| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337804
Identifier: 146337804
GI number: 146337804
Start: 716684
End: 717721
Strand: Reverse
Name: 146337804
Synonym: BRADO0683
Alternate gene names: NA
Gene position: 717721-716684 (Counterclockwise)
Preceding gene: 146337807
Following gene: 146337792
Centisome position: 9.63
GC content: 64.35
Gene sequence:
>1038_bases ATGGCCGCAGTTTCGACCCCGGAACGCGAGGCATTTTACAAGAAGATCGACCGCGAGAACATGACCGCGCTCTGGACCGT GATGAGCGATCTCATCACGCCCGAGCCGAAGAGCGGCTGCCGCCCGCATCTGTGGCAGTTCGCTGCGATCCGGGACTACA TGATCGAGGCCGGGCGGCTGATCACGGCAAAGGAAGCCGAGCGGCGCGTGCTGATCCTGGAAAATCCGGGCCTGCGCGGC CAGTCCAAGATCACCACCTCGCTCTATGCCGGCATCCAGATGGTCATCCCCGGCGACATCGCCCCCGCCCATCGCCACAG CCAGTCGGCGCTGCGCTTCGTCCTGGAGGGCCAGGGCGCGTTCACGACGGTCGACGGCGAGCGCACCTTGATGCAGCCCG GTGATTTCATCATCACGCCGTCGATGACATGGCACGATCATGGCAACGAAACCGCGGAGCCGATGTTCTGGCTCGACGGC CTCGACATTCCCCTGGTGCAGTTCCTCGACGCGTCGTTCGCGCAAGGGTCGCAGGAGGATCAGCAGAAGGTCGCGCGTCC CGCCGGCGACAGCTTTGCCCGCTACGGTCACAATCTGCTTCCGGTCGACGCCAAGCGCAAATCGCGGACGTCGCCGATCT TCAACTATCCCTACGCCTACACGCGCGAGGCGCTTGAGAACGCCAAGCGCAGCGGGGAATGGGATGCGTGCCATGGGCTG AAGCTGAAGTTCTCCAATCCCGAGACCGGCGACTTCGCGATGCCGACGATCGGCACCTTCATCCAGCTCTTGCCGAAGGG GTTTGAAACCGCGCGCTATCGCTCGACGGACGCTACGGTGTTCACGGCGATCGAGGGTCGGGGGCGAAGCCGCATCGGCG ACGCGATCTTCGAATGGGGTCCACGCGACCTGTTCGTGGTGCCGAGCTGGCAATGGGTCACCCATGAGGCAGACCAGGAT GCCGTGCTGTTCTCGTTCTCCGACCGCCCGGTGCAGGAGAAGCTCGACCTGTTCCGCGAGGACCGTGGCAACGCGTGA
Upstream 100 bases:
>100_bases CGTGGCACTCCTCCTGAGTTGATATCTCTGGTTGCAATTGACGGTAGGCTAATTGACAGTATACTGTCAATCAACAACGA CATTTGATCGGGAGGCGCGC
Downstream 100 bases:
>100_bases TGCAGCCGATCAGCGCCAGTGCAGCCACCGCGCTTCGAGCAGGCTGATCAGTTTGCCGACGGCGAGGCCGAACAGCGACA GCATCAGAATGCCCGCCATC
Product: gentisate 1,2-dioxygenase
Products: maleylpyruvate
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase; Dioxygenase Oxidoreductase Protein; Dioxygenase
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MAAVSTPEREAFYKKIDRENMTALWTVMSDLITPEPKSGCRPHLWQFAAIRDYMIEAGRLITAKEAERRVLILENPGLRG QSKITTSLYAGIQMVIPGDIAPAHRHSQSALRFVLEGQGAFTTVDGERTLMQPGDFIITPSMTWHDHGNETAEPMFWLDG LDIPLVQFLDASFAQGSQEDQQKVARPAGDSFARYGHNLLPVDAKRKSRTSPIFNYPYAYTREALENAKRSGEWDACHGL KLKFSNPETGDFAMPTIGTFIQLLPKGFETARYRSTDATVFTAIEGRGRSRIGDAIFEWGPRDLFVVPSWQWVTHEADQD AVLFSFSDRPVQEKLDLFREDRGNA
Sequences:
>Translated_345_residues MAAVSTPEREAFYKKIDRENMTALWTVMSDLITPEPKSGCRPHLWQFAAIRDYMIEAGRLITAKEAERRVLILENPGLRG QSKITTSLYAGIQMVIPGDIAPAHRHSQSALRFVLEGQGAFTTVDGERTLMQPGDFIITPSMTWHDHGNETAEPMFWLDG LDIPLVQFLDASFAQGSQEDQQKVARPAGDSFARYGHNLLPVDAKRKSRTSPIFNYPYAYTREALENAKRSGEWDACHGL KLKFSNPETGDFAMPTIGTFIQLLPKGFETARYRSTDATVFTAIEGRGRSRIGDAIFEWGPRDLFVVPSWQWVTHEADQD AVLFSFSDRPVQEKLDLFREDRGNA >Mature_344_residues AAVSTPEREAFYKKIDRENMTALWTVMSDLITPEPKSGCRPHLWQFAAIRDYMIEAGRLITAKEAERRVLILENPGLRGQ SKITTSLYAGIQMVIPGDIAPAHRHSQSALRFVLEGQGAFTTVDGERTLMQPGDFIITPSMTWHDHGNETAEPMFWLDGL DIPLVQFLDASFAQGSQEDQQKVARPAGDSFARYGHNLLPVDAKRKSRTSPIFNYPYAYTREALENAKRSGEWDACHGLK LKFSNPETGDFAMPTIGTFIQLLPKGFETARYRSTDATVFTAIEGRGRSRIGDAIFEWGPRDLFVVPSWQWVTHEADQDA VLFSFSDRPVQEKLDLFREDRGNA
Specific function: Unknown
COG id: COG3435
COG function: function code Q; Gentisate 1,2-dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.13.11.4
Molecular weight: Translated: 38877; Mature: 38746
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSTPEREAFYKKIDRENMTALWTVMSDLITPEPKSGCRPHLWQFAAIRDYMIEAGRL CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCE ITAKEAERRVLILENPGLRGQSKITTSLYAGIQMVIPGDIAPAHRHSQSALRFVLEGQGA EEECCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHEEEEECCCC FTTVDGERTLMQPGDFIITPSMTWHDHGNETAEPMFWLDGLDIPLVQFLDASFAQGSQED EEEECCCEEEECCCCEEECCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHH QQKVARPAGDSFARYGHNLLPVDAKRKSRTSPIFNYPYAYTREALENAKRSGEWDACHGL HHHHHCCCCCHHHHHCCCEECCCCCHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCE KLKFSNPETGDFAMPTIGTFIQLLPKGFETARYRSTDATVFTAIEGRGRSRIGDAIFEWG EEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCC PRDLFVVPSWQWVTHEADQDAVLFSFSDRPVQEKLDLFREDRGNA CCCEEEECCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AAVSTPEREAFYKKIDRENMTALWTVMSDLITPEPKSGCRPHLWQFAAIRDYMIEAGRL CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCE ITAKEAERRVLILENPGLRGQSKITTSLYAGIQMVIPGDIAPAHRHSQSALRFVLEGQGA EEECCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHEEEEECCCC FTTVDGERTLMQPGDFIITPSMTWHDHGNETAEPMFWLDGLDIPLVQFLDASFAQGSQED EEEECCCEEEECCCCEEECCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHH QQKVARPAGDSFARYGHNLLPVDAKRKSRTSPIFNYPYAYTREALENAKRSGEWDACHGL HHHHHCCCCCHHHHHCCCEECCCCCHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCE KLKFSNPETGDFAMPTIGTFIQLLPKGFETARYRSTDATVFTAIEGRGRSRIGDAIFEWG EEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCC PRDLFVVPSWQWVTHEADQDAVLFSFSDRPVQEKLDLFREDRGNA CCCEEEECCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,5-dihydroxybenzoate; O2
Specific reaction: 2,5-dihydroxybenzoate + O2 = maleylpyruvate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA