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The map label for this gene is xylB [H]

Identifier: 146338478

GI number: 146338478

Start: 1489826

End: 1491427

Strand: Reverse

Name: xylB [H]

Synonym: BRADO1395

Alternate gene names: 146338478

Gene position: 1491427-1489826 (Counterclockwise)

Preceding gene: 146338482

Following gene: 146338477

Centisome position: 20.0

GC content: 69.66

Gene sequence:

>1602_bases
ATGGGGCGGATGGCTGCATGTCAATACTCCTCGGAAATGATCTCGGCGGTCACGCCTCTTGTCATGCCTTGCGATGACTC
GCTTCCGGATGACAAGGCCGGCGGGCTTCTGGTATCGCTCCACGCCAAATCCGTCACCATGCCTGCGTCGCGAGGCGTCA
TGTATCTCGGCATCGATCTCGGCACGTCCGCCGTCAAGACGATTCTCGTCGACGACGCACAGCGCGTGATCGCAAGCCGC
AGCCAGCCGCTCGGCGTCGACGTGCCGCGGCCGGGCTGGGCGGAGCAGGATCCCGCCGCCTGGATCTCGGCCGTGTTCGC
GACGCTCGATGCGCTGAAGGCCGATCATGCCGGCGAGTTGGCGGAGGTCGCGGGCATCGGGCTGTCCGGCCAGATGCACG
GCCCGGTGCTGCTCGACGCCAGGCTGACGCCGCTGCGTCCCTGCATCCTCTGGAATGATGGCCGCTCGGCCACTGAATGC
GCCGTGCTGGAACAGCGCTGGCCGGCGCTGCGGCAGGTGACCGGCAACAAGGCGATGCCCGGCTTCGCCGCGCCGAAGCT
CGTCTGGATCGCCGAGCACGAGCCGGAGATCTTCGACGCCACACGCCTCGTGCTGCTGCCCAAGGCCTATGTCCGGCTCG
TATTGTCCGGCGAGGCGATCGAGGATGTCTCGGATGCTTCCGGCTCGCTGTGGCTCGATGTCGTCAGGCGCGACTGGTCG
GACGAGGCTCTTGCCGCCACCGGGCTTGCGCGCGCGCGGATGCCGCGCCTCGTCGAAGGCTGCGCGCCCGCGGGCCGCCT
GCGCGACGATCTCGCCCAGCGCTGGGGCATGACGCAGCGGCCGGTCATCGCCGGCGGGGCCGGCGACAACCCGGCCGGCG
CGGTCGGCATCGGCGCGATCCGGCCGGGCGCCACCTTCATCACGCTCGGCACGTCCGGCGCGGTGATCACGCCCGTCGCG
TCCGTCACGCCCAATCCCGCGCGAATCGTTCACACCTTCTGCCACGCGATTCCAGCCTTGTGGCTGCAGGCCGGCGCGAT
GCTGTCCGCCGCCTCCTGTCTTGCCTGGATCGCGCGGCTGCTGGGCGCCAGCGAAGCCGAGTTGCTCGCGCCGCTCGGCA
CATCGCCCACAGCGCCATCGCCGGTCAGCTTCCTGCCCTATCTCGCTGGCGAGCGTACGCCGCATGACGATCCCGATGTG
CGCGGCCTGCTCGATGGCCTGAGCCATGCGACCGATCGCAACGCCATCGTGCAGGCCGTGCTCGAGGGCGTCGCCTTTGC
ATTGGCCGATTGCCGCGATGCGCTGACGGATACGGGCCTCGTGATATCCGAAGCGGATGCGATCGGTGGCGGCTCGCGGT
CCGACCTGTGGCTCGCGATCCTGGCGAACATTCTGAACATCCCGATCCATCGCCTGGCCGAAGGCGAAACCGGCGCGGCC
TTCGGGGCCGCGCGACTGGCGCGGCTCGCCGTGACCGGTGAAGACATAGCCGATGTCTGCACGCCGCCGGCGCGCGTGCG
CTCCTTTGTGCCGGATCCCGGGCTGGCGGCAGACTATGCCGAGCGGCTGCGGCACTGGCGCCGGCTGTATCGCCGGCCTT
AG

Upstream 100 bases:

>100_bases
CCTTCCTCGGCGAAGCGCACCGCGATCGCGCGGCCGATACCCTGCGCGGCACCGGTCACCAGCGCGTAGTGTCCAAGGAG
ACGCGGGGCGCGCTCGGTCG

Downstream 100 bases:

