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The map label for this gene is mmgC [H]

Identifier: 146337775

GI number: 146337775

Start: 676548

End: 677705

Strand: Reverse

Name: mmgC [H]

Synonym: BRADO0652

Alternate gene names: 146337775

Gene position: 677705-676548 (Counterclockwise)

Preceding gene: 146337776

Following gene: 146337774

Centisome position: 9.09

GC content: 66.32

Gene sequence:

>1158_bases
ATGTCTGCGCTTCATTTCGATCCGATCCGTCTGCCGCCCGAATGCGAGGAGCTGCGCAAGGAGGTCCGTGCATTCCTGGC
CGAGGAGGTTGCCGCCGGCACGTTCAATCCCTATCAGCCGCTACGCGAGGACGCCGACGCACGCGAATTCTCCAGGCGCG
TTGGCGAGCGCGGCTGGATCGGCATGACCTGGCCGAAGAAATATGGCGGCCATGAGCGAACGTTCCTCGAGCGCTATGTC
GTGACCGAGGAGATGCGCGTCGCCAATGCGCCGGTGCGGCGCTTCTTCGTCGCCGACCGCCAGAGCGGGCCGATCCTGCT
GCGCTATGCTCCCGAACATATCAAGGCGGACATCCTGCCGCGCATCTGCCGCGGCGAGCTCTGCTTCGCGATCGGCATGA
GCGAGCCGAACTCCGGCTCCGACCTGTTCGCCGCCAAGACGCGCGCGACGAAGACCGATGGCGGCTGGCTGATCAACGGC
ACCAAGATCTGGACCACGTCGGCGCACATGGCCGACTACATGATCGCGATCTTCCGGACGTCGCCGGCGACCAAGGAGAA
CCGCAGGCACGGCCTGACGCAGTTCCTGGTCAACATGAAGTCGCCGGGCATCAAGGTGAATCCGATTGGCCAGATCACCG
GCCAGAAAGAGTTCAACGAGGTCGTCTTCACCGACGCTTTCGTGCCGGACGATCACCAGCTCGGGGAAATCGACGGCGCG
TGGAAACAGGCCACCTCCGAGCTCGCCTATGAGCGCTCCGGGCCGGAGCGCTTCCTGGAAACCTACTACGTTCTGACCGA
GCTGGTGCGCGCCGTCGGCCCCGATCCCGACACGCGCAGCGCCGAAGGCATCGGCCGCCTGGTGGCGCAGCTGCATGCGA
TGCGGCGCATGTCGGTCTCGGTCGCCGGCATGCTGCACGCCGGCAAGGAGCCGGTGGTCGAGGCGTCGATCGTCAAGGAC
GTCGGCACGGTGTGGGAGCAGCAGCTGCCGCACCGCGTGCGCGACCTCGCCGCCTTCGTCGAGGAGGACGCCGGCAACCG
TGAGACGCTGGAGAATCAGCTGACTTTCGCGATCCGCACCGCGCCCAAGCTGACCATCCAGGGCGGCACGACCGAGGTGC
TGCGCGGCATCATCGCGCGCGGGCTGGGGTTGCGTTAA

Upstream 100 bases:

>100_bases
CCATTGGGCCGTCGCCCTCGGCCAACGCGTCGCCGCCCGCGGCGCCGACGAATTGTGGCCGCTGGTCGCGTCACGCTGAG
CTGCACGGAAAGGATAGCCC

Downstream 100 bases:

>100_bases
CGGCTGGCGAAACGCCTCGGCGTGCACAACTACGTGGCTCCGTCATCGCGAGCGCAGCGAAGCGATCCAGGGCCATTCGC
ACCAATCTGGATTGCTTCGC

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSALHFDPIRLPPECEELRKEVRAFLAEEVAAGTFNPYQPLREDADAREFSRRVGERGWIGMTWPKKYGGHERTFLERYV
VTEEMRVANAPVRRFFVADRQSGPILLRYAPEHIKADILPRICRGELCFAIGMSEPNSGSDLFAAKTRATKTDGGWLING
TKIWTTSAHMADYMIAIFRTSPATKENRRHGLTQFLVNMKSPGIKVNPIGQITGQKEFNEVVFTDAFVPDDHQLGEIDGA
WKQATSELAYERSGPERFLETYYVLTELVRAVGPDPDTRSAEGIGRLVAQLHAMRRMSVSVAGMLHAGKEPVVEASIVKD
VGTVWEQQLPHRVRDLAAFVEEDAGNRETLENQLTFAIRTAPKLTIQGGTTEVLRGIIARGLGLR

Sequences:

>Translated_385_residues
MSALHFDPIRLPPECEELRKEVRAFLAEEVAAGTFNPYQPLREDADAREFSRRVGERGWIGMTWPKKYGGHERTFLERYV
VTEEMRVANAPVRRFFVADRQSGPILLRYAPEHIKADILPRICRGELCFAIGMSEPNSGSDLFAAKTRATKTDGGWLING
TKIWTTSAHMADYMIAIFRTSPATKENRRHGLTQFLVNMKSPGIKVNPIGQITGQKEFNEVVFTDAFVPDDHQLGEIDGA
WKQATSELAYERSGPERFLETYYVLTELVRAVGPDPDTRSAEGIGRLVAQLHAMRRMSVSVAGMLHAGKEPVVEASIVKD
VGTVWEQQLPHRVRDLAAFVEEDAGNRETLENQLTFAIRTAPKLTIQGGTTEVLRGIIARGLGLR
>Mature_384_residues
SALHFDPIRLPPECEELRKEVRAFLAEEVAAGTFNPYQPLREDADAREFSRRVGERGWIGMTWPKKYGGHERTFLERYVV
TEEMRVANAPVRRFFVADRQSGPILLRYAPEHIKADILPRICRGELCFAIGMSEPNSGSDLFAAKTRATKTDGGWLINGT
KIWTTSAHMADYMIAIFRTSPATKENRRHGLTQFLVNMKSPGIKVNPIGQITGQKEFNEVVFTDAFVPDDHQLGEIDGAW
KQATSELAYERSGPERFLETYYVLTELVRAVGPDPDTRSAEGIGRLVAQLHAMRRMSVSVAGMLHAGKEPVVEASIVKDV
GTVWEQQLPHRVRDLAAFVEEDAGNRETLENQLTFAIRTAPKLTIQGGTTEVLRGIIARGLGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=385, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI226958414, Length=348, Percent_Identity=27.2988505747126, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4501859, Length=337, Percent_Identity=26.1127596439169, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4501857, Length=253, Percent_Identity=28.4584980237154, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI4557233, Length=261, Percent_Identity=27.9693486590038, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI187960098, Length=349, Percent_Identity=24.0687679083095, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI4557231, Length=349, Percent_Identity=24.0687679083095, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI87081958, Length=166, Percent_Identity=27.710843373494, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=243, Percent_Identity=28.8065843621399, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=258, Percent_Identity=29.0697674418605, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=402, Percent_Identity=23.8805970149254, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17506239, Length=253, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=202, Percent_Identity=27.7227722772277, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=193, Percent_Identity=29.0155440414508, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=191, Percent_Identity=26.1780104712042, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=235, Percent_Identity=25.9574468085106, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17534899, Length=209, Percent_Identity=25.8373205741627, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17569725, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17505929, Length=191, Percent_Identity=25.130890052356, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21355753, Length=393, Percent_Identity=23.9185750636132, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24666513, Length=255, Percent_Identity=26.2745098039216, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21356377, Length=243, Percent_Identity=29.2181069958848, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24646207, Length=239, Percent_Identity=28.0334728033473, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24660351, Length=140, Percent_Identity=32.1428571428571, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363737, Length=295, Percent_Identity=26.7796610169492, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43091; Mature: 42960

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALHFDPIRLPPECEELRKEVRAFLAEEVAAGTFNPYQPLREDADAREFSRRVGERGWI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCE
GMTWPKKYGGHERTFLERYVVTEEMRVANAPVRRFFVADRQSGPILLRYAPEHIKADILP
ECCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCEEEEECHHHHHHHHHH
RICRGELCFAIGMSEPNSGSDLFAAKTRATKTDGGWLINGTKIWTTSAHMADYMIAIFRT
HHHCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCEEEECHHHHHHHHHHHEEC
SPATKENRRHGLTQFLVNMKSPGIKVNPIGQITGQKEFNEVVFTDAFVPDDHQLGEIDGA
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCHH
WKQATSELAYERSGPERFLETYYVLTELVRAVGPDPDTRSAEGIGRLVAQLHAMRRMSVS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VAGMLHAGKEPVVEASIVKDVGTVWEQQLPHRVRDLAAFVEEDAGNRETLENQLTFAIRT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEC
APKLTIQGGTTEVLRGIIARGLGLR
CCEEEECCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SALHFDPIRLPPECEELRKEVRAFLAEEVAAGTFNPYQPLREDADAREFSRRVGERGWI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCE
GMTWPKKYGGHERTFLERYVVTEEMRVANAPVRRFFVADRQSGPILLRYAPEHIKADILP
ECCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCEEEEECHHHHHHHHHH
RICRGELCFAIGMSEPNSGSDLFAAKTRATKTDGGWLINGTKIWTTSAHMADYMIAIFRT
HHHCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCEEEECHHHHHHHHHHHEEC
SPATKENRRHGLTQFLVNMKSPGIKVNPIGQITGQKEFNEVVFTDAFVPDDHQLGEIDGA
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCHH
WKQATSELAYERSGPERFLETYYVLTELVRAVGPDPDTRSAEGIGRLVAQLHAMRRMSVS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VAGMLHAGKEPVVEASIVKDVGTVWEQQLPHRVRDLAAFVEEDAGNRETLENQLTFAIRT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEC
APKLTIQGGTTEVLRGIIARGLGLR
CCEEEECCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]