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The map label for this gene is yliC [C]

Identifier: 146338647

GI number: 146338647

Start: 1691800

End: 1692750

Strand: Direct

Name: yliC [C]

Synonym: BRADO1578

Alternate gene names: 146338647

Gene position: 1691800-1692750 (Clockwise)

Preceding gene: 146338643

Following gene: 146338648

Centisome position: 22.69

GC content: 66.46

Gene sequence:

>951_bases
ATGAGCGTGTTTCTGCTGCGGCGATGCCTGACCTTGCTTGCGACCCTGGTCGGGGCCTCGCTGATCATTTTCCTGGTGCT
CGATGCCCTGCCGGGCAACGCGGCGCAGATGCTGATGGGCGCCGACGCCTCGCCCGACGCGGTGAGGGCGCTGACCATCA
AGCTCGGGCTCGATCAGCCGCTGGCGGTGCGCTATGTGCAGTGGCTCGGCGGCCTGCTCACGGGCCATCTCGGCAACAGC
TATGCCTATGGCACGCCGGTGGCGGAGCTGATCGGCGAGCGCCTGGCGATGACGATTCCCCTGGCGATCATGGCCATGCT
GCTGACGACGGTGCTGGCGCTCGCGGCCGGCATCTACACGGCGGCCCATCACAACCGCATTGGCGATGTCGGCGTGATGT
CGCTGACCCAGATCGGCATCGCGCTGCCGAACTTCTGGTTCGCCATTCTCCTGATCCTGCTGTTCGCGGTGAAGCTGCAA
TGGCTGTCGGCCGGTGGCTTCCCCGGCTGGGAGGACGGCATCTGGCCCGGGCTGCGCGCGCTGCTGCTGCCGGCGGTGGC
GCTGGCGGTGGTGCAGGCCGCGATCCTGGCGCGGGTGACGCGCTCCGCCGTGCTCGACGTGCTGCGCGAGGACTTCGTGC
GCACGGCGCGCGCCAAGGGCCTGACCAAACGCGAGGTGCTGTGGCAGCACGTGCTGCGCAACGCGATGATCCCGGTGCTC
ACCGTGATGGGCTTGCAATTTGCCAATCTGCTCGCCGGCACGATCGTGATCGAGAACGTGTTCTATCTGCCCGGGCTCGG
CCGCCTCATTTTCCAGTCGATCGCCAACCGCGATCTCATCGTCGTCCGCAACTGCGTGATGCTGCTGGCCGCCATGGTGA
TCATCGTCAACTTCGTGGTCGACGTGCTCTATGCGGTCATCGATCCGCGCATCAAGGTGCACGAGCTGTGA

Upstream 100 bases:

>100_bases
AGTCCTGCGCCGGCGAGGGGGGATCATGCAGGCAACGGGCTTGCATCCCGGGTCAAAGCTGTAGAACGTGCGGCCGCCGA
GAAATGGAGTTTCGGCTCGA

Downstream 100 bases:

>100_bases
GTTCGTCCGTGATCGTCCAGCCCGTTGTCGCGCCTGCGACGAACACGTTCTGGCGCCGCGCGCTGCGCCATCGCAGCTTT
ACGGTCGGTGCGCTGCTCTG

Product: putative oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSVFLLRRCLTLLATLVGASLIIFLVLDALPGNAAQMLMGADASPDAVRALTIKLGLDQPLAVRYVQWLGGLLTGHLGNS
YAYGTPVAELIGERLAMTIPLAIMAMLLTTVLALAAGIYTAAHHNRIGDVGVMSLTQIGIALPNFWFAILLILLFAVKLQ
WLSAGGFPGWEDGIWPGLRALLLPAVALAVVQAAILARVTRSAVLDVLREDFVRTARAKGLTKREVLWQHVLRNAMIPVL
TVMGLQFANLLAGTIVIENVFYLPGLGRLIFQSIANRDLIVVRNCVMLLAAMVIIVNFVVDVLYAVIDPRIKVHEL

Sequences:

>Translated_316_residues
MSVFLLRRCLTLLATLVGASLIIFLVLDALPGNAAQMLMGADASPDAVRALTIKLGLDQPLAVRYVQWLGGLLTGHLGNS
YAYGTPVAELIGERLAMTIPLAIMAMLLTTVLALAAGIYTAAHHNRIGDVGVMSLTQIGIALPNFWFAILLILLFAVKLQ
WLSAGGFPGWEDGIWPGLRALLLPAVALAVVQAAILARVTRSAVLDVLREDFVRTARAKGLTKREVLWQHVLRNAMIPVL
TVMGLQFANLLAGTIVIENVFYLPGLGRLIFQSIANRDLIVVRNCVMLLAAMVIIVNFVVDVLYAVIDPRIKVHEL
>Mature_315_residues
SVFLLRRCLTLLATLVGASLIIFLVLDALPGNAAQMLMGADASPDAVRALTIKLGLDQPLAVRYVQWLGGLLTGHLGNSY
AYGTPVAELIGERLAMTIPLAIMAMLLTTVLALAAGIYTAAHHNRIGDVGVMSLTQIGIALPNFWFAILLILLFAVKLQW
LSAGGFPGWEDGIWPGLRALLLPAVALAVVQAAILARVTRSAVLDVLREDFVRTARAKGLTKREVLWQHVLRNAMIPVLT
VMGLQFANLLAGTIVIENVFYLPGLGRLIFQSIANRDLIVVRNCVMLLAAMVIIVNFVVDVLYAVIDPRIKVHEL

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=309, Percent_Identity=40.453074433657, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=37.1428571428571, Blast_Score=207, Evalue=6e-55,
Organism=Escherichia coli, GI1789965, Length=333, Percent_Identity=35.7357357357357, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1787497, Length=311, Percent_Identity=36.9774919614148, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787761, Length=330, Percent_Identity=36.6666666666667, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788504, Length=285, Percent_Identity=30.8771929824561, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=29.1044776119403, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34184; Mature: 34053

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFLLRRCLTLLATLVGASLIIFLVLDALPGNAAQMLMGADASPDAVRALTIKLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHEEEEECCCCH
LAVRYVQWLGGLLTGHLGNSYAYGTPVAELIGERLAMTIPLAIMAMLLTTVLALAAGIYT
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHHNRIGDVGVMSLTQIGIALPNFWFAILLILLFAVKLQWLSAGGFPGWEDGIWPGLRA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LLLPAVALAVVQAAILARVTRSAVLDVLREDFVRTARAKGLTKREVLWQHVLRNAMIPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TVMGLQFANLLAGTIVIENVFYLPGLGRLIFQSIANRDLIVVRNCVMLLAAMVIIVNFVV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DVLYAVIDPRIKVHEL
HHHHHHHCCCCEECCC
>Mature Secondary Structure 
SVFLLRRCLTLLATLVGASLIIFLVLDALPGNAAQMLMGADASPDAVRALTIKLGLDQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHEEEEECCCCH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HHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]