| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337859
Identifier: 146337859
GI number: 146337859
Start: 782249
End: 783067
Strand: Reverse
Name: 146337859
Synonym: BRADO0742
Alternate gene names: NA
Gene position: 783067-782249 (Counterclockwise)
Preceding gene: 146337860
Following gene: 146337856
Centisome position: 10.5
GC content: 66.18
Gene sequence:
>819_bases ATGACCGACACGCCGACCACGTATTTGTTCGACGAGGCCACCCGCGTCACGGCCGGCGACAGCCGCTGGCAGGGGCGGAC CAGCCCGGACTACTGGGCCTTCGTCGGTCCGTTCGGCGGCGTCACCGCGGCGACCGTGCTGCGCGCGCTGATCGAGCATC CGCAAATCATGGGCGATCCGCTGGCGGTGACGGTCAATTACTGCGCGCCGATTGCGGAGGGGTCGTTCGATCTCGACGTG CGGCTGGTGAAGGCCAACCGCTCGTCGCAGCACTGGTGCGTCGAGCTGAGCCAGGGTGATGCCGACTCAGCGACGCTGGC GACGGCGGTCTTCGCTGAGCGCCGGCCGTCTTGGTCGCACCAGCCGGCGATCAAGCCGGACGCGCCGCCGTTCGATCAGG TCAAGCGCTATCCCGATGCCGGAATGTCGTGGACCAGGCAATATGATTTCCGCTTCGTGGAAGGACGGCCAGACTTCGGC AGCCGTTCGGATCAACCACGCAGCGCCTATTCGCGGCTCTGGATCTCCGACCGCAAGCCGCGCAAGCTCGACTGCCTGTC GCTGCTGTCGATGTCGGACGCCTTCTTCGGCCGCGCCTTCCACGTCCGCGGCGAATTGATTCCGTTCGGCACGGTGTCGC TAACCACCTACTTCCACGTCAGCCGCGAGGAGCTCGCGGCCGAGGACATCACCCATCTGCTGGCCACCGCGGATGCCAAG GTGTTCAACCGCAGCTACCAGGATCAGCACGGCGAGCTGTGGTCACCCTCGGGTCGGCTGCTCGCGACGACGACGCAGAT CGCGTATTTCAAGGCGTGA
Upstream 100 bases:
>100_bases AAGCGCTTCGTACGCATCAATGACCTGTGACGTCATTGCGGGTCTGGCCGAATTGCATCTGACCTGACGACCATCATACG ATGATCGTCAGGAGGAGCGC
Downstream 100 bases:
>100_bases GGGCCCAAGACCCTTCAACAATCTCGGTGTCGTCCCGGCCTCCGAGCCGGGACCCATAACCACCGTCCGGAGTTTTGCGA ACGCTGGAGCCGCCTTCCCG
Product: putative thioesterase/thiol ester dehydrase-isomerase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTDTPTTYLFDEATRVTAGDSRWQGRTSPDYWAFVGPFGGVTAATVLRALIEHPQIMGDPLAVTVNYCAPIAEGSFDLDV RLVKANRSSQHWCVELSQGDADSATLATAVFAERRPSWSHQPAIKPDAPPFDQVKRYPDAGMSWTRQYDFRFVEGRPDFG SRSDQPRSAYSRLWISDRKPRKLDCLSLLSMSDAFFGRAFHVRGELIPFGTVSLTTYFHVSREELAAEDITHLLATADAK VFNRSYQDQHGELWSPSGRLLATTTQIAYFKA
Sequences:
>Translated_272_residues MTDTPTTYLFDEATRVTAGDSRWQGRTSPDYWAFVGPFGGVTAATVLRALIEHPQIMGDPLAVTVNYCAPIAEGSFDLDV RLVKANRSSQHWCVELSQGDADSATLATAVFAERRPSWSHQPAIKPDAPPFDQVKRYPDAGMSWTRQYDFRFVEGRPDFG SRSDQPRSAYSRLWISDRKPRKLDCLSLLSMSDAFFGRAFHVRGELIPFGTVSLTTYFHVSREELAAEDITHLLATADAK VFNRSYQDQHGELWSPSGRLLATTTQIAYFKA >Mature_271_residues TDTPTTYLFDEATRVTAGDSRWQGRTSPDYWAFVGPFGGVTAATVLRALIEHPQIMGDPLAVTVNYCAPIAEGSFDLDVR LVKANRSSQHWCVELSQGDADSATLATAVFAERRPSWSHQPAIKPDAPPFDQVKRYPDAGMSWTRQYDFRFVEGRPDFGS RSDQPRSAYSRLWISDRKPRKLDCLSLLSMSDAFFGRAFHVRGELIPFGTVSLTTYFHVSREELAAEDITHLLATADAKV FNRSYQDQHGELWSPSGRLLATTTQIAYFKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30480; Mature: 30349
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPTTYLFDEATRVTAGDSRWQGRTSPDYWAFVGPFGGVTAATVLRALIEHPQIMGDP CCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCHHCCCC LAVTVNYCAPIAEGSFDLDVRLVKANRSSQHWCVELSQGDADSATLATAVFAERRPSWSH EEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC QPAIKPDAPPFDQVKRYPDAGMSWTRQYDFRFVEGRPDFGSRSDQPRSAYSRLWISDRKP CCCCCCCCCCHHHHHCCCCCCCCEEEEECEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC RKLDCLSLLSMSDAFFGRAFHVRGELIPFGTVSLTTYFHVSREELAAEDITHLLATADAK CHHHHHHHHHHHHHHHCEEEEECCCEECCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHH VFNRSYQDQHGELWSPSGRLLATTTQIAYFKA HHHCCHHCCCCCEECCCCCEEEEEEEEEEEEC >Mature Secondary Structure TDTPTTYLFDEATRVTAGDSRWQGRTSPDYWAFVGPFGGVTAATVLRALIEHPQIMGDP CCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCHHCCCC LAVTVNYCAPIAEGSFDLDVRLVKANRSSQHWCVELSQGDADSATLATAVFAERRPSWSH EEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC QPAIKPDAPPFDQVKRYPDAGMSWTRQYDFRFVEGRPDFGSRSDQPRSAYSRLWISDRKP CCCCCCCCCCHHHHHCCCCCCCCEEEEECEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC RKLDCLSLLSMSDAFFGRAFHVRGELIPFGTVSLTTYFHVSREELAAEDITHLLATADAK CHHHHHHHHHHHHHHHCEEEEECCCEECCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHH VFNRSYQDQHGELWSPSGRLLATTTQIAYFKA HHHCCHHCCCCCEECCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA