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The map label for this gene is dapD [H]

Identifier: 146337890

GI number: 146337890

Start: 821104

End: 821949

Strand: Reverse

Name: dapD [H]

Synonym: BRADO0775

Alternate gene names: 146337890

Gene position: 821949-821104 (Counterclockwise)

Preceding gene: 146337891

Following gene: 146337889

Centisome position: 11.02

GC content: 69.27

Gene sequence:

>846_bases
ATGTCACTGTCCGCCCTGGAATCCACCATCAACAGCGCCTTCGACGCCCGTGACGGCGTGTCGACCTCGACCAAGGGCGA
GGTGCGCGACGCCGTGGAGAGCGCGCTGGAGCTGCTCGACAAGGGCGAGGCCCGCGTCGCCGAGCGCGCCGCGGATGGCA
AGTGGAGCGTCAACCAGTGGCTGAAGAAGGCCGTGCTGCTGTCGTTCCGCCTCAACGACATGAGCGTGATTCCCGGCGGC
CCGGGCCAGGCGTCGTGGTGGGACAAGGTGCCGTCGAAGTTCGAGGGCTGGGGCGAGAACCGCTTTCGCGAGGCCGGCTT
CCGCGCCGTGCCCGGCGCGATCGTGCGCCGCTCGGCCTTCATCGCCAGGAACGTCGTGCTGATGCCGTCCTTCGTCAATC
TCGGCGCCTATGTCGACGAGTCCACCATGGTCGACACCTGGTCGACGGTCGGCTCCTGCGCCCAGATCGGCAAGCGCGTG
CACATCTCCGGCGGCGTCGGCATCGGCGGCGTGCTGGAGCCGCTGCAGGCCGGCCCGGTGATCATCGAGGATGACTGCTT
CATCGGCGCGCGCTCGGAGGTCGCCGAGGGCGTCATCGTCCGCAAGGGCGCGGTGCTGGCGATGGGCGTGTTCCTGGGCG
CCTCGACCAAGATCGTCGACCGCGAGACCGGCGAGACCTTCGTCGGCGAGGTGCCGGAATATGCCGTCGTGGTGCCGGGC
GCGCTGCCGGGCAAGCCGATGAAGAACGGGCAGATCGGCCCGAGCACGGCCTGCGCCGTCATCGTCAAGCGCGTCGACGA
GCGCACCCGCTCCAAGACCTCGATCAACGAGCTGCTGCGCGACTGA

Upstream 100 bases:

>100_bases
GACTCCCCTGCCCCAAACTCCGAAAAAGCCCGCCTGCCCCACCCTGCTCGTACATGACCGACCCCAGGCGACCCGCCCGG
GACCAAGCGAGGATCGACCG

Downstream 100 bases:

>100_bases
TCATCCGGCGTCGGGCGGCCGCACTAGCGGCCGCCCGAACGCCCATGGTAAGCGGGGGGCATGACCGATGCCCTCACCAT
CACCCGCGACCTGATCCGCT

Product: 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSLSALESTINSAFDARDGVSTSTKGEVRDAVESALELLDKGEARVAERAADGKWSVNQWLKKAVLLSFRLNDMSVIPGG
PGQASWWDKVPSKFEGWGENRFREAGFRAVPGAIVRRSAFIARNVVLMPSFVNLGAYVDESTMVDTWSTVGSCAQIGKRV
HISGGVGIGGVLEPLQAGPVIIEDDCFIGARSEVAEGVIVRKGAVLAMGVFLGASTKIVDRETGETFVGEVPEYAVVVPG
ALPGKPMKNGQIGPSTACAVIVKRVDERTRSKTSINELLRD

Sequences:

>Translated_281_residues
MSLSALESTINSAFDARDGVSTSTKGEVRDAVESALELLDKGEARVAERAADGKWSVNQWLKKAVLLSFRLNDMSVIPGG
PGQASWWDKVPSKFEGWGENRFREAGFRAVPGAIVRRSAFIARNVVLMPSFVNLGAYVDESTMVDTWSTVGSCAQIGKRV
HISGGVGIGGVLEPLQAGPVIIEDDCFIGARSEVAEGVIVRKGAVLAMGVFLGASTKIVDRETGETFVGEVPEYAVVVPG
ALPGKPMKNGQIGPSTACAVIVKRVDERTRSKTSINELLRD
>Mature_280_residues
SLSALESTINSAFDARDGVSTSTKGEVRDAVESALELLDKGEARVAERAADGKWSVNQWLKKAVLLSFRLNDMSVIPGGP
GQASWWDKVPSKFEGWGENRFREAGFRAVPGAIVRRSAFIARNVVLMPSFVNLGAYVDESTMVDTWSTVGSCAQIGKRVH
ISGGVGIGGVLEPLQAGPVIIEDDCFIGARSEVAEGVIVRKGAVLAMGVFLGASTKIVDRETGETFVGEVPEYAVVVPGA
LPGKPMKNGQIGPSTACAVIVKRVDERTRSKTSINELLRD

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; fourth step. [C]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=279, Percent_Identity=60.573476702509, Blast_Score=310, Evalue=6e-86,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005664
- InterPro:   IPR023180
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =2.3.1.117 [H]

Molecular weight: Translated: 29921; Mature: 29790

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSALESTINSAFDARDGVSTSTKGEVRDAVESALELLDKGEARVAERAADGKWSVNQW
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
LKKAVLLSFRLNDMSVIPGGPGQASWWDKVPSKFEGWGENRFREAGFRAVPGAIVRRSAF
HHHHHHHHHCCCCEEECCCCCCCCCHHHHCCHHHCCCCCHHHHHCCCCCCCHHHHHHHHH
IARNVVLMPSFVNLGAYVDESTMVDTWSTVGSCAQIGKRVHISGGVGIGGVLEPLQAGPV
HHHCEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCE
IIEDDCFIGARSEVAEGVIVRKGAVLAMGVFLGASTKIVDRETGETFVGEVPEYAVVVPG
EEECCCCCCCHHHHHCCCCEECCHHHHHHHHHCCCCEEEECCCCCHHHCCCCCEEEEECC
ALPGKPMKNGQIGPSTACAVIVKRVDERTRSKTSINELLRD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSALESTINSAFDARDGVSTSTKGEVRDAVESALELLDKGEARVAERAADGKWSVNQW
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
LKKAVLLSFRLNDMSVIPGGPGQASWWDKVPSKFEGWGENRFREAGFRAVPGAIVRRSAF
HHHHHHHHHCCCCEEECCCCCCCCCHHHHCCHHHCCCCCHHHHHCCCCCCCHHHHHHHHH
IARNVVLMPSFVNLGAYVDESTMVDTWSTVGSCAQIGKRVHISGGVGIGGVLEPLQAGPV
HHHCEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCE
IIEDDCFIGARSEVAEGVIVRKGAVLAMGVFLGASTKIVDRETGETFVGEVPEYAVVVPG
EEECCCCCCCHHHHHCCCCEECCHHHHHHHHHCCCCEEEECCCCCHHHCCCCCEEEEECC
ALPGKPMKNGQIGPSTACAVIVKRVDERTRSKTSINELLRD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]