>100_bases
CGGGCGCCACAAGCGCCGACGTGGCACGTCGATGGTCTTTCATATTGTATTCGGCAACAGCCTCTAGTTTAATGGCGTCC
CCGCGCCGACATCAATGAGC

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MGRMAACQYSSEMISAVTPLVMPCDDSLPDDKAGGLLVSLHAKSVTMPASRGVMYLGIDLGTSAVKTILVDDAQRVIASR
SQPLGVDVPRPGWAEQDPAAWISAVFATLDALKADHAGELAEVAGIGLSGQMHGPVLLDARLTPLRPCILWNDGRSATEC
AVLEQRWPALRQVTGNKAMPGFAAPKLVWIAEHEPEIFDATRLVLLPKAYVRLVLSGEAIEDVSDASGSLWLDVVRRDWS
DEALAATGLARARMPRLVEGCAPAGRLRDDLAQRWGMTQRPVIAGGAGDNPAGAVGIGAIRPGATFITLGTSGAVITPVA
SVTPNPARIVHTFCHAIPALWLQAGAMLSAASCLAWIARLLGASEAELLAPLGTSPTAPSPVSFLPYLAGERTPHDDPDV
RGLLDGLSHATDRNAIVQAVLEGVAFALADCRDALTDTGLVISEADAIGGGSRSDLWLAILANILNIPIHRLAEGETGAA
FGAARLARLAVTGEDIADVCTPPARVRSFVPDPGLAADYAERLRHWRRLYRRP

Sequences:

>Translated_533_residues
MGRMAACQYSSEMISAVTPLVMPCDDSLPDDKAGGLLVSLHAKSVTMPASRGVMYLGIDLGTSAVKTILVDDAQRVIASR
SQPLGVDVPRPGWAEQDPAAWISAVFATLDALKADHAGELAEVAGIGLSGQMHGPVLLDARLTPLRPCILWNDGRSATEC
AVLEQRWPALRQVTGNKAMPGFAAPKLVWIAEHEPEIFDATRLVLLPKAYVRLVLSGEAIEDVSDASGSLWLDVVRRDWS
DEALAATGLARARMPRLVEGCAPAGRLRDDLAQRWGMTQRPVIAGGAGDNPAGAVGIGAIRPGATFITLGTSGAVITPVA
SVTPNPARIVHTFCHAIPALWLQAGAMLSAASCLAWIARLLGASEAELLAPLGTSPTAPSPVSFLPYLAGERTPHDDPDV
RGLLDGLSHATDRNAIVQAVLEGVAFALADCRDALTDTGLVISEADAIGGGSRSDLWLAILANILNIPIHRLAEGETGAA
FGAARLARLAVTGEDIADVCTPPARVRSFVPDPGLAADYAERLRHWRRLYRRP
>Mature_532_residues
GRMAACQYSSEMISAVTPLVMPCDDSLPDDKAGGLLVSLHAKSVTMPASRGVMYLGIDLGTSAVKTILVDDAQRVIASRS
QPLGVDVPRPGWAEQDPAAWISAVFATLDALKADHAGELAEVAGIGLSGQMHGPVLLDARLTPLRPCILWNDGRSATECA
VLEQRWPALRQVTGNKAMPGFAAPKLVWIAEHEPEIFDATRLVLLPKAYVRLVLSGEAIEDVSDASGSLWLDVVRRDWSD
EALAATGLARARMPRLVEGCAPAGRLRDDLAQRWGMTQRPVIAGGAGDNPAGAVGIGAIRPGATFITLGTSGAVITPVAS
VTPNPARIVHTFCHAIPALWLQAGAMLSAASCLAWIARLLGASEAELLAPLGTSPTAPSPVSFLPYLAGERTPHDDPDVR
GLLDGLSHATDRNAIVQAVLEGVAFALADCRDALTDTGLVISEADAIGGGSRSDLWLAILANILNIPIHRLAEGETGAAF
GAARLARLAVTGEDIADVCTPPARVRSFVPDPGLAADYAERLRHWRRLYRRP

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=451, Percent_Identity=23.9467849223947, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI189409120, Length=451, Percent_Identity=23.9467849223947, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI4504007, Length=451, Percent_Identity=23.9467849223947, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI41393575, Length=445, Percent_Identity=22.9213483146067, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI18860918, Length=512, Percent_Identity=23.2421875, Blast_Score=91, Evalue=3e-18,
Organism=Escherichia coli, GI1789987, Length=481, Percent_Identity=45.5301455301455, Blast_Score=387, Evalue=1e-108,
Organism=Escherichia coli, GI1790361, Length=498, Percent_Identity=24.0963855421687, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1790005, Length=493, Percent_Identity=24.9492900608519, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1789168, Length=452, Percent_Identity=27.212389380531, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787789, Length=526, Percent_Identity=24.3346007604563, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786249, Length=299, Percent_Identity=26.4214046822742, Blast_Score=69, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17535599, Length=436, Percent_Identity=24.3119266055046, Blast_Score=94, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321633, Length=355, Percent_Identity=22.5352112676056, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24655555, Length=506, Percent_Identity=25.4940711462451, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24655560, Length=506, Percent_Identity=25.4940711462451, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24655570, Length=506, Percent_Identity=25.4940711462451, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24655574, Length=506, Percent_Identity=25.4940711462451, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24655565, Length=506, Percent_Identity=25.4940711462451, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI17864214, Length=499, Percent_Identity=23.6472945891784, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24654573, Length=435, Percent_Identity=22.9885057471264, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI19920476, Length=498, Percent_Identity=22.6907630522088, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21356607, Length=554, Percent_Identity=22.2021660649819, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 56131; Mature: 56000

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMAACQYSSEMISAVTPLVMPCDDSLPDDKAGGLLVSLHAKSVTMPASRGVMYLGIDL
CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCEEEEEEEC
GTSAVKTILVDDAQRVIASRSQPLGVDVPRPGWAEQDPAAWISAVFATLDALKADHAGEL
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
AEVAGIGLSGQMHGPVLLDARLTPLRPCILWNDGRSATECAVLEQRWPALRQVTGNKAMP
HHHHCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCHHHHHHCCCCCCC
GFAAPKLVWIAEHEPEIFDATRLVLLPKAYVRLVLSGEAIEDVSDASGSLWLDVVRRDWS
CCCCCEEEEEECCCCCHHHHHHHEEECHHHHHHHHCCCHHHHHHCCCCCEEHHHHHCCCC
DEALAATGLARARMPRLVEGCAPAGRLRDDLAQRWGMTQRPVIAGGAGDNPAGAVGIGAI
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCC
RPGATFITLGTSGAVITPVASVTPNPARIVHTFCHAIPALWLQAGAMLSAASCLAWIARL
CCCCEEEEECCCCCEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGASEAELLAPLGTSPTAPSPVSFLPYLAGERTPHDDPDVRGLLDGLSHATDRNAIVQAV
HCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
LEGVAFALADCRDALTDTGLVISEADAIGGGSRSDLWLAILANILNIPIHRLAEGETGAA
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHH
FGAARLARLAVTGEDIADVCTPPARVRSFVPDPGLAADYAERLRHWRRLYRRP
HHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRMAACQYSSEMISAVTPLVMPCDDSLPDDKAGGLLVSLHAKSVTMPASRGVMYLGIDL
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCEEEEEEEC
GTSAVKTILVDDAQRVIASRSQPLGVDVPRPGWAEQDPAAWISAVFATLDALKADHAGEL
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
AEVAGIGLSGQMHGPVLLDARLTPLRPCILWNDGRSATECAVLEQRWPALRQVTGNKAMP
HHHHCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCHHHHHHCCCCCCC
GFAAPKLVWIAEHEPEIFDATRLVLLPKAYVRLVLSGEAIEDVSDASGSLWLDVVRRDWS
CCCCCEEEEEECCCCCHHHHHHHEEECHHHHHHHHCCCHHHHHHCCCCCEEHHHHHCCCC
DEALAATGLARARMPRLVEGCAPAGRLRDDLAQRWGMTQRPVIAGGAGDNPAGAVGIGAI
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCC
RPGATFITLGTSGAVITPVASVTPNPARIVHTFCHAIPALWLQAGAMLSAASCLAWIARL
CCCCEEEEECCCCCEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGASEAELLAPLGTSPTAPSPVSFLPYLAGERTPHDDPDVRGLLDGLSHATDRNAIVQAV
HCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
LEGVAFALADCRDALTDTGLVISEADAIGGGSRSDLWLAILANILNIPIHRLAEGETGAA
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHH
FGAARLARLAVTGEDIADVCTPPARVRSFVPDPGLAADYAERLRHWRRLYRRP
HHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]