| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337768
Identifier: 146337768
GI number: 146337768
Start: 668491
End: 669675
Strand: Direct
Name: 146337768
Synonym: BRADO0645
Alternate gene names: NA
Gene position: 668491-669675 (Clockwise)
Preceding gene: 146337765
Following gene: 146337769
Centisome position: 8.97
GC content: 66.08
Gene sequence:
>1185_bases GTGCTGGCCGCGGCGCTGACGCTGTCGGCCACCGCGGCGCTGGCGCAGAGCAAGCCGCCGCTGAAGATCGGCGGCATTCT CGACATGTCGAGCCTCTACGCCGACATCACGGGCCCCGGCAGCGAGGCCGCGGCGAAGATGGCGGTCGAGGATTTCGGCG GCGAGGTGCTGGGACGCAAGATCGAGGTGATCGCGGCCGACCATCTCAACAAGGCCGATCTCGCCGCCAACATCGCGCGC GACATGCTCGACAATCAGGGCGTCGAGATGATCTGGGACGTCGCGGCCTCGGCCACCGCGCTCGCCGCCGGCGAGATCGC CAAGGCGCGTAACAAGATCATCATCTTCAACGGCCCGGGCTCTGTGCGCCTCTCCAACGAGGCCTGCGGCCCGTACACCG TGCACTACGTCTTCGACACGTTTGCGCAGGCCAACGTCACCGGCCTCGCGGCCGTGAAGTCCGGCCTCGACAGCTGGTTC TTCCTCACCGCCGACTACGCGTTCGGCCAGGACCTCGAGAAGGACACCAGCGCGGTGGTGGTGAAGTCGGGCGGCAAGGT GCTCGGCAGCGTGCGCCATCCGCTCAACACCTCGGACTTCTCCTCATTCCTGCTGCAGGCCCAGGCCTCCAAGGCCAAGG TGATCGGGCTCGCCAATGCCGGCGGCGACACCATCAACGCGATCAAGCAGGCGGCGGAGTTCGGCATCAGCAAGAGCGGC CAGAAGCTGTCGCCGCTGCTCGCCTTCGTCTCCGACATCGACAGCGTCGGGCTGGAGACGGCGCAGGGGCTCCTGGTGGC GGAAGCGTTTTATTGGGATCTCAACGACGACACCCGCGCCTTCACCAAGCGTTTCATGGAGCGCACCAGGCGCGTGCCGA CCTCTGCGCAGGCCGGCGTGTATTCCTCGGTGACGCACTATCTCCAGGCCGTGAAGGCCGCGGGCACCACCGATCCCGAC GCCGTCATGAAGCTGATGCGCGCGACCCCGATCAACGACATGTTCGCGAAGGGCGGGCGGATCCGCGAGGACGGCCGGAT GGTGCACGACATGTATCTGTTCGAGGTGAAGAAGCCGTCGGAGTCCAAGGGCAAATCCGACGACTACAAGCTGCTCGCGA CCGTGCCAGGCAACGAGGCGTTCCAGTCGCTGGAGTTGTCGCGTTGTCCGCTGGTGAAGAAATGA
Upstream 100 bases:
>100_bases TGATGTCAACTATCAACGAGGCCGTCGCCACGCAGCGGCGTGCCCGGCTGGGAGGATATCGATGAGCAGATCCATTCGCG GCGCGGCAGCGTCATTGATC
Downstream 100 bases:
>100_bases CCTTTGGACGGCCGTGGAGCGGGTCCGCCCACGGCTTCCGTCGTTCCGGGGCAACGCGCCAGCGTTGAACCCGGAGCCTC GACATGAGTCCATCATCTCG
Product: putative ABC transporter substrate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLAAALTLSATAALAQSKPPLKIGGILDMSSLYADITGPGSEAAAKMAVEDFGGEVLGRKIEVIAADHLNKADLAANIAR DMLDNQGVEMIWDVAASATALAAGEIAKARNKIIIFNGPGSVRLSNEACGPYTVHYVFDTFAQANVTGLAAVKSGLDSWF FLTADYAFGQDLEKDTSAVVVKSGGKVLGSVRHPLNTSDFSSFLLQAQASKAKVIGLANAGGDTINAIKQAAEFGISKSG QKLSPLLAFVSDIDSVGLETAQGLLVAEAFYWDLNDDTRAFTKRFMERTRRVPTSAQAGVYSSVTHYLQAVKAAGTTDPD AVMKLMRATPINDMFAKGGRIREDGRMVHDMYLFEVKKPSESKGKSDDYKLLATVPGNEAFQSLELSRCPLVKK
Sequences:
>Translated_394_residues MLAAALTLSATAALAQSKPPLKIGGILDMSSLYADITGPGSEAAAKMAVEDFGGEVLGRKIEVIAADHLNKADLAANIAR DMLDNQGVEMIWDVAASATALAAGEIAKARNKIIIFNGPGSVRLSNEACGPYTVHYVFDTFAQANVTGLAAVKSGLDSWF FLTADYAFGQDLEKDTSAVVVKSGGKVLGSVRHPLNTSDFSSFLLQAQASKAKVIGLANAGGDTINAIKQAAEFGISKSG QKLSPLLAFVSDIDSVGLETAQGLLVAEAFYWDLNDDTRAFTKRFMERTRRVPTSAQAGVYSSVTHYLQAVKAAGTTDPD AVMKLMRATPINDMFAKGGRIREDGRMVHDMYLFEVKKPSESKGKSDDYKLLATVPGNEAFQSLELSRCPLVKK >Mature_394_residues MLAAALTLSATAALAQSKPPLKIGGILDMSSLYADITGPGSEAAAKMAVEDFGGEVLGRKIEVIAADHLNKADLAANIAR DMLDNQGVEMIWDVAASATALAAGEIAKARNKIIIFNGPGSVRLSNEACGPYTVHYVFDTFAQANVTGLAAVKSGLDSWF FLTADYAFGQDLEKDTSAVVVKSGGKVLGSVRHPLNTSDFSSFLLQAQASKAKVIGLANAGGDTINAIKQAAEFGISKSG QKLSPLLAFVSDIDSVGLETAQGLLVAEAFYWDLNDDTRAFTKRFMERTRRVPTSAQAGVYSSVTHYLQAVKAAGTTDPD AVMKLMRATPINDMFAKGGRIREDGRMVHDMYLFEVKKPSESKGKSDDYKLLATVPGNEAFQSLELSRCPLVKK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41884; Mature: 41884
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAALTLSATAALAQSKPPLKIGGILDMSSLYADITGPGSEAAAKMAVEDFGGEVLGRK CCEEHHHHHHHHHHHCCCCCEEECCEEEHHHHHEECCCCCHHHHHHHHHHHHCHHHHCCE IEVIAADHLNKADLAANIARDMLDNQGVEMIWDVAASATALAAGEIAKARNKIIIFNGPG EEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC SVRLSNEACGPYTVHYVFDTFAQANVTGLAAVKSGLDSWFFLTADYAFGQDLEKDTSAVV CEEECCCCCCCEEEEHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCEEE VKSGGKVLGSVRHPLNTSDFSSFLLQAQASKAKVIGLANAGGDTINAIKQAAEFGISKSG EECCCHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCC QKLSPLLAFVSDIDSVGLETAQGLLVAEAFYWDLNDDTRAFTKRFMERTRRVPTSAQAGV CHHHHHHHHHHHHHHHCHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCH YSSVTHYLQAVKAAGTTDPDAVMKLMRATPINDMFAKGGRIREDGRMVHDMYLFEVKKPS HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEEEEECCCC ESKGKSDDYKLLATVPGNEAFQSLELSRCPLVKK CCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MLAAALTLSATAALAQSKPPLKIGGILDMSSLYADITGPGSEAAAKMAVEDFGGEVLGRK CCEEHHHHHHHHHHHCCCCCEEECCEEEHHHHHEECCCCCHHHHHHHHHHHHCHHHHCCE IEVIAADHLNKADLAANIARDMLDNQGVEMIWDVAASATALAAGEIAKARNKIIIFNGPG EEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC SVRLSNEACGPYTVHYVFDTFAQANVTGLAAVKSGLDSWFFLTADYAFGQDLEKDTSAVV CEEECCCCCCCEEEEHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCEEE VKSGGKVLGSVRHPLNTSDFSSFLLQAQASKAKVIGLANAGGDTINAIKQAAEFGISKSG EECCCHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCC QKLSPLLAFVSDIDSVGLETAQGLLVAEAFYWDLNDDTRAFTKRFMERTRRVPTSAQAGV CHHHHHHHHHHHHHHHCHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCH YSSVTHYLQAVKAAGTTDPDAVMKLMRATPINDMFAKGGRIREDGRMVHDMYLFEVKKPS HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEEEEECCCC ESKGKSDDYKLLATVPGNEAFQSLELSRCPLVKK CCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA