| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337892
Identifier: 146337892
GI number: 146337892
Start: 823228
End: 824295
Strand: Reverse
Name: 146337892
Synonym: BRADO0777
Alternate gene names: NA
Gene position: 824295-823228 (Counterclockwise)
Preceding gene: 146337893
Following gene: 146337891
Centisome position: 11.05
GC content: 66.85
Gene sequence:
>1068_bases GTGGATGGCCGGGTCAAGCCCGGCCATGACTGCGGAGAGAGAGCTGGGTACCCAATATCTCTCCGAGCTCGTTTCGCAGT CTCCCTGGCTGCACTCCTTCTTCCGCTTCTCGCCTCCGCCACCCCGGCCCGCGCCGATCTCAAGCTCTGCAACCGCATGA GCTACGTCGTCGAGGCCGCGATCGGCATCGACGAGAAGGCGGCGACCGCGACGCGTGGCTGGTTCCGGCTCGATCCGGCG ACCTGCCGCGTGGTGCTGCAGGGCACGATGACGGCCGATCGCATCCTGCTTCACGCGCGCGCGCTGAGCCTGTATGGCGC CTCACCGATGGCTGAGAACGGCAACGACCAGCTTTGCGTGGCCGCATCCGACAATTTCGTCATCGCCGCCGCGCGACAGT GCCGTACCGGCCAGACGCCGGCGGCGTTCACGCAGGTGACGCCGACCAAGACCGACGACGGCACCTTGATCGCCTATCTC GCGGAGAGTGCCGAATACGACGATGAGCAGGCCCGCCTTGCCGGCATCCAGCGGCTGCTCGGCATCGCCGGCTATGACGC CTCGCCGATCGACGGCGTCGACGGACCGAAGACGCAGGCGGCGCTGGCCGCGTTCCTGAAGAGCCGCGGACTGGCGTCCG ATGTCGTCTCGCAGCCGAGCTTCTTCGCCACGATGGTCGATGCGGTGCAGACGCCATCACCGGTCGGGCTGACCTGGTGC AACGACACCCCGCACAAGGTGATGGCGGCCGTCGGCACCGATGACGGCCGCACGGTCGTCAGCCGCGGCTGGTATCGCAT CGATGCCGGCAAATGCCTGCATCCTGACATCACCGGACAGCCGAAAAAGGTCTACAGCTTCGCGGAAGCGGTCGACGACG ACAACCGCACCATCAAGCTGAAGAACAAGCCGCTGAACTGGGGTGGCCTGGTGCAGCTCTGTACGCGCGAGAACAAGTTC GAGACCACCGAGCAGGGCGACTGCCCAAGCCGCGGCTTCACCGCCACCGGCTTCACCGCCGTCGACATCACCCGCGGCGG CAAGACGCTGCGCTTTGCGCTGCCGTGA
Upstream 100 bases:
>100_bases TGATCCACAAGTGATGGGCAGGGCCGCCATAAGCTCAAGTCTCGTCATGCCCGGGCTTGACCCGGGCATCCATGAAGCTG TTTGCGGTGGGTGCAAGGAC
Downstream 100 bases:
>100_bases CCGCTATTCCAATGATGGCCACGATGCCGTGCCACCCTCTGCCGTCATCCCGGCGAACGCCGGGATCCATAACCACCGGC CGTGGTGTGGGCCACCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDGRVKPGHDCGERAGYPISLRARFAVSLAALLLPLLASATPARADLKLCNRMSYVVEAAIGIDEKAATATRGWFRLDPA TCRVVLQGTMTADRILLHARALSLYGASPMAENGNDQLCVAASDNFVIAAARQCRTGQTPAAFTQVTPTKTDDGTLIAYL AESAEYDDEQARLAGIQRLLGIAGYDASPIDGVDGPKTQAALAAFLKSRGLASDVVSQPSFFATMVDAVQTPSPVGLTWC NDTPHKVMAAVGTDDGRTVVSRGWYRIDAGKCLHPDITGQPKKVYSFAEAVDDDNRTIKLKNKPLNWGGLVQLCTRENKF ETTEQGDCPSRGFTATGFTAVDITRGGKTLRFALP
Sequences:
>Translated_355_residues MDGRVKPGHDCGERAGYPISLRARFAVSLAALLLPLLASATPARADLKLCNRMSYVVEAAIGIDEKAATATRGWFRLDPA TCRVVLQGTMTADRILLHARALSLYGASPMAENGNDQLCVAASDNFVIAAARQCRTGQTPAAFTQVTPTKTDDGTLIAYL AESAEYDDEQARLAGIQRLLGIAGYDASPIDGVDGPKTQAALAAFLKSRGLASDVVSQPSFFATMVDAVQTPSPVGLTWC NDTPHKVMAAVGTDDGRTVVSRGWYRIDAGKCLHPDITGQPKKVYSFAEAVDDDNRTIKLKNKPLNWGGLVQLCTRENKF ETTEQGDCPSRGFTATGFTAVDITRGGKTLRFALP >Mature_355_residues MDGRVKPGHDCGERAGYPISLRARFAVSLAALLLPLLASATPARADLKLCNRMSYVVEAAIGIDEKAATATRGWFRLDPA TCRVVLQGTMTADRILLHARALSLYGASPMAENGNDQLCVAASDNFVIAAARQCRTGQTPAAFTQVTPTKTDDGTLIAYL AESAEYDDEQARLAGIQRLLGIAGYDASPIDGVDGPKTQAALAAFLKSRGLASDVVSQPSFFATMVDAVQTPSPVGLTWC NDTPHKVMAAVGTDDGRTVVSRGWYRIDAGKCLHPDITGQPKKVYSFAEAVDDDNRTIKLKNKPLNWGGLVQLCTRENKF ETTEQGDCPSRGFTATGFTAVDITRGGKTLRFALP
Specific function: Unknown
COG id: COG5480
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37915; Mature: 37915
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGRVKPGHDCGERAGYPISLRARFAVSLAALLLPLLASATPARADLKLCNRMSYVVEAA CCCCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IGIDEKAATATRGWFRLDPATCRVVLQGTMTADRILLHARALSLYGASPMAENGNDQLCV HCCCCHHHHHCCCEEEECHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE AASDNFVIAAARQCRTGQTPAAFTQVTPTKTDDGTLIAYLAESAEYDDEQARLAGIQRLL EECCCEEEEEEHHCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH GIAGYDASPIDGVDGPKTQAALAAFLKSRGLASDVVSQPSFFATMVDAVQTPSPVGLTWC HHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEC NDTPHKVMAAVGTDDGRTVVSRGWYRIDAGKCLHPDITGQPKKVYSFAEAVDDDNRTIKL CCCHHHEEEEECCCCCCCHHHCCEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEE KNKPLNWGGLVQLCTRENKFETTEQGDCPSRGFTATGFTAVDITRGGKTLRFALP ECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCEEEEECC >Mature Secondary Structure MDGRVKPGHDCGERAGYPISLRARFAVSLAALLLPLLASATPARADLKLCNRMSYVVEAA CCCCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IGIDEKAATATRGWFRLDPATCRVVLQGTMTADRILLHARALSLYGASPMAENGNDQLCV HCCCCHHHHHCCCEEEECHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE AASDNFVIAAARQCRTGQTPAAFTQVTPTKTDDGTLIAYLAESAEYDDEQARLAGIQRLL EECCCEEEEEEHHCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH GIAGYDASPIDGVDGPKTQAALAAFLKSRGLASDVVSQPSFFATMVDAVQTPSPVGLTWC HHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEC NDTPHKVMAAVGTDDGRTVVSRGWYRIDAGKCLHPDITGQPKKVYSFAEAVDDDNRTIKL CCCHHHEEEEECCCCCCCHHHCCEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEE KNKPLNWGGLVQLCTRENKFETTEQGDCPSRGFTATGFTAVDITRGGKTLRFALP ECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA