| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337662
Identifier: 146337662
GI number: 146337662
Start: 536945
End: 538129
Strand: Reverse
Name: 146337662
Synonym: BRADO0528
Alternate gene names: NA
Gene position: 538129-536945 (Counterclockwise)
Preceding gene: 146337663
Following gene: 146337661
Centisome position: 7.22
GC content: 61.35
Gene sequence:
>1185_bases TTGGCCGCCACCCTCTCCGTCACGTCAGCCCAGGCCCAGAAGAAATACGATCCCGGCGCGTCCGACACCGAGATCAAGAT CGGCCAGACCGTGCCGTTCTCGGGTCCCGCCTCGGCCTATGCCTCGATCGGCAAGACCCAGGCCGCCTATTTCAACATGA TCAACGAGCAGGGCGGCATCAACGGCCGCAAGATCAAGCTGATCCAGTATGACGACGCCTACTCGCCGCCCAAGGCCGTG GAACAGGTGCGCAAGCTGGTCGAGGACGACGAGGTGCTGCTGACGTTCCAGATCATCGGCACGCCGTCCAACGCCGCGGT CCAGAAATACCTCAACGCCAAGAAGGTGCCGCAGCTGTTCGCGGCGACCGGCGCCACCAAGTTCACCGATCCAAAGAACT TTCCCTGGACCATGGGGTACAATCCCAACTACTTCACCGAGGGGCGTATCTACGGCCAGTACATTCTGAAGGAGCACCCC AACGCCAAGATCGGCGTGCTCTATCAGAACGACGATCTCGGCAAGGACTATCTCAACGGCATCAAGGCCGATCTCGGCGA CAAGGGCTCGATGATCGTCGCCGAAGCGTCCTACGAAGTCTCCGACCCGACGATCGACTCGCAGCTGCTCAAGATCAAGT CGGCCGGCGCCGACCTGCTATTCTCGGCCGCGACGCCGAAGCAGGCCGCGCAGGCGATCAAGAAGCTGCACGAGCTCGAC TGGCACCCCGTGCACATCGTCGACATCAATGCGACGTCCGTCGGTGCAGTACTGCAGCCCGCCGGGCTGGACGCATCGAA GGGCGTGATCTCGGTCAACTACGGCAAGGACCCGCTCGATCCGCAGTGGAAGGACGATCCGGGCATGAAGCGCTATTTCG AGTTCATGGCCAAGTACTATCCGGACGGCGACAAGAACTCGAACTTCAACACCTACGGCTACGGCAATGCCGAGCTGCTC GTAACCATCTTGAAGATGTGCGGCGACAATCTCACCCGCGAGAACGTCATGAAGCAGGCGGCGTCGCTGAAGGACGTCGT CGGCGACCTGTCGCTGCCGGGCATGAAGATCAACACCTCGCCGACCGACTACCGCGTCAACAAGCAGCTGCAGATGATGA AGTTCAACGGCGAACGCTGGGAACTGTTCGGCCCGATCCTGGAGGACAAGGGCCCGGCGGGTTAG
Upstream 100 bases:
>100_bases CCAGCGATGGCGCCCTCGGGGCAGACCAGCCGCACAAAACATCAGGAGGAACGCTCACCCCATGCGACAGGGAATTTTCC GTCTTGCCGGCGCGGCCGCG
Downstream 100 bases:
>100_bases TTCGGCTGACGGTCTCGGCGCCTGCCCTCGACTTTCGACCCCCCATGGTGAGGAGCGCCGCGCCCATCAGCTCGCTATTG CGAAAACAACAAGCCCGCGG
Product: putative branched-chain amino acid ABC transporter periplasmic binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MAATLSVTSAQAQKKYDPGASDTEIKIGQTVPFSGPASAYASIGKTQAAYFNMINEQGGINGRKIKLIQYDDAYSPPKAV EQVRKLVEDDEVLLTFQIIGTPSNAAVQKYLNAKKVPQLFAATGATKFTDPKNFPWTMGYNPNYFTEGRIYGQYILKEHP NAKIGVLYQNDDLGKDYLNGIKADLGDKGSMIVAEASYEVSDPTIDSQLLKIKSAGADLLFSAATPKQAAQAIKKLHELD WHPVHIVDINATSVGAVLQPAGLDASKGVISVNYGKDPLDPQWKDDPGMKRYFEFMAKYYPDGDKNSNFNTYGYGNAELL VTILKMCGDNLTRENVMKQAASLKDVVGDLSLPGMKINTSPTDYRVNKQLQMMKFNGERWELFGPILEDKGPAG
Sequences:
>Translated_394_residues MAATLSVTSAQAQKKYDPGASDTEIKIGQTVPFSGPASAYASIGKTQAAYFNMINEQGGINGRKIKLIQYDDAYSPPKAV EQVRKLVEDDEVLLTFQIIGTPSNAAVQKYLNAKKVPQLFAATGATKFTDPKNFPWTMGYNPNYFTEGRIYGQYILKEHP NAKIGVLYQNDDLGKDYLNGIKADLGDKGSMIVAEASYEVSDPTIDSQLLKIKSAGADLLFSAATPKQAAQAIKKLHELD WHPVHIVDINATSVGAVLQPAGLDASKGVISVNYGKDPLDPQWKDDPGMKRYFEFMAKYYPDGDKNSNFNTYGYGNAELL VTILKMCGDNLTRENVMKQAASLKDVVGDLSLPGMKINTSPTDYRVNKQLQMMKFNGERWELFGPILEDKGPAG >Mature_393_residues AATLSVTSAQAQKKYDPGASDTEIKIGQTVPFSGPASAYASIGKTQAAYFNMINEQGGINGRKIKLIQYDDAYSPPKAVE QVRKLVEDDEVLLTFQIIGTPSNAAVQKYLNAKKVPQLFAATGATKFTDPKNFPWTMGYNPNYFTEGRIYGQYILKEHPN AKIGVLYQNDDLGKDYLNGIKADLGDKGSMIVAEASYEVSDPTIDSQLLKIKSAGADLLFSAATPKQAAQAIKKLHELDW HPVHIVDINATSVGAVLQPAGLDASKGVISVNYGKDPLDPQWKDDPGMKRYFEFMAKYYPDGDKNSNFNTYGYGNAELLV TILKMCGDNLTRENVMKQAASLKDVVGDLSLPGMKINTSPTDYRVNKQLQMMKFNGERWELFGPILEDKGPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43178; Mature: 43047
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATLSVTSAQAQKKYDPGASDTEIKIGQTVPFSGPASAYASIGKTQAAYFNMINEQGGI CCEEEEEHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCC NGRKIKLIQYDDAYSPPKAVEQVRKLVEDDEVLLTFQIIGTPSNAAVQKYLNAKKVPQLF CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH AATGATKFTDPKNFPWTMGYNPNYFTEGRIYGQYILKEHPNAKIGVLYQNDDLGKDYLNG HHCCCCCCCCCCCCCEEECCCCCEEECCEEEEEEHHHCCCCCEEEEEECCCCCCHHHHHH IKADLGDKGSMIVAEASYEVSDPTIDSQLLKIKSAGADLLFSAATPKQAAQAIKKLHELD HHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCC WHPVHIVDINATSVGAVLQPAGLDASKGVISVNYGKDPLDPQWKDDPGMKRYFEFMAKYY CCCEEEEEECCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHC PDGDKNSNFNTYGYGNAELLVTILKMCGDNLTRENVMKQAASLKDVVGDLSLPGMKINTS CCCCCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC PTDYRVNKQLQMMKFNGERWELFGPILEDKGPAG CCCEEECCEEEEEEECCCEEEEECCHHCCCCCCC >Mature Secondary Structure AATLSVTSAQAQKKYDPGASDTEIKIGQTVPFSGPASAYASIGKTQAAYFNMINEQGGI CEEEEEHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCC NGRKIKLIQYDDAYSPPKAVEQVRKLVEDDEVLLTFQIIGTPSNAAVQKYLNAKKVPQLF CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH AATGATKFTDPKNFPWTMGYNPNYFTEGRIYGQYILKEHPNAKIGVLYQNDDLGKDYLNG HHCCCCCCCCCCCCCEEECCCCCEEECCEEEEEEHHHCCCCCEEEEEECCCCCCHHHHHH IKADLGDKGSMIVAEASYEVSDPTIDSQLLKIKSAGADLLFSAATPKQAAQAIKKLHELD HHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCC WHPVHIVDINATSVGAVLQPAGLDASKGVISVNYGKDPLDPQWKDDPGMKRYFEFMAKYY CCCEEEEEECCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHC PDGDKNSNFNTYGYGNAELLVTILKMCGDNLTRENVMKQAASLKDVVGDLSLPGMKINTS CCCCCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC PTDYRVNKQLQMMKFNGERWELFGPILEDKGPAG CCCEEECCEEEEEEECCCEEEEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA