| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337891
Identifier: 146337891
GI number: 146337891
Start: 822312
End: 823007
Strand: Reverse
Name: 146337891
Synonym: BRADO0776
Alternate gene names: NA
Gene position: 823007-822312 (Counterclockwise)
Preceding gene: 146337892
Following gene: 146337890
Centisome position: 11.04
GC content: 64.94
Gene sequence:
>696_bases ATGACAAAATCACCGCGCGCCTTCGATCACGTCGACACCTGGGTGTTCGATCTCGACAACACGCTGTATCCGCACCACGT CAATCTGTGGCAGCAGGTCGACGCGCGGATCGGCGAGTTCGTGTCCAACTGGCTGAAGGTCGACGCCGCCGAGGCGCGGC GCATTCAGAAGGACTACTACAAGCGCTACGGCACCACGATGCGCGGCATGATGACCGAGCATGGCGTGCATGCCGACGAC TTCCTCGCCTACGTGCACAAGATCGACCACTCGCCGCTCGAGCCGAACCCGGCGATGGGCGCGGCGATCGAGCAGCTGCC GGGGCGCAAGCTGATCCTGACCAACGGCTCGGTCGACCATGTCGACGCGGTGCTGGCGCGGCTCGGCATCGCCGGGCATT TCCACGGCGTGTTCGACATCATCGCCGCCGAGTTGACGCCGAAGCCCGCGCGCGAGACCTACGACAAATTCCTGGCGCTG CACGCCGTCGATCCGACCCGGGCCGCGATGTTCGAGGACCTCGCCCGCAATCTCGTGGTGCCGCACGATCTCGGCATGAC CACCGTGCTGGTGGTGCCCGACGGCACCAAGGAGGTGGTGCGCGAGGATTGGGAACTGTCGGGTCGCGACGATCCGCATG TCGATCATGTCACGGATGATCTGACGGGGTTCTTGCAGCGGCTGGTCTCCGCATAG
Upstream 100 bases:
>100_bases GAGATCACGCGGTATGGGTCCCGGCGTTCGCCGGGACGACAGCGGGATATGACGCGCCAGCCGGGCAGGTTGACCTGAGG CAGAATGGATCGAGGCAACA
Downstream 100 bases:
>100_bases CCTTCGTTGCGTCGTCTCGCACAAGCGACCGGCTGGCTGGTCATGAGTTGCGACGGCGGTCCGCCAAATTCGGTGTCGTC CCGGGCTTGACCCGGGACCC
Product: pyrimidine 5-nucleotidase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTKSPRAFDHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKVDAAEARRIQKDYYKRYGTTMRGMMTEHGVHADD FLAYVHKIDHSPLEPNPAMGAAIEQLPGRKLILTNGSVDHVDAVLARLGIAGHFHGVFDIIAAELTPKPARETYDKFLAL HAVDPTRAAMFEDLARNLVVPHDLGMTTVLVVPDGTKEVVREDWELSGRDDPHVDHVTDDLTGFLQRLVSA
Sequences:
>Translated_231_residues MTKSPRAFDHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKVDAAEARRIQKDYYKRYGTTMRGMMTEHGVHADD FLAYVHKIDHSPLEPNPAMGAAIEQLPGRKLILTNGSVDHVDAVLARLGIAGHFHGVFDIIAAELTPKPARETYDKFLAL HAVDPTRAAMFEDLARNLVVPHDLGMTTVLVVPDGTKEVVREDWELSGRDDPHVDHVTDDLTGFLQRLVSA >Mature_230_residues TKSPRAFDHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKVDAAEARRIQKDYYKRYGTTMRGMMTEHGVHADDF LAYVHKIDHSPLEPNPAMGAAIEQLPGRKLILTNGSVDHVDAVLARLGIAGHFHGVFDIIAAELTPKPARETYDKFLALH AVDPTRAAMFEDLARNLVVPHDLGMTTVLVVPDGTKEVVREDWELSGRDDPHVDHVTDDLTGFLQRLVSA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25995; Mature: 25864
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSPRAFDHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKVDAAEARRIQKDYY CCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH KRYGTTMRGMMTEHGVHADDFLAYVHKIDHSPLEPNPAMGAAIEQLPGRKLILTNGSVDH HHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCHHH VDAVLARLGIAGHFHGVFDIIAAELTPKPARETYDKFLALHAVDPTRAAMFEDLARNLVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC PHDLGMTTVLVVPDGTKEVVREDWELSGRDDPHVDHVTDDLTGFLQRLVSA CCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKSPRAFDHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKVDAAEARRIQKDYY CCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH KRYGTTMRGMMTEHGVHADDFLAYVHKIDHSPLEPNPAMGAAIEQLPGRKLILTNGSVDH HHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCHHH VDAVLARLGIAGHFHGVFDIIAAELTPKPARETYDKFLALHAVDPTRAAMFEDLARNLVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC PHDLGMTTVLVVPDGTKEVVREDWELSGRDDPHVDHVTDDLTGFLQRLVSA CCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA