSLE
HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGGLLLSLDELNDDGVETVTPSAAAREPADG
HHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
SKVPQPFAEPGDLRSAGPAEDDNEDGDLQWSRFWLTARGFWRGAKAWRVWLLCAVLVGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEHHHHHCCHHHHHHHHHHHHHHHH
VALQLYVQLRFNTWTRDFFNALEGRDPARLRQQAMLLVPLCAASVVLAIASVWGRMTIQR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NWRQWLAAEVIDYWIENDRYARLATTKGDQKIPEYRIAEDVRIATDAPVDFAVNVVSSLL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEECCCCCHHHHHHHHHHHH
TAVIFLQVLWQVGGPISFAISGLELWLPGYLVISVVAYSGLVTGAMLWVGAPLTHVIQVK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
NQSESELITAAHRLRDIGEGVTPKEDKRGVIAALWQALDRVIRQWRRLCWRLMRMTLVSH
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNSLLAPIIGLVLCAPKFLDGQMTLGELTQAAAAFTLVQGAFNWLVDNYSRVADWMSSLE
HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGGLLLSLDELNDDGVETVTPSAAAREPADG
HHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]