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The map label for this gene is tsr [C]

Identifier: 146337799

GI number: 146337799

Start: 711053

End: 713068

Strand: Direct

Name: tsr [C]

Synonym: BRADO0678

Alternate gene names: 146337799

Gene position: 711053-713068 (Clockwise)

Preceding gene: 146337798

Following gene: 146337800

Centisome position: 9.54

GC content: 68.85

Gene sequence:

>2016_bases
ATGTCCTGGATCGGGGTCCGGCCGCGGATCTTCGGCGGCTTCGCGCTGATCCTGAGCTTTCTGGTGCTGCTCGGCGGCTT
CGCGATGAGCCAGGTCGGCCGCATTGGCGGCACGGTGGACGACCTCGTCGCCAGCGGTGCCGGCGACGCCGGCATGTCGC
AAGTGCGTGCCGCGCTGCTGACAGCCAACGGCGCAGTCGAAAAATTCATCCGCACCTGGAGCGTGGGCGACAAGGATGCC
GCCGGCAAGGCCATCGACTCGGTTGGCGGGCTTGCCGATGAGGTCGAAAAACAGTCCGGCCAACTGAAGGTGATCGCTGA
CGGCATCGGCTCGGTGCGCAGCGCGCTCGCGGCGTATCGCAGCGCCTTCGCAGCTGCCGCCGAGGCGGTCGACCGGCTGC
GCGCGGCGACCAACAAGACCGAGGCGCTCGGCGCTGTCGCCGGCGTCAATCTTGGCGGCATCCAGGTCGCGCTCGCCAAT
CGCTCCGGACGAGAGCCGCTGCTCAACCCGCTGCGGCTCGCGAGCGTCGTCGACGCCGCCCGCATCGCCGTGATGCGATA
TACGAACACGCTGTCTCCCAACGATGCCGAAGACGCGAGGCTTACCTTCGTCTACACAGGGCTTGCGCTCGCCGATTCCG
AAGCGGAGCTCGCAGGCGTCGAGGACGCCAAGCTGAAAAGCATGATCGCGGCGCTCAAGGACGCGCTGACCGCCGATGCG
GCGGCGCTCGAGGACGTGATCAAAATCGCAGCCGATCTGCGCGCCAAGCAGGCCGAGCTCGCGAAGGTGAGCGCGGCGAT
CGACGGGCAAGTCGGGCGGATCAATCAGCAGCTCGGTACGGCTCGTGGCGAGCAGGGCGCCAAGACCGCCGTGGCTGTCG
CGGACACCAGGCAGACCATCATCATCACCGCCGCCGGTGCGGTCGCGCTCGGCGCCGTGCTTGCCTGGCTGATCGGTGCC
AGCGTCTCCGGACCAATCCGCAGCATGACCGATCGAATGCAGTCGCTCGCCGCCGGCGAGTTGGAGCAGTCGATCCCGGG
CGGTACGCATCGCGATGAGATCGGGCGCATGGCACGCGCGGTCGAGATCTTCCGTGAAAACGCGCTGGCCGTTCGCCGCA
TGGAGCAGGAAGCCGCCTCGCAGCGCGAGGTCACCGAGGCTGAACGCGCCCGCATGATGGCTGATCTCGCCGGCCGTTTC
GAGCAGGGCATGCAGGGCGTGATCACTGGTGTCGGGGGCCGTGCCACCGACATGGGGCAAAGCGCAAGGGAGCTCGCGCA
AATCGCCGAGCGCGGCCGCGGACTGGCGGAGGCGGTGGCCAACCGGGCCGAGCAGGCTTCGGCGAACGTGCAGACGGTCG
CATCCGCCACCCAGGAACTCGCTGCGTCGATCCGCGAGATCTCCGGGCAGGTGCAGCGGTCGGTCACGGTGTCGACCCGC
GCGACGCATGAGACGCGGCGGACCTCGGAGCTGATCGACGGCCTCTCCAGCGCGGCCGAGCGGATCGGCACGATCGTGCA
GCTCATTCAGGCGATCGCGAGCCAGACGAATCTCCTCGCGCTCAACGCCACCATCGAGGCGGCGCGGGCTGGCGAGGCCG
GTCGGGGATTTGCGATCGTCGCGAGCGAGGTGAAGAACCTGGCGTCGCAGACGGCGCAGGCGACCGAGCAGATCTCCAGC
CAGATCGCCACGATCCAGAGTGCGACCGAGGAGACGGTCAGCGCAATCGCCCAGTTCGGCACCACGGTGCGCGAGATCGC
CGAAATCTCCAACGCGATCGCCGCCGCGGTCGAGCAGCAGGGCGCCGCGACCAGCGAGATTGCCCGCAACGTCGAGCAAG
CCGCCAGTGGCACCCAGGCCGTCACGCAGGAGATCGGCGATGTGCGCATGGTGGCCGGCCAGACCGATGCGGGAGCAGAG
GCCGCGCTCGCTGCCGCAGCCGCGCTGCAGCAGCAGGCGGCGTCGTTGCGGAGCAACGTTGCCGAGTTCCTGCAGACGAT
CCGGACCGCAGCCTGA

Upstream 100 bases:

>100_bases
TCGATCCCGAATTCGAGAAGCGCTTTGGCAAGGAGCTGCTCGCTACCATCAGGTCCACTCCGTGAAACAGACCGGCGATT
CCATGAAACTCTCTTCGTTG

Downstream 100 bases:

>100_bases
TATCGGGGCTGCGAGGCGTTGACGGTCGGGCGACTTCAGCCGCAAGCTGGCGCGATGACCGTTCTACAGCCACGCTCTCT
CAGCATTGCAGTCGGCGACG

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 671; Mature: 670

Protein sequence:

>671_residues
MSWIGVRPRIFGGFALILSFLVLLGGFAMSQVGRIGGTVDDLVASGAGDAGMSQVRAALLTANGAVEKFIRTWSVGDKDA
AGKAIDSVGGLADEVEKQSGQLKVIADGIGSVRSALAAYRSAFAAAAEAVDRLRAATNKTEALGAVAGVNLGGIQVALAN
RSGREPLLNPLRLASVVDAARIAVMRYTNTLSPNDAEDARLTFVYTGLALADSEAELAGVEDAKLKSMIAALKDALTADA
AALEDVIKIAADLRAKQAELAKVSAAIDGQVGRINQQLGTARGEQGAKTAVAVADTRQTIIITAAGAVALGAVLAWLIGA
SVSGPIRSMTDRMQSLAAGELEQSIPGGTHRDEIGRMARAVEIFRENALAVRRMEQEAASQREVTEAERARMMADLAGRF
EQGMQGVITGVGGRATDMGQSARELAQIAERGRGLAEAVANRAEQASANVQTVASATQELAASIREISGQVQRSVTVSTR
ATHETRRTSELIDGLSSAAERIGTIVQLIQAIASQTNLLALNATIEAARAGEAGRGFAIVASEVKNLASQTAQATEQISS
QIATIQSATEETVSAIAQFGTTVREIAEISNAIAAAVEQQGAATSEIARNVEQAASGTQAVTQEIGDVRMVAGQTDAGAE
AALAAAAALQQQAASLRSNVAEFLQTIRTAA

Sequences:

>Translated_671_residues
MSWIGVRPRIFGGFALILSFLVLLGGFAMSQVGRIGGTVDDLVASGAGDAGMSQVRAALLTANGAVEKFIRTWSVGDKDA
AGKAIDSVGGLADEVEKQSGQLKVIADGIGSVRSALAAYRSAFAAAAEAVDRLRAATNKTEALGAVAGVNLGGIQVALAN
RSGREPLLNPLRLASVVDAARIAVMRYTNTLSPNDAEDARLTFVYTGLALADSEAELAGVEDAKLKSMIAALKDALTADA
AALEDVIKIAADLRAKQAELAKVSAAIDGQVGRINQQLGTARGEQGAKTAVAVADTRQTIIITAAGAVALGAVLAWLIGA
SVSGPIRSMTDRMQSLAAGELEQSIPGGTHRDEIGRMARAVEIFRENALAVRRMEQEAASQREVTEAERARMMADLAGRF
EQGMQGVITGVGGRATDMGQSARELAQIAERGRGLAEAVANRAEQASANVQTVASATQELAASIREISGQVQRSVTVSTR
ATHETRRTSELIDGLSSAAERIGTIVQLIQAIASQTNLLALNATIEAARAGEAGRGFAIVASEVKNLASQTAQATEQISS
QIATIQSATEETVSAIAQFGTTVREIAEISNAIAAAVEQQGAATSEIARNVEQAASGTQAVTQEIGDVRMVAGQTDAGAE
AALAAAAALQQQAASLRSNVAEFLQTIRTAA
>Mature_670_residues
SWIGVRPRIFGGFALILSFLVLLGGFAMSQVGRIGGTVDDLVASGAGDAGMSQVRAALLTANGAVEKFIRTWSVGDKDAA
GKAIDSVGGLADEVEKQSGQLKVIADGIGSVRSALAAYRSAFAAAAEAVDRLRAATNKTEALGAVAGVNLGGIQVALANR
SGREPLLNPLRLASVVDAARIAVMRYTNTLSPNDAEDARLTFVYTGLALADSEAELAGVEDAKLKSMIAALKDALTADAA
ALEDVIKIAADLRAKQAELAKVSAAIDGQVGRINQQLGTARGEQGAKTAVAVADTRQTIIITAAGAVALGAVLAWLIGAS
VSGPIRSMTDRMQSLAAGELEQSIPGGTHRDEIGRMARAVEIFRENALAVRRMEQEAASQREVTEAERARMMADLAGRFE
QGMQGVITGVGGRATDMGQSARELAQIAERGRGLAEAVANRAEQASANVQTVASATQELAASIREISGQVQRSVTVSTRA
THETRRTSELIDGLSSAAERIGTIVQLIQAIASQTNLLALNATIEAARAGEAGRGFAIVASEVKNLASQTAQATEQISSQ
IATIQSATEETVSAIAQFGTTVREIAEISNAIAAAVEQQGAATSEIARNVEQAASGTQAVTQEIGDVRMVAGQTDAGAEA
ALAAAAALQQQAASLRSNVAEFLQTIRTAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=352, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1787690, Length=278, Percent_Identity=30.5755395683453, Blast_Score=97, Evalue=5e-21,
Organism=Escherichia coli, GI1788194, Length=247, Percent_Identity=33.6032388663968, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788195, Length=199, Percent_Identity=32.1608040201005, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=169, Percent_Identity=36.6863905325444, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 69088; Mature: 68957

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWIGVRPRIFGGFALILSFLVLLGGFAMSQVGRIGGTVDDLVASGAGDAGMSQVRAALL
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHH
TANGAVEKFIRTWSVGDKDAAGKAIDSVGGLADEVEKQSGQLKVIADGIGSVRSALAAYR
HCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
SAFAAAAEAVDRLRAATNKTEALGAVAGVNLGGIQVALANRSGREPLLNPLRLASVVDAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
RIAVMRYTNTLSPNDAEDARLTFVYTGLALADSEAELAGVEDAKLKSMIAALKDALTADA
HHHHHHHHCCCCCCCCCCCEEEEEEECHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH
AALEDVIKIAADLRAKQAELAKVSAAIDGQVGRINQQLGTARGEQGAKTAVAVADTRQTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEE
IITAAGAVALGAVLAWLIGASVSGPIRSMTDRMQSLAAGELEQSIPGGTHRDEIGRMARA
EEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VEIFRENALAVRRMEQEAASQREVTEAERARMMADLAGRFEQGMQGVITGVGGRATDMGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHCCH
SARELAQIAERGRGLAEAVANRAEQASANVQTVASATQELAASIREISGQVQRSVTVSTR
HHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHH
ATHETRRTSELIDGLSSAAERIGTIVQLIQAIASQTNLLALNATIEAARAGEAGRGFAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHH
ASEVKNLASQTAQATEQISSQIATIQSATEETVSAIAQFGTTVREIAEISNAIAAAVEQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAATSEIARNVEQAASGTQAVTQEIGDVRMVAGQTDAGAEAALAAAAALQQQAASLRSNV
CCHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEFLQTIRTAA
HHHHHHHHHCC
>Mature Secondary Structure 
SWIGVRPRIFGGFALILSFLVLLGGFAMSQVGRIGGTVDDLVASGAGDAGMSQVRAALL
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHH
TANGAVEKFIRTWSVGDKDAAGKAIDSVGGLADEVEKQSGQLKVIADGIGSVRSALAAYR
HCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
SAFAAAAEAVDRLRAATNKTEALGAVAGVNLGGIQVALANRSGREPLLNPLRLASVVDAA
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
RIAVMRYTNTLSPNDAEDARLTFVYTGLALADSEAELAGVEDAKLKSMIAALKDALTADA
HHHHHHHHCCCCCCCCCCCEEEEEEECHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH
AALEDVIKIAADLRAKQAELAKVSAAIDGQVGRINQQLGTARGEQGAKTAVAVADTRQTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEE
IITAAGAVALGAVLAWLIGASVSGPIRSMTDRMQSLAAGELEQSIPGGTHRDEIGRMARA
EEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VEIFRENALAVRRMEQEAASQREVTEAERARMMADLAGRFEQGMQGVITGVGGRATDMGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHCCH
SARELAQIAERGRGLAEAVANRAEQASANVQTVASATQELAASIREISGQVQRSVTVSTR
HHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHH
ATHETRRTSELIDGLSSAAERIGTIVQLIQAIASQTNLLALNATIEAARAGEAGRGFAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHH
ASEVKNLASQTAQATEQISSQIATIQSATEETVSAIAQFGTTVREIAEISNAIAAAVEQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAATSEIARNVEQAASGTQAVTQEIGDVRMVAGQTDAGAEAALAAAAALQQQAASLRSNV
CCHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEFLQTIRTAA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]