| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is glgP [H]
Identifier: 146337860
GI number: 146337860
Start: 783173
End: 785680
Strand: Reverse
Name: glgP [H]
Synonym: BRADO0743
Alternate gene names: 146337860
Gene position: 785680-783173 (Counterclockwise)
Preceding gene: 146337862
Following gene: 146337859
Centisome position: 10.54
GC content: 65.39
Gene sequence:
>2508_bases GTGACAGATCAGCCGTCCCAGCGCAGCTTCGTAAGCACCGGCCAGCCCGTCGACGAATTGGCCGTCGCCGAGATCAAGAG CGACATCCTGGCGAAGCTCCGGCTCGCGATTGGCAAGGAGGCGAGCCAGGCGACGCAGCAGGACTGGTATCATGCCGCGG CGCTGACCCTGCGCGACCGCATCGTGCATCGCTGGCTGACGGCGGACAAGGAGAGCTACGACGCCGGACGCAAGCGGGTC TATTATCTCAGCCTCGAATTCCTGATCGGCCGCCTGTTCACCGACGCGCTCAACAATATGGGCCTGATGAAGGTGTTCGA GACCGCGCTCGGCGATCTCGGCGTCGGCCTGATGGACCTGCGCAAATGCGAGCCGGATGCCGCGCTCGGCAATGGCGGCC TCGGCCGGCTCGCGGCGTGCTTCATGGAGAGCATGTCGACCCTGCAGATCCCGGCGATCGGCTACGGCATCCGCTATGAT TTCGGCCTGTTCCGCCAGGTCATCGTCGACGGCTGGCAGCACGAATATCCCGACGTTTGGCTGTCGTTCGGCAACCCCTG GGAATTCCAGCGCCCGGAGGTGGTCTATCACGTCCATTTCGGCGGCGGTGTCGAGCATGTCGACGACAAGGGCCGCGACC GCGCGATCTGGCATCCCGGCGAGACCGTGCAGGCGGTCGCCTATGACACGCCGATCGTCGGCTGGCGCGGCCAGCACGTG AATGCGCTGCGGCTATGGTCGGCGCGCTCGCCCGATCCGCTGAAGCTCGACGTGTTCAACTCCGGCGACTATCTCGGGGC GTCCGCCGAGGAAGCCCGCGCGGAGGCGATCTGCAAGTTCCTGTATCCGAACGACGAGAGCCCGGCGGGCCGCGAGCTGC GGCTGCGGCAGGAATATTTCTTCGTCTCGGCCTCGCTGCAGGATCTCGTCAAGCGCCATCTCGGCTCCGACGGCCAGTTG CGGAGTCTCGCGCAGAAGGCCGCGGTGCAGCTCAACGACACGCATCCCTCGCTCGCGGTCGCCGAGCTGATGCGGATCCT GGTCGACCTGCACAATTTCCGCTGGGACGAGGCTTGGAAGATCACCGTCGCGACCTTGTCCTACACCAACCACACCTTGC TGCCCGAGGCGCTGGAGACCTGGCCGGTCGAATTGTTCGAGCGGCTGCTGCCGCGGCATCTCGAGATCATCTACCGCATC AATGCGCAGCATCTCGCGCTCGCCGAGCAGCGCGCGCCCGGTGATATCGACTATCGCGCGTCGGTGTCGCTGATCGACGA GAAGAGCGGGCGCCGCGTTCGCATGGGCCAGCTCGCCTTCGTCGGCTCGCACCGCATCAACGGCGTCTCGGCGATGCATT CGGACCTGATGAAGGAGACCGTGTTCCACGATCTCAACCATCTTTATTCCGGCCGCATCACCAACAAGACCAACGGCATC ACCTTCCGCCGCTGGCTGACGCTCGCGAATCCGAAGCTGACGAGCCTGTTGCGCGAGGCCTGCGGCGACGCCATTGTCGA CGATCCGACCCTGCTGACGAGCCTGGAGAGCTACGTCGCGGATTCCGGCTTCCACCAGAAGTTCCGCGCGGTGAAGCACC ACAACAAGGTGCAGCTCGCGCGTCTCATCTCCGAGCGCATGAACGTTCGGCTCGACCCAAGCGCGCTGTTCGATGTGCAG ATCAAGCGCATCCACGAATACAAGCGGCAGCTGCTCAACATCCTCGAGGCGGTCGCGCTCTATCTCGACATGAAGGACGA CCCGCAGCGCGACTGGGTGCCGCGGGTCAAGATCTTCGCCGGCAAGGCGGCGGCGAGCTACCGCTATGCCAAGCTGATCA TCAAGCTGATCAACGACGTTGCCGAATTGGTCAACAACGATCCTGCGATCGGCGGCAAGCTCAAGGTCGTGTTCATGGCC GACTACAATGTCAGCCTGGCGGAAACGATCATTCCCGCCGCCGACCTGTCCGAGCAGATCTCGACCGCGGGCATGGAGGC GTCCGGCACCGGCAACATGAAGCTGGCGCTGAACGGCGCCATCACCATCGGCACGCTGGATGGCGCCAATATCGAGATCC GCGACAATGTCGGCGCCGACAACATCGCGATCTTCGGCATGGAGGCCGGCGACGTCATGCTGCGCCGCCAGCAGGGCCTG GATGCCACCGACGTCATCCGCCGCTCGCCGCGGCTGGGCCGCGCCATCGACGCGATCGCGAACGGCCTGTTCTCGCCGGG CGAGCCGGGCCGGTTCGAGCCGATCGCGCATGCGCTGCGCCACCTCGACCACTACATGGTCTCGGCCGATTTCGATTCCT ACTACGAGGCCCAGCGCGGCGTCGATGCGCGCTGGCAGTCCGAGCCGGCCTGGACCCGCGCCTCGATCCTCAACGTCGCG CGCATGGCGTGGTTCTCCTCCGATCGCACCATCCGCGAATATGCCGACGACATCTGGAACGTGCCGGTGGGACCGGTCGC GGCTCCGGCGCATGCGCAGCGGGCCTGA
Upstream 100 bases:
>100_bases TCCATCACCTTGCTGTGCGGACCAGCCTTTCCCCGGGTTTCGGACCGCGCGCAACCATCGTATGCTTTTACCGGTTCCTC GTAGCATCACAGGTTTCAAG
Downstream 100 bases:
>100_bases GGACCAAGCGCTTCGTACGCATCAATGACCTGTGACGTCATTGCGGGTCTGGCCGAATTGCATCTGACCTGACGACCATC ATACGATGATCGTCAGGAGG
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MTDQPSQRSFVSTGQPVDELAVAEIKSDILAKLRLAIGKEASQATQQDWYHAAALTLRDRIVHRWLTADKESYDAGRKRV YYLSLEFLIGRLFTDALNNMGLMKVFETALGDLGVGLMDLRKCEPDAALGNGGLGRLAACFMESMSTLQIPAIGYGIRYD FGLFRQVIVDGWQHEYPDVWLSFGNPWEFQRPEVVYHVHFGGGVEHVDDKGRDRAIWHPGETVQAVAYDTPIVGWRGQHV NALRLWSARSPDPLKLDVFNSGDYLGASAEEARAEAICKFLYPNDESPAGRELRLRQEYFFVSASLQDLVKRHLGSDGQL RSLAQKAAVQLNDTHPSLAVAELMRILVDLHNFRWDEAWKITVATLSYTNHTLLPEALETWPVELFERLLPRHLEIIYRI NAQHLALAEQRAPGDIDYRASVSLIDEKSGRRVRMGQLAFVGSHRINGVSAMHSDLMKETVFHDLNHLYSGRITNKTNGI TFRRWLTLANPKLTSLLREACGDAIVDDPTLLTSLESYVADSGFHQKFRAVKHHNKVQLARLISERMNVRLDPSALFDVQ IKRIHEYKRQLLNILEAVALYLDMKDDPQRDWVPRVKIFAGKAAASYRYAKLIIKLINDVAELVNNDPAIGGKLKVVFMA DYNVSLAETIIPAADLSEQISTAGMEASGTGNMKLALNGAITIGTLDGANIEIRDNVGADNIAIFGMEAGDVMLRRQQGL DATDVIRRSPRLGRAIDAIANGLFSPGEPGRFEPIAHALRHLDHYMVSADFDSYYEAQRGVDARWQSEPAWTRASILNVA RMAWFSSDRTIREYADDIWNVPVGPVAAPAHAQRA
Sequences:
>Translated_835_residues MTDQPSQRSFVSTGQPVDELAVAEIKSDILAKLRLAIGKEASQATQQDWYHAAALTLRDRIVHRWLTADKESYDAGRKRV YYLSLEFLIGRLFTDALNNMGLMKVFETALGDLGVGLMDLRKCEPDAALGNGGLGRLAACFMESMSTLQIPAIGYGIRYD FGLFRQVIVDGWQHEYPDVWLSFGNPWEFQRPEVVYHVHFGGGVEHVDDKGRDRAIWHPGETVQAVAYDTPIVGWRGQHV NALRLWSARSPDPLKLDVFNSGDYLGASAEEARAEAICKFLYPNDESPAGRELRLRQEYFFVSASLQDLVKRHLGSDGQL RSLAQKAAVQLNDTHPSLAVAELMRILVDLHNFRWDEAWKITVATLSYTNHTLLPEALETWPVELFERLLPRHLEIIYRI NAQHLALAEQRAPGDIDYRASVSLIDEKSGRRVRMGQLAFVGSHRINGVSAMHSDLMKETVFHDLNHLYSGRITNKTNGI TFRRWLTLANPKLTSLLREACGDAIVDDPTLLTSLESYVADSGFHQKFRAVKHHNKVQLARLISERMNVRLDPSALFDVQ IKRIHEYKRQLLNILEAVALYLDMKDDPQRDWVPRVKIFAGKAAASYRYAKLIIKLINDVAELVNNDPAIGGKLKVVFMA DYNVSLAETIIPAADLSEQISTAGMEASGTGNMKLALNGAITIGTLDGANIEIRDNVGADNIAIFGMEAGDVMLRRQQGL DATDVIRRSPRLGRAIDAIANGLFSPGEPGRFEPIAHALRHLDHYMVSADFDSYYEAQRGVDARWQSEPAWTRASILNVA RMAWFSSDRTIREYADDIWNVPVGPVAAPAHAQRA >Mature_834_residues TDQPSQRSFVSTGQPVDELAVAEIKSDILAKLRLAIGKEASQATQQDWYHAAALTLRDRIVHRWLTADKESYDAGRKRVY YLSLEFLIGRLFTDALNNMGLMKVFETALGDLGVGLMDLRKCEPDAALGNGGLGRLAACFMESMSTLQIPAIGYGIRYDF GLFRQVIVDGWQHEYPDVWLSFGNPWEFQRPEVVYHVHFGGGVEHVDDKGRDRAIWHPGETVQAVAYDTPIVGWRGQHVN ALRLWSARSPDPLKLDVFNSGDYLGASAEEARAEAICKFLYPNDESPAGRELRLRQEYFFVSASLQDLVKRHLGSDGQLR SLAQKAAVQLNDTHPSLAVAELMRILVDLHNFRWDEAWKITVATLSYTNHTLLPEALETWPVELFERLLPRHLEIIYRIN AQHLALAEQRAPGDIDYRASVSLIDEKSGRRVRMGQLAFVGSHRINGVSAMHSDLMKETVFHDLNHLYSGRITNKTNGIT FRRWLTLANPKLTSLLREACGDAIVDDPTLLTSLESYVADSGFHQKFRAVKHHNKVQLARLISERMNVRLDPSALFDVQI KRIHEYKRQLLNILEAVALYLDMKDDPQRDWVPRVKIFAGKAAASYRYAKLIIKLINDVAELVNNDPAIGGKLKVVFMAD YNVSLAETIIPAADLSEQISTAGMEASGTGNMKLALNGAITIGTLDGANIEIRDNVGADNIAIFGMEAGDVMLRRQQGLD ATDVIRRSPRLGRAIDAIANGLFSPGEPGRFEPIAHALRHLDHYMVSADFDSYYEAQRGVDARWQSEPAWTRASILNVAR MAWFSSDRTIREYADDIWNVPVGPVAAPAHAQRA
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=829, Percent_Identity=48.1302774427021, Blast_Score=767, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=816, Percent_Identity=47.5490196078431, Blast_Score=753, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=817, Percent_Identity=47.0012239902081, Blast_Score=744, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=829, Percent_Identity=46.3208685162847, Blast_Score=719, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=671, Percent_Identity=47.3919523099851, Blast_Score=639, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=806, Percent_Identity=49.0074441687345, Blast_Score=780, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=747, Percent_Identity=46.3186077643909, Blast_Score=666, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=820, Percent_Identity=47.8048780487805, Blast_Score=775, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=820, Percent_Identity=47.8048780487805, Blast_Score=775, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=810, Percent_Identity=46.4197530864198, Blast_Score=670, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=808, Percent_Identity=47.8960396039604, Blast_Score=755, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=808, Percent_Identity=47.8960396039604, Blast_Score=755, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93512; Mature: 93380
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQPSQRSFVSTGQPVDELAVAEIKSDILAKLRLAIGKEASQATQQDWYHAAALTLRDR CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IVHRWLTADKESYDAGRKRVYYLSLEFLIGRLFTDALNNMGLMKVFETALGDLGVGLMDL HHHHHHHCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH RKCEPDAALGNGGLGRLAACFMESMSTLQIPAIGYGIRYDFGLFRQVIVDGWQHEYPDVW HHCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEE LSFGNPWEFQRPEVVYHVHFGGGVEHVDDKGRDRAIWHPGETVQAVAYDTPIVGWRGQHV EECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCC NALRLWSARSPDPLKLDVFNSGDYLGASAEEARAEAICKFLYPNDESPAGRELRLRQEYF CEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHH FVSASLQDLVKRHLGSDGQLRSLAQKAAVQLNDTHPSLAVAELMRILVDLHNFRWDEAWK EEHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEE ITVATLSYTNHTLLPEALETWPVELFERLLPRHLEIIYRINAQHLALAEQRAPGDIDYRA EEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCCCCEE SVSLIDEKSGRRVRMGQLAFVGSHRINGVSAMHSDLMKETVFHDLNHLYSGRITNKTNGI EEEEEECCCCCEEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TFRRWLTLANPKLTSLLREACGDAIVDDPTLLTSLESYVADSGFHQKFRAVKHHNKVQLA EEEHEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH RLISERMNVRLDPSALFDVQIKRIHEYKRQLLNILEAVALYLDMKDDPQRDWVPRVKIFA HHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE GKAAASYRYAKLIIKLINDVAELVNNDPAIGGKLKVVFMADYNVSLAETIIPAADLSEQI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHH STAGMEASGTGNMKLALNGAITIGTLDGANIEIRDNVGADNIAIFGMEAGDVMLRRQQGL HHCCCCCCCCCCEEEEEECEEEEEECCCCCEEEECCCCCCCEEEEEECCCHHHHHHHCCC DATDVIRRSPRLGRAIDAIANGLFSPGEPGRFEPIAHALRHLDHYMVSADFDSYYEAQRG CHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHCC VDARWQSEPAWTRASILNVARMAWFSSDRTIREYADDIWNVPVGPVAAPAHAQRA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDQPSQRSFVSTGQPVDELAVAEIKSDILAKLRLAIGKEASQATQQDWYHAAALTLRDR CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IVHRWLTADKESYDAGRKRVYYLSLEFLIGRLFTDALNNMGLMKVFETALGDLGVGLMDL HHHHHHHCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH RKCEPDAALGNGGLGRLAACFMESMSTLQIPAIGYGIRYDFGLFRQVIVDGWQHEYPDVW HHCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEE LSFGNPWEFQRPEVVYHVHFGGGVEHVDDKGRDRAIWHPGETVQAVAYDTPIVGWRGQHV EECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCC NALRLWSARSPDPLKLDVFNSGDYLGASAEEARAEAICKFLYPNDESPAGRELRLRQEYF CEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHH FVSASLQDLVKRHLGSDGQLRSLAQKAAVQLNDTHPSLAVAELMRILVDLHNFRWDEAWK EEHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEE ITVATLSYTNHTLLPEALETWPVELFERLLPRHLEIIYRINAQHLALAEQRAPGDIDYRA EEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCCCCEE SVSLIDEKSGRRVRMGQLAFVGSHRINGVSAMHSDLMKETVFHDLNHLYSGRITNKTNGI EEEEEECCCCCEEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TFRRWLTLANPKLTSLLREACGDAIVDDPTLLTSLESYVADSGFHQKFRAVKHHNKVQLA EEEHEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH RLISERMNVRLDPSALFDVQIKRIHEYKRQLLNILEAVALYLDMKDDPQRDWVPRVKIFA HHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE GKAAASYRYAKLIIKLINDVAELVNNDPAIGGKLKVVFMADYNVSLAETIIPAADLSEQI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHH STAGMEASGTGNMKLALNGAITIGTLDGANIEIRDNVGADNIAIFGMEAGDVMLRRQQGL HHCCCCCCCCCCEEEEEECEEEEEECCCCCEEEECCCCCCCEEEEEECCCHHHHHHHCCC DATDVIRRSPRLGRAIDAIANGLFSPGEPGRFEPIAHALRHLDHYMVSADFDSYYEAQRG CHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHCC VDARWQSEPAWTRASILNVARMAWFSSDRTIREYADDIWNVPVGPVAAPAHAQRA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]