Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338594
Identifier: 146338594
GI number: 146338594
Start: 1625993
End: 1627405
Strand: Reverse
Name: 146338594
Synonym: BRADO1521
Alternate gene names: NA
Gene position: 1627405-1625993 (Counterclockwise)
Preceding gene: 146338595
Following gene: 146338593
Centisome position: 21.83
GC content: 71.05
Gene sequence:
>1413_bases ATGAAGGTGATCATCAGGCTCGCGGCTCTGGTGGCCGCAACGGCGCTCGCAGGCTGCGCCTCGTTCTCGCCCGACAGCGG CATGAGCGTCGTCGCCGACATCACCGGTGGCGCGATCGGCAAGGAGGTCGCCTCGGTCAGAACCGATGAGGATGCGGGCC GCCTGCGCGACGCCACGCGAAAACTGCTGGCGCGGCCGCTGTCGGCGGACGCCGCGGTGCAGGTCGCGCTGTTCAACAAC AAGGGTCTGCAGGCGGCCTATCATCAGCTGGCGCTGAGCGAGGCGGATGCCGTCGCGGCCAGCCTGCCACCGAACCCGAC CGTCTCGCTGATGCGCATCAGCGGTGACGGTGCGTTCGAGGCCGAGCGCCAGGTCGCTGGCGACATCCTGGCGCTCGCCA CCTTGCCGCTGCGCTCGGAGGTCGCGCGCGAGCGCTTCCGGCAGGCGCAGCTCAGGGCGGCGCTCGCGACCGTGCGCCTC GCGGCAGAGGTGCGCCGCGCGCATGTCCGCGTGGTCGCCGCCCATGAGTTGGTCGCGCTGCTGCTCGAAGCGCAGTCCGC CGCGGAGGCGACGGCCAAGCTCGCCGCAAAGCTCGGCGAGACCGGCGCGCTCAACCGGCTTGACCAGGCCCGCGAGCAGG TGTTCTACGCCGAAACCACCGCCGAGCTCGCCGGCGCCCGCCGCGTCGCCTCGAGCGCACGCGAGCGGCTGATCCGGCTG ATGGGCCTGTGGGGCGACGACGCGAACTTCCGCCTGCCCAACCGTCTTCCCATGCTGCCGCGCCGGCCGCTGACGGAGCC CTTCATCGAGCGTGACGCCGTCGCGCACCGCATCGATCTGCAGATCGCGCGCCGGGAGCTGACGGCGCTCGCAACCGCGT TGCAGCTCACCGAGGCGACGCGCTTCGTCAGCCTGCTCGACCTCGCCGGCATCGATCGCAAGACCGGCGAGCCGGAAGGC CGCGTCATCCGCGAGCGCGGCTATGATGTGCAGTTCCAGATCCCGATCTTCGACGGCGGCGAGGTGCGCGTCAGGCAGGC GGCGGAGAGCTACAACATCGCCTTCAACCGCCTCGCAGAGCGTGCGGTCACGGTCCGATCGGAAGCGCGCGACGCCTATC GCAGCTATCGTGCAGCCTACGACATCGCCGGCCATTACGCCCGCGAGGTGCTGCCGCTGCGCCAGATCATCAGCGAGGAG ATGCAGCTGCGCTATTCCAGCATGCAGGTCGATATCTTCGCGCTGCTGCTCGAGGCGCGCCAGCGCCTCGCCTCGCGCCG CGCCGCGATCGACGCGATCAGGGACTTCTTCCTCGCCGAGGCCGAGCTGTCGGCCGCCGTCAATGGCGGCGTCGCGGCCG GTGAGGACCCGGCGCCGCAGACCGCGCGCGCGCTCGCGCCGAACAACGACTGA
Upstream 100 bases:
>100_bases CTGTGAGAACATCCGCGGTCGTCACGCCCTACACGCCGCTGCGTCCAACGACCCCTGCGGCGTGGGGACCGCGCTCCGAA CCGAGCCGCTAGGAGCCGCC
Downstream 100 bases:
>100_bases CACGCAACGATTGACAGGAGAGCATGCATGTTGTCACGCCGAACCCTGCTCGGCTCCGCGGCGCTGGCCGGCGCCTCCGC CGTATCCGGCCGCGTCCAGG
Product: putative Outer membrane efflux protein copper resistance protein B
Products: NA
Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; Outer Membrane Efflux Protein Involved In Copper Resistance; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Efflux Protein
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKVIIRLAALVAATALAGCASFSPDSGMSVVADITGGAIGKEVASVRTDEDAGRLRDATRKLLARPLSADAAVQVALFNN KGLQAAYHQLALSEADAVAASLPPNPTVSLMRISGDGAFEAERQVAGDILALATLPLRSEVARERFRQAQLRAALATVRL AAEVRRAHVRVVAAHELVALLLEAQSAAEATAKLAAKLGETGALNRLDQAREQVFYAETTAELAGARRVASSARERLIRL MGLWGDDANFRLPNRLPMLPRRPLTEPFIERDAVAHRIDLQIARRELTALATALQLTEATRFVSLLDLAGIDRKTGEPEG RVIRERGYDVQFQIPIFDGGEVRVRQAAESYNIAFNRLAERAVTVRSEARDAYRSYRAAYDIAGHYAREVLPLRQIISEE MQLRYSSMQVDIFALLLEARQRLASRRAAIDAIRDFFLAEAELSAAVNGGVAAGEDPAPQTARALAPNND
Sequences:
>Translated_470_residues MKVIIRLAALVAATALAGCASFSPDSGMSVVADITGGAIGKEVASVRTDEDAGRLRDATRKLLARPLSADAAVQVALFNN KGLQAAYHQLALSEADAVAASLPPNPTVSLMRISGDGAFEAERQVAGDILALATLPLRSEVARERFRQAQLRAALATVRL AAEVRRAHVRVVAAHELVALLLEAQSAAEATAKLAAKLGETGALNRLDQAREQVFYAETTAELAGARRVASSARERLIRL MGLWGDDANFRLPNRLPMLPRRPLTEPFIERDAVAHRIDLQIARRELTALATALQLTEATRFVSLLDLAGIDRKTGEPEG RVIRERGYDVQFQIPIFDGGEVRVRQAAESYNIAFNRLAERAVTVRSEARDAYRSYRAAYDIAGHYAREVLPLRQIISEE MQLRYSSMQVDIFALLLEARQRLASRRAAIDAIRDFFLAEAELSAAVNGGVAAGEDPAPQTARALAPNND >Mature_470_residues MKVIIRLAALVAATALAGCASFSPDSGMSVVADITGGAIGKEVASVRTDEDAGRLRDATRKLLARPLSADAAVQVALFNN KGLQAAYHQLALSEADAVAASLPPNPTVSLMRISGDGAFEAERQVAGDILALATLPLRSEVARERFRQAQLRAALATVRL AAEVRRAHVRVVAAHELVALLLEAQSAAEATAKLAAKLGETGALNRLDQAREQVFYAETTAELAGARRVASSARERLIRL MGLWGDDANFRLPNRLPMLPRRPLTEPFIERDAVAHRIDLQIARRELTALATALQLTEATRFVSLLDLAGIDRKTGEPEG RVIRERGYDVQFQIPIFDGGEVRVRQAAESYNIAFNRLAERAVTVRSEARDAYRSYRAAYDIAGHYAREVLPLRQIISEE MQLRYSSMQVDIFALLLEARQRLASRRAAIDAIRDFFLAEAELSAAVNGGVAAGEDPAPQTARALAPNND
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50971; Mature: 50971
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIIRLAALVAATALAGCASFSPDSGMSVVADITGGAIGKEVASVRTDEDAGRLRDATR CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHH KLLARPLSADAAVQVALFNNKGLQAAYHQLALSEADAVAASLPPNPTVSLMRISGDGAFE HHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCH AERQVAGDILALATLPLRSEVARERFRQAQLRAALATVRLAAEVRRAHVRVVAAHELVAL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEAQSAAEATAKLAAKLGETGALNRLDQAREQVFYAETTAELAGARRVASSARERLIRL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGLWGDDANFRLPNRLPMLPRRPLTEPFIERDAVAHRIDLQIARRELTALATALQLTEAT HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFVSLLDLAGIDRKTGEPEGRVIRERGYDVQFQIPIFDGGEVRVRQAAESYNIAFNRLAE HHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH RAVTVRSEARDAYRSYRAAYDIAGHYAREVLPLRQIISEEMQLRYSSMQVDIFALLLEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLASRRAAIDAIRDFFLAEAELSAAVNGGVAAGEDPAPQTARALAPNND HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MKVIIRLAALVAATALAGCASFSPDSGMSVVADITGGAIGKEVASVRTDEDAGRLRDATR CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHH KLLARPLSADAAVQVALFNNKGLQAAYHQLALSEADAVAASLPPNPTVSLMRISGDGAFE HHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCH AERQVAGDILALATLPLRSEVARERFRQAQLRAALATVRLAAEVRRAHVRVVAAHELVAL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEAQSAAEATAKLAAKLGETGALNRLDQAREQVFYAETTAELAGARRVASSARERLIRL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGLWGDDANFRLPNRLPMLPRRPLTEPFIERDAVAHRIDLQIARRELTALATALQLTEAT HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFVSLLDLAGIDRKTGEPEGRVIRERGYDVQFQIPIFDGGEVRVRQAAESYNIAFNRLAE HHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH RAVTVRSEARDAYRSYRAAYDIAGHYAREVLPLRQIISEEMQLRYSSMQVDIFALLLEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLASRRAAIDAIRDFFLAEAELSAAVNGGVAAGEDPAPQTARALAPNND HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA